BLASTX nr result

ID: Dioscorea21_contig00021825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021825
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vin...   177   4e-42
ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein ...   175   1e-41
ref|XP_002510246.1| zinc finger protein, putative [Ricinus commu...   171   2e-40
ref|XP_004152732.1| PREDICTED: diphthamide biosynthesis protein ...   171   3e-40
ref|NP_001062029.1| Os08g0474600 [Oryza sativa Japonica Group] g...   168   2e-39

>ref|XP_002283454.1| PREDICTED: DPH4 homolog isoform 3 [Vitis vinifera]
           gi|225432794|ref|XP_002283447.1| PREDICTED: DPH4 homolog
           isoform 2 [Vitis vinifera]
           gi|225432796|ref|XP_002283441.1| PREDICTED: DPH4 homolog
           isoform 1 [Vitis vinifera]
          Length = 182

 Score =  177 bits (448), Expect = 4e-42
 Identities = 90/163 (55%), Positives = 116/163 (71%)
 Frame = -1

Query: 723 THYQILSVKEDANYDEIRAGYKAAILNSHPDKLHMNPKESQLDHELQEVFLSVQKAWEVL 544
           T+Y ILSVKEDA+Y+EIR  Y++AILNSHPDKL    + S  D E  + FL +QKAWE L
Sbjct: 11  TYYDILSVKEDASYEEIRGCYRSAILNSHPDKLQKTTETSNTDPESGDRFLKIQKAWETL 70

Query: 543 SDTTSRANYDMELQSSRQKLEAVADEVTLEEMTIETIGDAQEFFYQCRCGDYFSVTASEL 364
           SD  SRA YD  LQ+SRQ   A A++++LE+MTIE  G   E FYQCRCGDYFSV +SEL
Sbjct: 71  SDPRSRAVYDSGLQASRQD-TATAEDLSLEDMTIEDDGKVLELFYQCRCGDYFSVDSSEL 129

Query: 363 DEIGLPLNINGDEASQSATGLQPAAVLLPCGSCSLKIRLILHS 235
            E+G  +  +G + S       PA+ +LPCGSCSLK+RL++++
Sbjct: 130 GEMGYAVFRDGSKISLQTPDSLPASFILPCGSCSLKVRLLINA 172


>ref|XP_003538970.1| PREDICTED: diphthamide biosynthesis protein 4-like [Glycine max]
          Length = 178

 Score =  175 bits (444), Expect = 1e-41
 Identities = 91/175 (52%), Positives = 124/175 (70%), Gaps = 2/175 (1%)
 Frame = -1

Query: 756 MLLDSCNLTGTTHYQILSVKEDANYDEIRAGYKAAILNSHPDKLHMNPKESQLDHELQEV 577
           MLLD  N T  THY++L+VKEDANY+EIRA Y++A+L+ HPDKL    + S  +   +E 
Sbjct: 1   MLLDK-NDTQETHYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETSSSNQTAEER 59

Query: 576 FLSVQKAWEVLSDTTSRANYDMELQSSRQKLEA--VADEVTLEEMTIETIGDAQEFFYQC 403
           FL VQKAWE+LS+++SR+ YD +L+SSRQ + A  VA++++L++M IE  G+A E FYQC
Sbjct: 60  FLKVQKAWEILSNSSSRSFYDNDLRSSRQDVLAADVAEDLSLQDMMIEDDGEALELFYQC 119

Query: 402 RCGDYFSVTASELDEIGLPLNINGDEASQSATGLQPAAVLLPCGSCSLKIRLILH 238
           RCGDYFSV + EL  +G  L   G   S       P +V+LPCGSCSLK RL+++
Sbjct: 120 RCGDYFSVDSLELKNMGYSLLREGSGISIMNVDTSPGSVILPCGSCSLKARLLIN 174


>ref|XP_002510246.1| zinc finger protein, putative [Ricinus communis]
           gi|223550947|gb|EEF52433.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 182

 Score =  171 bits (433), Expect = 2e-40
 Identities = 88/163 (53%), Positives = 117/163 (71%)
 Frame = -1

Query: 723 THYQILSVKEDANYDEIRAGYKAAILNSHPDKLHMNPKESQLDHELQEVFLSVQKAWEVL 544
           THY ILSVKEDA+Y+EIR  Y+ ++LN HPDKL    + S    EL + FL VQKAW+VL
Sbjct: 11  THYDILSVKEDASYEEIRTSYRLSLLNHHPDKLQSAHRTSDPQDELGDRFLKVQKAWKVL 70

Query: 543 SDTTSRANYDMELQSSRQKLEAVADEVTLEEMTIETIGDAQEFFYQCRCGDYFSVTASEL 364
            D  SRA YD EL++ R K   VA++V+LE+M IE  G+A E FYQCRCGDYFSV + EL
Sbjct: 71  GDARSRAIYDNELRALR-KDTGVAEDVSLEDMMIEDGGEALELFYQCRCGDYFSVDSLEL 129

Query: 363 DEIGLPLNINGDEASQSATGLQPAAVLLPCGSCSLKIRLILHS 235
            ++G  L  + ++ S   T + PA+VLLPCGSCSL++RL++++
Sbjct: 130 GKMGYILLRDENKISFETTDVSPASVLLPCGSCSLQVRLLINA 172


>ref|XP_004152732.1| PREDICTED: diphthamide biosynthesis protein 4-like [Cucumis
           sativus] gi|449496015|ref|XP_004160012.1| PREDICTED:
           diphthamide biosynthesis protein 4-like [Cucumis
           sativus]
          Length = 173

 Score =  171 bits (432), Expect = 3e-40
 Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 1/166 (0%)
 Frame = -1

Query: 729 GTTHYQILSVKEDANYDEIRAGYKAAILNSHPDKLHMNPKESQLDHELQEVFLSVQKAWE 550
           G T+Y +LS++EDA++DEIRA Y++A+LN HPDKL     +S  D  + E +  VQKAWE
Sbjct: 9   GETYYDVLSLREDASFDEIRASYRSALLNFHPDKLQAMCHKSHPDDIMGERYFKVQKAWE 68

Query: 549 VLSDTTSRANYDMELQSSRQKLEAV-ADEVTLEEMTIETIGDAQEFFYQCRCGDYFSVTA 373
           VL  + SRA+YD ELQ++  K +A+ A+ ++LE+M +E  G+  E  YQCRCGDYF + +
Sbjct: 69  VLGSSKSRASYDRELQAA--KGDAIGAESISLEDMVVEDKGEVVELLYQCRCGDYFFIDS 126

Query: 372 SELDEIGLPLNINGDEASQSATGLQPAAVLLPCGSCSLKIRLILHS 235
            ELDE+G PL  NG + S       PA+V+LPCGSCSLK+RL++ S
Sbjct: 127 GELDEMGYPLLRNGSKVSLRTLNALPASVVLPCGSCSLKVRLLIDS 172


>ref|NP_001062029.1| Os08g0474600 [Oryza sativa Japonica Group]
           gi|113623998|dbj|BAF23943.1| Os08g0474600 [Oryza sativa
           Japonica Group] gi|125561880|gb|EAZ07328.1| hypothetical
           protein OsI_29577 [Oryza sativa Indica Group]
           gi|215715377|dbj|BAG95128.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222640722|gb|EEE68854.1| hypothetical protein
           OsJ_27653 [Oryza sativa Japonica Group]
          Length = 174

 Score =  168 bits (425), Expect = 2e-39
 Identities = 89/177 (50%), Positives = 122/177 (68%), Gaps = 4/177 (2%)
 Frame = -1

Query: 756 MLLDSCNLTGTTHYQILSVKEDANYDEIRAGYKAAILNSHPDKLHMNPKESQLDHELQEV 577
           M L S   T  THY++LSV E A YDE+RAGY+AAILN+HPDK      +++LD  +  V
Sbjct: 1   MPLSSNISTQKTHYEVLSVNEGATYDEVRAGYRAAILNAHPDK-----SQAKLDSLVSSV 55

Query: 576 ----FLSVQKAWEVLSDTTSRANYDMELQSSRQKLEAVADEVTLEEMTIETIGDAQEFFY 409
               F SVQKAWEVL D  SR  YD +LQ+SRQ    +A E+ +EEMT+E+ GDA E  Y
Sbjct: 56  EHGEFFSVQKAWEVLRDPKSRTEYDKQLQTSRQNSANIAYEIEIEEMTVESTGDAMELMY 115

Query: 408 QCRCGDYFSVTASELDEIGLPLNINGDEASQSATGLQPAAVLLPCGSCSLKIRLILH 238
            CRCGD+FS+ +S+L E+G+ ++ +G+   QS+  +  A+V+L CGSCSLK RL+++
Sbjct: 116 PCRCGDHFSILSSDLAEMGILVDDDGEIYFQSSDCVS-ASVVLSCGSCSLKTRLVIN 171


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