BLASTX nr result

ID: Dioscorea21_contig00021799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021799
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24870.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makor...    86   2e-15
ref|NP_001057505.1| Os06g0318700 [Oryza sativa Japonica Group] g...    86   3e-15
ref|XP_003563906.1| PREDICTED: E3 ubiquitin-protein ligase makor...    86   3e-15
gb|EEC80498.1| hypothetical protein OsI_22743 [Oryza sativa Indi...    85   7e-15

>emb|CBI24870.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   TSCFYKHAYRDGRLEEVVLRHLDAEDGNIVIAKNIRLSDFLSDLHI 140
           TSCFYKHAYRDGRLEEVVLRHL AEDG+++IAKNIRLSDFL  LHI
Sbjct: 63  TSCFYKHAYRDGRLEEVVLRHLGAEDGHVMIAKNIRLSDFLGGLHI 108


>ref|XP_002279882.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Vitis
           vinifera]
          Length = 361

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   TSCFYKHAYRDGRLEEVVLRHLDAEDGNIVIAKNIRLSDFLSDLHI 140
           TSCFYKHAYRDGRLEEVVLRHL AEDG+++IAKNIRLSDFL  LHI
Sbjct: 315 TSCFYKHAYRDGRLEEVVLRHLGAEDGHVMIAKNIRLSDFLGGLHI 360


>ref|NP_001057505.1| Os06g0318700 [Oryza sativa Japonica Group]
           gi|75322005|sp|Q5ZA07.1|C3H41_ORYSJ RecName: Full=E3
           ubiquitin-protein ligase makorin; AltName: Full=Zinc
           finger CCCH domain-containing protein 41; Short=OsC3H41
           gi|54290513|dbj|BAD61579.1| putative makorin RING finger
           protein [Oryza sativa Japonica Group]
           gi|54290921|dbj|BAD61603.1| putative makorin RING finger
           protein [Oryza sativa Japonica Group]
           gi|113595545|dbj|BAF19419.1| Os06g0318700 [Oryza sativa
           Japonica Group] gi|215767707|dbj|BAG99935.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635474|gb|EEE65606.1| hypothetical protein
           OsJ_21146 [Oryza sativa Japonica Group]
          Length = 368

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   TSCFYKHAYRDGRLEEVVLRHLDAEDGNIVIAKNIRLSDFLSDLHI 140
           +SCFYKHAYRDGRLEEV+LRHLDA+DG+ VIAKNIRLSDFLS LH+
Sbjct: 323 SSCFYKHAYRDGRLEEVILRHLDADDGSTVIAKNIRLSDFLSRLHL 368


>ref|XP_003563906.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Brachypodium
           distachyon]
          Length = 383

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +3

Query: 3   TSCFYKHAYRDGRLEEVVLRHLDAEDGNIVIAKNIRLSDFLSDLHI 140
           TSCFYKHAYRDGRLEEV+LRHLDAEDG  +IAKNIRLSDFL+ LH+
Sbjct: 338 TSCFYKHAYRDGRLEEVILRHLDAEDGTTLIAKNIRLSDFLTRLHL 383


>gb|EEC80498.1| hypothetical protein OsI_22743 [Oryza sativa Indica Group]
          Length = 368

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   TSCFYKHAYRDGRLEEVVLRHLDAEDGNIVIAKNIRLSDFLSDLHI 140
           +SCFYKHAY+DGRLEEV+LRHLDA+DG+ VIAKNIRLSDFLS LH+
Sbjct: 323 SSCFYKHAYKDGRLEEVILRHLDADDGSTVIAKNIRLSDFLSRLHL 368


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