BLASTX nr result

ID: Dioscorea21_contig00021761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021761
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...    83   3e-27
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    82   2e-26
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    82   2e-26
ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    82   2e-26
gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays]         84   2e-26

>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
            gi|223535482|gb|EEF37151.1| ubiquitin protein ligase E3a,
            putative [Ricinus communis]
          Length = 1561

 Score = 82.8 bits (203), Expect(2) = 3e-27
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 368  VDMDLPSVMTCANYVKLPAYSSKEHMKERLLYAITEGQGSFHLS 237
            VD DLPSVMTCANY+KLP YSSKE MKE+LLYAITEGQGSFHLS
Sbjct: 1518 VDADLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHLS 1561



 Score = 64.3 bits (155), Expect(2) = 3e-27
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 535  QFVTGSPRLPLGGFAALNPKMTIVRKHCNNDVDMDFP 425
            QFVTG+PRLP GG A+LNPK+TIVRKHC+N VD D P
Sbjct: 1487 QFVTGAPRLPPGGLASLNPKLTIVRKHCSNRVDADLP 1523


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score = 81.6 bits (200), Expect(2) = 2e-26
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -3

Query: 365  DMDLPSVMTCANYVKLPAYSSKEHMKERLLYAITEGQGSFHLS 237
            D DLPSVMTCANY+KLP YSSKE MKE+LLYAITEGQGSFHLS
Sbjct: 1516 DTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS 1558



 Score = 62.8 bits (151), Expect(2) = 2e-26
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -1

Query: 535  QFVTGSPRLPLGGFAALNPKMTIVRKHCNNDVDMDFP 425
            QFVTG+PRLP GG A+LNPK+TIVRKHC+N  D D P
Sbjct: 1484 QFVTGAPRLPPGGLASLNPKLTIVRKHCSNRADTDLP 1520


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score = 81.6 bits (200), Expect(2) = 2e-26
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -3

Query: 365  DMDLPSVMTCANYVKLPAYSSKEHMKERLLYAITEGQGSFHLS 237
            D DLPSVMTCANY+KLP YSSKE MKE+LLYAITEGQGSFHLS
Sbjct: 1515 DTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS 1557



 Score = 62.8 bits (151), Expect(2) = 2e-26
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -1

Query: 535  QFVTGSPRLPLGGFAALNPKMTIVRKHCNNDVDMDFP 425
            QFVTG+PRLP GG A+LNPK+TIVRKHC+N  D D P
Sbjct: 1483 QFVTGAPRLPPGGLASLNPKLTIVRKHCSNRADTDLP 1519


>ref|XP_004137960.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL4-like
            [Cucumis sativus]
          Length = 1508

 Score = 82.0 bits (201), Expect(2) = 2e-26
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -3

Query: 368  VDMDLPSVMTCANYVKLPAYSSKEHMKERLLYAITEGQGSFHLS 237
            VD DLPSVMTCANY+KLP YSSKE MKE+LLYAITEGQGSFHLS
Sbjct: 1465 VDYDLPSVMTCANYLKLPPYSSKEIMKEKLLYAITEGQGSFHLS 1508



 Score = 62.4 bits (150), Expect(2) = 2e-26
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 535  QFVTGSPRLPLGGFAALNPKMTIVRKHCNNDVDMDFP 425
            QFVTG+PRLP GGFA+LNPK+TIVRKH +N VD D P
Sbjct: 1434 QFVTGAPRLPSGGFASLNPKLTIVRKHSSNLVDYDLP 1470


>gb|AFW82267.1| hypothetical protein ZEAMMB73_111992 [Zea mays]
          Length = 1210

 Score = 83.6 bits (205), Expect(2) = 2e-26
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -3

Query: 371  DVDMDLPSVMTCANYVKLPAYSSKEHMKERLLYAITEGQGSFHLS 237
            DVD DLPSVMTCANY+KLP YSSKE M+E+LLYAITEGQGSFHLS
Sbjct: 1166 DVDHDLPSVMTCANYLKLPPYSSKEKMREKLLYAITEGQGSFHLS 1210



 Score = 60.5 bits (145), Expect(2) = 2e-26
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -1

Query: 535  QFVTGSPRLPLGGFAALNPKMTIVRKHCNNDVDMDFP 425
            QF+TGSPRLP GG AALNPK T+VRK+ +NDVD D P
Sbjct: 1136 QFITGSPRLPPGGLAALNPKFTVVRKNNSNDVDHDLP 1172


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