BLASTX nr result

ID: Dioscorea21_contig00021743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021743
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC74993.1| hypothetical protein OsI_11050 [Oryza sativa Indi...    59   5e-07
ref|NP_001049749.1| Os03g0282900 [Oryza sativa Japonica Group] g...    59   5e-07
gb|ACN33548.1| unknown [Zea mays] gi|413956119|gb|AFW88768.1| hy...    57   1e-06
ref|NP_001144084.1| uncharacterized protein LOC100276917 [Zea ma...    57   1e-06

>gb|EEC74993.1| hypothetical protein OsI_11050 [Oryza sativa Indica Group]
          Length = 295

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -3

Query: 404 RPGIAQTARVAIAHFHSRIDAMNAYVTKNRSFCLNSPVTVRFLQ 273
           RPG+    RV +  F SR DA NA++TKNR FCLN+PV++R LQ
Sbjct: 252 RPGVPDPIRVVLVKFRSRTDAANAFITKNRGFCLNNPVSMRVLQ 295


>ref|NP_001049749.1| Os03g0282900 [Oryza sativa Japonica Group]
           gi|24796800|gb|AAN64476.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|108707530|gb|ABF95325.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548220|dbj|BAF11663.1| Os03g0282900 [Oryza sativa
           Japonica Group] gi|125585829|gb|EAZ26493.1| hypothetical
           protein OsJ_10385 [Oryza sativa Japonica Group]
           gi|215686508|dbj|BAG87769.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215717056|dbj|BAG95419.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737614|dbj|BAG96744.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 238

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = -3

Query: 404 RPGIAQTARVAIAHFHSRIDAMNAYVTKNRSFCLNSPVTVRFLQ 273
           RPG+    RV +  F SR DA NA++TKNR FCLN+PV++R LQ
Sbjct: 195 RPGVPDPIRVVLVKFRSRTDAANAFITKNRGFCLNNPVSMRVLQ 238


>gb|ACN33548.1| unknown [Zea mays] gi|413956119|gb|AFW88768.1| hypothetical protein
           ZEAMMB73_376296 [Zea mays]
          Length = 234

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = -3

Query: 404 RPGIAQTARVAIAHFHSRIDAMNAYVTKNRSFCLNSPVTVRFLQ 273
           R G+ +  R+ +  FH++ DAMNA++TKNRSFCLNS V++R LQ
Sbjct: 191 RAGVPEPIRMMLVKFHTKTDAMNAFITKNRSFCLNSQVSMRVLQ 234


>ref|NP_001144084.1| uncharacterized protein LOC100276917 [Zea mays]
           gi|195636666|gb|ACG37801.1| hypothetical protein [Zea
           mays]
          Length = 234

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = -3

Query: 404 RPGIAQTARVAIAHFHSRIDAMNAYVTKNRSFCLNSPVTVRFLQ 273
           R G+ +  R+ +  FH++ DAMNA++TKNRSFCLNS V++R LQ
Sbjct: 191 RAGVPEPIRMMLVKFHTKTDAMNAFITKNRSFCLNSQVSMRVLQ 234


Top