BLASTX nr result

ID: Dioscorea21_contig00021742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021742
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleop...   141   6e-32
ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleop...   141   6e-32
ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory pr...   138   5e-31
emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]   138   5e-31
ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleop...   135   6e-30

>ref|XP_004158841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
           sativus]
          Length = 256

 Score =  141 bits (356), Expect = 6e-32
 Identities = 72/95 (75%), Positives = 82/95 (86%)
 Frame = -1

Query: 555 QMDYTEVLKLRGLPYSVSKSEIVEFFGHEFCLNEESVHIVSRSDGKATGEAYVEFASVEM 376
           QM+YTE+LKLRGLP+SV+KS I+EFFG EF L E+ +HI SR DGKATGEAYVEFAS E 
Sbjct: 162 QMEYTEILKLRGLPFSVTKSNIIEFFG-EFDLAEDRIHIASRPDGKATGEAYVEFASAEE 220

Query: 375 AKKAMCKDKMTIGSRYVELFPSTHDEASRSHSRSR 271
           AK+AM KDKMTIGSRYVELFPST +EA R+ SRSR
Sbjct: 221 AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR 255


>ref|XP_004134826.1| PREDICTED: heterogeneous nuclear ribonucleoprotein F-like [Cucumis
           sativus]
          Length = 263

 Score =  141 bits (356), Expect = 6e-32
 Identities = 72/95 (75%), Positives = 82/95 (86%)
 Frame = -1

Query: 555 QMDYTEVLKLRGLPYSVSKSEIVEFFGHEFCLNEESVHIVSRSDGKATGEAYVEFASVEM 376
           QM+YTE+LKLRGLP+SV+KS I+EFFG EF L E+ +HI SR DGKATGEAYVEFAS E 
Sbjct: 169 QMEYTEILKLRGLPFSVTKSNIIEFFG-EFDLAEDRIHIASRPDGKATGEAYVEFASAEE 227

Query: 375 AKKAMCKDKMTIGSRYVELFPSTHDEASRSHSRSR 271
           AK+AM KDKMTIGSRYVELFPST +EA R+ SRSR
Sbjct: 228 AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR 262


>ref|XP_002280225.2| PREDICTED: epithelial splicing regulatory protein 2-like [Vitis
           vinifera]
          Length = 264

 Score =  138 bits (348), Expect = 5e-31
 Identities = 71/95 (74%), Positives = 81/95 (85%)
 Frame = -1

Query: 555 QMDYTEVLKLRGLPYSVSKSEIVEFFGHEFCLNEESVHIVSRSDGKATGEAYVEFASVEM 376
           QM++TE+LKLRGLP+SV KS+I+EFFG +F L ++ VHI  R DGKATGEAYVEFAS E 
Sbjct: 170 QMEHTEILKLRGLPFSVKKSQILEFFG-DFELGDDKVHIACRPDGKATGEAYVEFASAEE 228

Query: 375 AKKAMCKDKMTIGSRYVELFPSTHDEASRSHSRSR 271
           AKKAM KDKMTIGSRYVELFPST DEA R+ SRSR
Sbjct: 229 AKKAMGKDKMTIGSRYVELFPSTPDEARRAESRSR 263


>emb|CAN70556.1| hypothetical protein VITISV_016468 [Vitis vinifera]
          Length = 257

 Score =  138 bits (348), Expect = 5e-31
 Identities = 71/95 (74%), Positives = 81/95 (85%)
 Frame = -1

Query: 555 QMDYTEVLKLRGLPYSVSKSEIVEFFGHEFCLNEESVHIVSRSDGKATGEAYVEFASVEM 376
           QM++TE+LKLRGLP+SV KS+I+EFFG +F L ++ VHI  R DGKATGEAYVEFAS E 
Sbjct: 163 QMEHTEILKLRGLPFSVKKSQILEFFG-DFELGDDKVHIACRPDGKATGEAYVEFASAEE 221

Query: 375 AKKAMCKDKMTIGSRYVELFPSTHDEASRSHSRSR 271
           AKKAM KDKMTIGSRYVELFPST DEA R+ SRSR
Sbjct: 222 AKKAMGKDKMTIGSRYVELFPSTPDEARRAESRSR 256


>ref|XP_003534237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein H3-like isoform
           2 [Glycine max]
          Length = 257

 Score =  135 bits (339), Expect = 6e-30
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = -1

Query: 555 QMDYTEVLKLRGLPYSVSKSEIVEFFGHEFCLNEESVHIVSRSDGKATGEAYVEFASVEM 376
           QM+YTE+LK+RGLP+ V+KS+IVEFF  +F L E+ VHI  R DGKATGEAYVEF S E 
Sbjct: 163 QMEYTEILKMRGLPFQVTKSQIVEFF-KDFKLIEDRVHIACRPDGKATGEAYVEFVSAEE 221

Query: 375 AKKAMCKDKMTIGSRYVELFPSTHDEASRSHSRSR 271
           AK+AM KDKMTIGSRYVELFPST DEA R+ SRSR
Sbjct: 222 AKRAMSKDKMTIGSRYVELFPSTPDEARRAESRSR 256


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