BLASTX nr result

ID: Dioscorea21_contig00021737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021737
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001052511.1| Os04g0346000 [Oryza sativa Japonica Group] g...    93   5e-25
ref|NP_181836.1| P4H isoform 1 [Arabidopsis thaliana] gi|3763917...    89   6e-25
ref|XP_002302889.1| predicted protein [Populus trichocarpa] gi|2...    94   8e-25
emb|CAH66506.1| OSIGBa0111I14.1 [Oryza sativa Indica Group]            93   8e-25
gb|ACU19258.1| unknown [Glycine max]                                   90   2e-24

>ref|NP_001052511.1| Os04g0346000 [Oryza sativa Japonica Group]
           gi|38346023|emb|CAE03962.2| OSJNBb0085H11.11 [Oryza
           sativa Japonica Group] gi|113564082|dbj|BAF14425.1|
           Os04g0346000 [Oryza sativa Japonica Group]
           gi|125547818|gb|EAY93640.1| hypothetical protein
           OsI_15426 [Oryza sativa Indica Group]
           gi|125589953|gb|EAZ30303.1| hypothetical protein
           OsJ_14349 [Oryza sativa Japonica Group]
           gi|215693934|dbj|BAG89133.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 267

 Score = 92.8 bits (229), Expect(2) = 5e-25
 Identities = 42/55 (76%), Positives = 50/55 (90%)
 Frame = +3

Query: 210 HWENDKEAAALRIKFVKPEVVSWSPRIVVFHNFLSMEECEYLQAIAKPRLQISTV 374
           H END+EAA LR+  VKPEV+SWSPRI+VFHNFLS EEC+YL++IA+PRLQISTV
Sbjct: 44  HLENDQEAAFLRLGLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTV 98



 Score = 46.6 bits (109), Expect(2) = 5e-25
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +2

Query: 32  ARIRFVLGLLTFVTIGMIIGSLFQLAFIHHLEESSGNPHWE 154
           AR R +L LLTFVT+GMI+GSL QLAF   +++ S   H E
Sbjct: 6   ARARRLLPLLTFVTLGMILGSLLQLAFFRRIDDHSNVTHLE 46


>ref|NP_181836.1| P4H isoform 1 [Arabidopsis thaliana] gi|3763917|gb|AAC64297.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|20197628|gb|AAM15158.1| hypothetical protein
           [Arabidopsis thaliana] gi|26450452|dbj|BAC42340.1|
           unknown protein [Arabidopsis thaliana]
           gi|29824245|gb|AAP04083.1| unknown protein [Arabidopsis
           thaliana] gi|330255112|gb|AEC10206.1| P4H isoform 1
           [Arabidopsis thaliana]
          Length = 283

 Score = 88.6 bits (218), Expect(2) = 6e-25
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +3

Query: 213 WENDKEAAALRIKFVKPEVVSWSPRIVVFHNFLSMEECEYLQAIAKPRLQISTV 374
           W NDK+A  LRI  VKPEVVSWSPRI+V H+FLS EECEYL+AIA+PRLQ+STV
Sbjct: 61  WANDKDAELLRIGNVKPEVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTV 114



 Score = 50.4 bits (119), Expect(2) = 6e-25
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = +2

Query: 38  IRFVLGLLTFVTIGMIIGSLFQLAFIHHLEESSG 139
           ++ V GLLTFVT+GM+IGSL QLAFI+ LE+S G
Sbjct: 5   MKIVFGLLTFVTVGMVIGSLLQLAFINRLEDSYG 38


>ref|XP_002302889.1| predicted protein [Populus trichocarpa] gi|222844615|gb|EEE82162.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 94.0 bits (232), Expect(2) = 8e-25
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = +3

Query: 210 HWENDKEAAALRIKFVKPEVVSWSPRIVVFHNFLSMEECEYLQAIAKPRLQISTV 374
           HW+ND EAA LRI +VKPE++SWSPRI+V H+FLS EEC+YL+A+AKPRL+ISTV
Sbjct: 64  HWDNDTEAAVLRIGYVKPEIISWSPRIIVLHDFLSSEECDYLRALAKPRLRISTV 118



 Score = 44.7 bits (104), Expect(2) = 8e-25
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = +2

Query: 38  IRFVLGLLTFVTIGMIIGSLFQLAFIHHLEESSG 139
           ++ V GLL FVT GMI+G+ FQLAFI  LE+S G
Sbjct: 5   MKIVFGLLAFVTAGMIVGAFFQLAFILKLEDSYG 38


>emb|CAH66506.1| OSIGBa0111I14.1 [Oryza sativa Indica Group]
          Length = 267

 Score = 92.8 bits (229), Expect(2) = 8e-25
 Identities = 42/55 (76%), Positives = 50/55 (90%)
 Frame = +3

Query: 210 HWENDKEAAALRIKFVKPEVVSWSPRIVVFHNFLSMEECEYLQAIAKPRLQISTV 374
           H END+EAA LR+  VKPEV+SWSPRI+VFHNFLS EEC+YL++IA+PRLQISTV
Sbjct: 44  HLENDQEAAFLRLGLVKPEVISWSPRIIVFHNFLSSEECDYLRSIARPRLQISTV 98



 Score = 45.8 bits (107), Expect(2) = 8e-25
 Identities = 23/41 (56%), Positives = 28/41 (68%)
 Frame = +2

Query: 32  ARIRFVLGLLTFVTIGMIIGSLFQLAFIHHLEESSGNPHWE 154
           AR R +L LLTFVT+GMI+GSL QLAF   ++  S   H E
Sbjct: 6   ARARRLLPLLTFVTLGMILGSLLQLAFFRRIDHHSNVTHLE 46


>gb|ACU19258.1| unknown [Glycine max]
          Length = 287

 Score = 90.1 bits (222), Expect(2) = 2e-24
 Identities = 39/56 (69%), Positives = 48/56 (85%)
 Frame = +3

Query: 207 PHWENDKEAAALRIKFVKPEVVSWSPRIVVFHNFLSMEECEYLQAIAKPRLQISTV 374
           P W NDKEA  LR+ +VKPEV++WSPRI++ HNFLSMEEC+YL+A+A PRL ISTV
Sbjct: 63  PFWNNDKEAEILRLGYVKPEVLNWSPRIILLHNFLSMEECDYLRALALPRLHISTV 118



 Score = 47.4 bits (111), Expect(2) = 2e-24
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = +2

Query: 38  IRFVLGLLTFVTIGMIIGSLFQLAFIHHLEESSG 139
           +R V GLLTFVT+GMIIG+L QLA I  LE+S G
Sbjct: 5   MRIVFGLLTFVTVGMIIGALSQLAIIRRLEDSYG 38


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