BLASTX nr result

ID: Dioscorea21_contig00021728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021728
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334343.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002512599.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_003626116.1| hypothetical protein MTR_7g111200 [Medicago ...    72   4e-11
ref|XP_002460101.1| hypothetical protein SORBIDRAFT_02g022780 [S...    67   2e-09
ref|XP_002318911.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|XP_002334343.1| predicted protein [Populus trichocarpa]
           gi|224124272|ref|XP_002329982.1| predicted protein
           [Populus trichocarpa] gi|118481367|gb|ABK92626.1|
           unknown [Populus trichocarpa]
           gi|222871401|gb|EEF08532.1| predicted protein [Populus
           trichocarpa] gi|222871407|gb|EEF08538.1| predicted
           protein [Populus trichocarpa]
          Length = 130

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
 Frame = +3

Query: 42  GGQYH-KLTSEDKSPRPGIRWLRNVNGKVFGLRLSSSKRLKWKQFSVIMLPR---RIFEL 209
           G QYH KL +    PR    W++ +NG V GLRLS S++L +K  SVI++P    RI ++
Sbjct: 22  GDQYHEKLMAR---PRRWRFWVKKMNGGVKGLRLSRSRKLTFKALSVILMPSPNSRIAKV 78

Query: 210 YEEISSAMK--PDGVVYPTISFSSHWGLPVISHPSIVCRKKLVYLN 341
           Y  +   +K   D  +YP I FS+HWGLPV+SHPS+    +L  L+
Sbjct: 79  YAHVIDRIKMMDDLTLYPNIIFSTHWGLPVLSHPSVKTTTRLSSLH 124


>ref|XP_002512599.1| conserved hypothetical protein [Ricinus communis]
           gi|223548560|gb|EEF50051.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 82

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/80 (42%), Positives = 54/80 (67%)
 Frame = +3

Query: 111 VNGKVFGLRLSSSKRLKWKQFSVIMLPRRIFELYEEISSAMKPDGVVYPTISFSSHWGLP 290
           +NG++ G+RL  S++  +K  SV++LP RI  +Y +  S +K    +YP I FS+  GLP
Sbjct: 1   MNGRLKGIRLPRSRKFTFKALSVMVLPSRIARVYADTISRIKMMDDLYPNIIFSTQLGLP 60

Query: 291 VISHPSIVCRKKLVYLNRKF 350
           V+SHPSI C+++ + L+R F
Sbjct: 61  VLSHPSIKCKRRAISLHRNF 80


>ref|XP_003626116.1| hypothetical protein MTR_7g111200 [Medicago truncatula]
           gi|87241000|gb|ABD32858.1| hypothetical protein
           MtrDRAFT_AC149038g21v2 [Medicago truncatula]
           gi|355501131|gb|AES82334.1| hypothetical protein
           MTR_7g111200 [Medicago truncatula]
          Length = 118

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
 Frame = +3

Query: 51  YHKLTSEDKSPRPGIR--WLRNVNGKVFGLRLSSSKRLKWKQFSVIMLPRRIFELYEEIS 224
           Y KLTS+ +  R G R  W++++NGK+ GLRLS S++     FS ++   RI  +Y +I 
Sbjct: 18  YEKLTSK-RMMRVGKRCIWVKSLNGKLRGLRLSRSRKF----FSTMLYSTRIVRIYNDIV 72

Query: 225 SAMKPDGVVYPTISFSSHWGLPVISHPSIVCRKK-LVYLNRK 347
           + +      YP I   + WGLPV+SHPS+VCR+  +V  NRK
Sbjct: 73  NKIMNMENSYPVIVLPTQWGLPVLSHPSVVCRRSVMVPPNRK 114


>ref|XP_002460101.1| hypothetical protein SORBIDRAFT_02g022780 [Sorghum bicolor]
           gi|241923478|gb|EER96622.1| hypothetical protein
           SORBIDRAFT_02g022780 [Sorghum bicolor]
          Length = 440

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
 Frame = +3

Query: 48  QYHKLTSEDK-----SPRPGIRWLRNVNGKVFGLRLSSSKRLKWKQFSVIMLPRRIFELY 212
           QY +L   D      SPR   RWL  +NGK     L S KRLKW + + +++PR++ E  
Sbjct: 333 QYQRLECWDDGAAAPSPRSRWRWLPALNGKTASPCLFSVKRLKWSKITSVLIPRKVAEFS 392

Query: 213 EEISSAMKPDGV-VYPTISFSSHWGLPVISHPSIVCRK 323
            +I  A     V V PT+ F S WGLPV+S P +V  K
Sbjct: 393 AKIRHASARTEVDVCPTVVFMSPWGLPVLSRPLLVGHK 430


>ref|XP_002318911.1| predicted protein [Populus trichocarpa] gi|222857287|gb|EEE94834.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 13/112 (11%)
 Frame = +3

Query: 9   MGLRDVIRGCSGGQYHKLTS-EDKS-------PRPGIRWLRNVNGKVFGLRLSSSKRLKW 164
           +G   V+   S  +Y KL++ ED++       PR    W++ +NG+V GLRLS S++L +
Sbjct: 4   VGFEAVVGMHSRFRYEKLSNGEDQNHEKLMARPRRRHCWVKKMNGRVKGLRLSRSRKLTF 63

Query: 165 KQFSVIMLP---RRIFELYEEISSAMK--PDGVVYPTISFSSHWGLPVISHP 305
           K  SVI++P    RI ++Y  I   +K   D  +YP I  S+ WGLP +SHP
Sbjct: 64  KALSVILMPSPSSRIAKVYAHIIDRIKIMDDLNLYPNIILSTRWGLPGLSHP 115


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