BLASTX nr result

ID: Dioscorea21_contig00021727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021727
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT85295.1| FYVE zinc finger containing protein [Oryza sativa...    99   4e-19
gb|AAP44653.1| unknown protein [Oryza sativa Japonica Group]           99   4e-19
ref|XP_002456991.1| hypothetical protein SORBIDRAFT_03g046860 [S...    94   1e-17
ref|XP_002305636.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002452359.1| hypothetical protein SORBIDRAFT_04g024360 [S...    89   3e-16

>gb|AAT85295.1| FYVE zinc finger containing protein [Oryza sativa Japonica Group]
            gi|108710311|gb|ABF98106.1| FYVE zinc finger family
            protein, expressed [Oryza sativa Japonica Group]
          Length = 1094

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 62/135 (45%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
 Frame = -1

Query: 451  QVDSKTTPTQSFDDAPVVQEIKPKQAKKPLSGRERLKLQQESLAHKRNALKLRREGKIXX 272
            Q  S  + T     AP  QEIKP Q  K LS R+RLK+Q+ESLAHKRNALKLRREGK   
Sbjct: 905  QSASAKSCTDDISSAPPAQEIKPVQPPKALSSRDRLKIQRESLAHKRNALKLRREGK--- 961

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDDAVVEDLLDPQLMSVLKSIGWNDSD 92
                                              +DA VEDLLDPQ+MS LKSIGW+D+D
Sbjct: 962  -TAEADAEFELAKSLESQLEESESQVSGGKSSDANDAAVEDLLDPQIMSALKSIGWSDAD 1020

Query: 91   MF-----SQPSKKPE 62
            +      +QPSKK E
Sbjct: 1021 LSAQSSNAQPSKKAE 1035


>gb|AAP44653.1| unknown protein [Oryza sativa Japonica Group]
          Length = 1142

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 62/135 (45%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
 Frame = -1

Query: 451  QVDSKTTPTQSFDDAPVVQEIKPKQAKKPLSGRERLKLQQESLAHKRNALKLRREGKIXX 272
            Q  S  + T     AP  QEIKP Q  K LS R+RLK+Q+ESLAHKRNALKLRREGK   
Sbjct: 953  QSASAKSCTDDISSAPPAQEIKPVQPPKALSSRDRLKIQRESLAHKRNALKLRREGK--- 1009

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDDAVVEDLLDPQLMSVLKSIGWNDSD 92
                                              +DA VEDLLDPQ+MS LKSIGW+D+D
Sbjct: 1010 -TAEADAEFELAKSLESQLEESESQVSGGKSSDANDAAVEDLLDPQIMSALKSIGWSDAD 1068

Query: 91   MF-----SQPSKKPE 62
            +      +QPSKK E
Sbjct: 1069 LSAQSSNAQPSKKAE 1083


>ref|XP_002456991.1| hypothetical protein SORBIDRAFT_03g046860 [Sorghum bicolor]
            gi|241928966|gb|EES02111.1| hypothetical protein
            SORBIDRAFT_03g046860 [Sorghum bicolor]
          Length = 955

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 56/128 (43%), Positives = 67/128 (52%)
 Frame = -1

Query: 442  SKTTPTQSFDDAPVVQEIKPKQAKKPLSGRERLKLQQESLAHKRNALKLRREGKIXXXXX 263
            S +  T     AP  Q  K  Q +K +S R+RLK+Q+ESLAHKRNALKLRREGKI     
Sbjct: 756  SSSIQTDGVASAPPAQASKSTQPQKVMSSRDRLKIQRESLAHKRNALKLRREGKI--AEA 813

Query: 262  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDDAVVEDLLDPQLMSVLKSIGWNDSDMFS 83
                                          P+DA+VEDLLDPQ+MS LKSIGW+D D+  
Sbjct: 814  DAAFELAKALESQLEESDNQGSSSGVKSGEPNDAMVEDLLDPQIMSALKSIGWSDMDLSM 873

Query: 82   QPSKKPEP 59
            Q S    P
Sbjct: 874  QSSSTQPP 881


>ref|XP_002305636.1| predicted protein [Populus trichocarpa] gi|222848600|gb|EEE86147.1|
            predicted protein [Populus trichocarpa]
          Length = 1213

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/124 (43%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
 Frame = -1

Query: 421  SFDDAPVVQEIKPKQAK---KPLSGRERLKLQQESLAHKRNALKLRREGKIXXXXXXXXX 251
            S  +AP  Q+  P   K   KPLSGR+R KLQQESL+HKR ALKLRREG++         
Sbjct: 1031 SVSNAPPFQQKDPSAPKFSPKPLSGRDRFKLQQESLSHKRQALKLRREGQVEEAEAEFEL 1090

Query: 250  XXXXXXXXXXXXXXXXXXXXXXXXXAPDDAVVEDLLDPQLMSVLKSIGWNDSDMFSQPSK 71
                                       DD VVED LDPQL+S LK+IG  DS + SQ S+
Sbjct: 1091 AKALEAQLDEMSSNDSGKSSVNIAEPVDDVVVEDFLDPQLLSALKAIGIEDSSIISQSSE 1150

Query: 70   KPEP 59
            +P P
Sbjct: 1151 RPGP 1154


>ref|XP_002452359.1| hypothetical protein SORBIDRAFT_04g024360 [Sorghum bicolor]
            gi|241932190|gb|EES05335.1| hypothetical protein
            SORBIDRAFT_04g024360 [Sorghum bicolor]
          Length = 1103

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 55/136 (40%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
 Frame = -1

Query: 451  QVDSKTTPTQSFDDAPVVQEIKPKQAKKPLSGRERLKLQQESLAHKRNALKLRREGKIXX 272
            Q  S +  T     AP  Q  K  Q +K +S R+RLK+Q+ESLAHKRNALKLRREGK   
Sbjct: 902  QPASSSNHTDDVTSAPPAQVSKSTQPQKAMSSRDRLKIQRESLAHKRNALKLRREGK--T 959

Query: 271  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPDDAVVEDLLDPQLMSVLKSIGWNDSD 92
                                             P+DA+VE+LLDPQ+MS L+SIGW+D D
Sbjct: 960  AEADAEFELAKELESQLEEPDNQSSSSGGKSSEPNDAIVENLLDPQIMSALRSIGWSDMD 1019

Query: 91   M-----FSQPSKKPEP 59
            +      +QP K  +P
Sbjct: 1020 LSMQSSSAQPQKPMQP 1035


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