BLASTX nr result

ID: Dioscorea21_contig00021719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021719
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   228   3e-58
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   226   1e-57
ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide defo...   226   1e-57
ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solan...   225   3e-57
ref|XP_003569198.1| PREDICTED: peptide deformylase 1A, chloropla...   224   6e-57

>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  228 bits (582), Expect = 3e-58
 Identities = 109/132 (82%), Positives = 120/132 (90%)
 Frame = +1

Query: 1   IIVLEDTKQYISYAPRKEIEMQDRRSFDLLVILNPKLKKKGTKTALFFEGCLSVDGFRAV 180
           IIVLEDT +YI YAP++E + QDRR FDLLVILNPKLKKKG +TALFFEGCLSVDGFRAV
Sbjct: 135 IIVLEDTTEYIGYAPKEETKAQDRRPFDLLVILNPKLKKKGNRTALFFEGCLSVDGFRAV 194

Query: 181 VERHLEVEVTGLDRSGCPIKIDAAGWQARILQHECDHLDGTIFVDKMVPRTFRTVENLDL 360
           VER LEVEV+GLDRSG PIK+DA+GWQARILQHECDHLDGT++VDKMVPRTFRTV+NLDL
Sbjct: 195 VERSLEVEVSGLDRSGQPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTVDNLDL 254

Query: 361 PLPMGCPKLGVQ 396
           PL  GCP LG Q
Sbjct: 255 PLAEGCPNLGAQ 266


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/132 (81%), Positives = 119/132 (90%)
 Frame = +1

Query: 1   IIVLEDTKQYISYAPRKEIEMQDRRSFDLLVILNPKLKKKGTKTALFFEGCLSVDGFRAV 180
           IIVLEDTK+YISYAP++EI+ QDRRSFDLLVI+NPKLK K  KTALFFEGCLSVDGFRAV
Sbjct: 136 IIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAV 195

Query: 181 VERHLEVEVTGLDRSGCPIKIDAAGWQARILQHECDHLDGTIFVDKMVPRTFRTVENLDL 360
           VER+L+VEV G DR G PIK+DA+GWQARILQHECDHLDGT++VDKMVPRTFRT ENL L
Sbjct: 196 VERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTL 255

Query: 361 PLPMGCPKLGVQ 396
           PL  GCPKLG +
Sbjct: 256 PLAEGCPKLGAR 267


>ref|XP_004152208.1| PREDICTED: LOW QUALITY PROTEIN: peptide deformylase 1A,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/132 (81%), Positives = 119/132 (90%)
 Frame = +1

Query: 1   IIVLEDTKQYISYAPRKEIEMQDRRSFDLLVILNPKLKKKGTKTALFFEGCLSVDGFRAV 180
           IIVLEDTK+YISYAP++EI+ QDRRSFDLLVI+NPKLK K  KTALFFEGCLSVDGFRAV
Sbjct: 136 IIVLEDTKEYISYAPKEEIKAQDRRSFDLLVIINPKLKSKSNKTALFFEGCLSVDGFRAV 195

Query: 181 VERHLEVEVTGLDRSGCPIKIDAAGWQARILQHECDHLDGTIFVDKMVPRTFRTVENLDL 360
           VER+L+VEV G DR G PIK+DA+GWQARILQHECDHLDGT++VDKMVPRTFRT ENL L
Sbjct: 196 VERYLDVEVAGFDRDGNPIKVDASGWQARILQHECDHLDGTLYVDKMVPRTFRTTENLTL 255

Query: 361 PLPMGCPKLGVQ 396
           PL  GCPKLG +
Sbjct: 256 PLAEGCPKLGAR 267


>ref|NP_001234703.1| peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
           gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName:
           Full=Peptide deformylase 1A, chloroplastic; Short=PDF
           1A; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320968|gb|AAG33981.1|AF271258_1 peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 277

 Score =  225 bits (574), Expect = 3e-57
 Identities = 109/131 (83%), Positives = 118/131 (90%)
 Frame = +1

Query: 1   IIVLEDTKQYISYAPRKEIEMQDRRSFDLLVILNPKLKKKGTKTALFFEGCLSVDGFRAV 180
           IIVLEDT +YISYAP+ E + QDRR F LLVI+NPKLKKKG KTALFFEGCLSVDGFRAV
Sbjct: 146 IIVLEDTNEYISYAPKDETKAQDRRPFGLLVIINPKLKKKGNKTALFFEGCLSVDGFRAV 205

Query: 181 VERHLEVEVTGLDRSGCPIKIDAAGWQARILQHECDHLDGTIFVDKMVPRTFRTVENLDL 360
           VERHLEVEVTGLDR+G  IK+DA+GWQARILQHE DHLDGT++VDKM PRTFRTVENLDL
Sbjct: 206 VERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHLDGTLYVDKMAPRTFRTVENLDL 265

Query: 361 PLPMGCPKLGV 393
           PL  GCPKLGV
Sbjct: 266 PLAAGCPKLGV 276


>ref|XP_003569198.1| PREDICTED: peptide deformylase 1A, chloroplastic-like [Brachypodium
           distachyon]
          Length = 258

 Score =  224 bits (571), Expect = 6e-57
 Identities = 101/132 (76%), Positives = 122/132 (92%)
 Frame = +1

Query: 1   IIVLEDTKQYISYAPRKEIEMQDRRSFDLLVILNPKLKKKGTKTALFFEGCLSVDGFRAV 180
           IIVLEDT++YISYAP+K+I+ QDRR FDLLVI+NPKLKK   +TALF+EGCLSVDG+RAV
Sbjct: 127 IIVLEDTQEYISYAPKKDIDAQDRRPFDLLVIINPKLKKTSKRTALFYEGCLSVDGYRAV 186

Query: 181 VERHLEVEVTGLDRSGCPIKIDAAGWQARILQHECDHLDGTIFVDKMVPRTFRTVENLDL 360
           VERHL+VEV+GLDR+GCP+K++A+GWQARILQHECDHL+GT++VDKMVPRTFR V+NLDL
Sbjct: 187 VERHLDVEVSGLDRNGCPVKVEASGWQARILQHECDHLEGTLYVDKMVPRTFRVVDNLDL 246

Query: 361 PLPMGCPKLGVQ 396
           PL  GCP LG +
Sbjct: 247 PLATGCPPLGAR 258


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