BLASTX nr result
ID: Dioscorea21_contig00021675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00021675
(950 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like... 186 7e-45
emb|CBI25868.3| unnamed protein product [Vitis vinifera] 186 7e-45
ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [S... 181 2e-43
dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare] 175 2e-41
ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like... 172 8e-41
>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
Length = 964
Score = 186 bits (472), Expect = 7e-45
Identities = 111/222 (50%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Frame = +2
Query: 290 KKRVYHVLRADGSKISMNSKSAAXXXXXXXXXXXXXXXXXASCSDGGKGHINSGVMLEEV 469
KKRVYH +R+DG K+ +KS D N GV+LEEV
Sbjct: 326 KKRVYHFVRSDGGKLGGQNKSVTNKKRKLNNNKNEAN------GDSVLVGTNGGVVLEEV 379
Query: 470 LEEAPKWKVXXXXXXXXXXXXXKVALSREDELGAEDTGEDTGIVMVACKDERSCLQLEAC 649
LEE+PKWKV + A SRED AE +D+GIV+VACKDERSC+QLE
Sbjct: 380 LEESPKWKVLREVLKEIEEEREQQASSREDA-SAEGDEDDSGIVLVACKDERSCMQLEDF 438
Query: 650 ITKGPHQVMREEWGKYLLGKAELHGLQKRSKKKNQEPKGFGILNGEVANGPYENTDPSSI 829
I P +VMREEW KYLL K EL GLQ R K K +EPKGFGILNGEV + +NT+P+SI
Sbjct: 439 IKSDPQKVMREEWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSI 498
Query: 830 SKLENDALLAAASEISHLASEEISVGDGSDP---CATRGRSR 946
SKLE+DAL+AAAS IS LA ++ +V D S P RG+ R
Sbjct: 499 SKLEHDALMAAASVIS-LAKKDTAVSDNSQPHIGSGGRGKGR 539
Score = 84.7 bits (208), Expect = 3e-14
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 TVENGLFKSFDEIVRQQLDPIWHTLGKKTKQLVNDLKTLRKL 126
TVENGLFKSFDEIVR+QLDPIWHTLGKKTKQLV+DLKTLRKL
Sbjct: 242 TVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKL 283
>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
Length = 1195
Score = 186 bits (472), Expect = 7e-45
Identities = 111/222 (50%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Frame = +2
Query: 290 KKRVYHVLRADGSKISMNSKSAAXXXXXXXXXXXXXXXXXASCSDGGKGHINSGVMLEEV 469
KKRVYH +R+DG K+ +KS D N GV+LEEV
Sbjct: 560 KKRVYHFVRSDGGKLGGQNKSVTNKKRKLNNNKNEAN------GDSVLVGTNGGVVLEEV 613
Query: 470 LEEAPKWKVXXXXXXXXXXXXXKVALSREDELGAEDTGEDTGIVMVACKDERSCLQLEAC 649
LEE+PKWKV + A SRED AE +D+GIV+VACKDERSC+QLE
Sbjct: 614 LEESPKWKVLREVLKEIEEEREQQASSREDA-SAEGDEDDSGIVLVACKDERSCMQLEDF 672
Query: 650 ITKGPHQVMREEWGKYLLGKAELHGLQKRSKKKNQEPKGFGILNGEVANGPYENTDPSSI 829
I P +VMREEW KYLL K EL GLQ R K K +EPKGFGILNGEV + +NT+P+SI
Sbjct: 673 IKSDPQKVMREEWEKYLLSKVELQGLQTRKKNKAKEPKGFGILNGEVPSTSGQNTEPTSI 732
Query: 830 SKLENDALLAAASEISHLASEEISVGDGSDP---CATRGRSR 946
SKLE+DAL+AAAS IS LA ++ +V D S P RG+ R
Sbjct: 733 SKLEHDALMAAASVIS-LAKKDTAVSDNSQPHIGSGGRGKGR 773
Score = 84.7 bits (208), Expect = 3e-14
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +1
Query: 1 TVENGLFKSFDEIVRQQLDPIWHTLGKKTKQLVNDLKTLRKL 126
TVENGLFKSFDEIVR+QLDPIWHTLGKKTKQLV+DLKTLRKL
Sbjct: 476 TVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKL 517
>ref|XP_002466046.1| hypothetical protein SORBIDRAFT_01g050650 [Sorghum bicolor]
gi|241919900|gb|EER93044.1| hypothetical protein
SORBIDRAFT_01g050650 [Sorghum bicolor]
Length = 1032
Score = 181 bits (460), Expect = 2e-43
Identities = 100/226 (44%), Positives = 136/226 (60%), Gaps = 7/226 (3%)
Frame = +2
Query: 290 KKRVYHVLRADGSKISMNSKSAAXXXXXXXXXXXXXXXXXASCSDGGKGHINS------- 448
K+RVY +R DG+K+SM++K + D G N+
Sbjct: 366 KRRVYQAVRTDGAKVSMDNKGTPTKKRKVAHNTTKKGKETEN-EDSTVGRDNTQKVNTDV 424
Query: 449 GVMLEEVLEEAPKWKVXXXXXXXXXXXXXKVALSREDELGAEDTGEDTGIVMVACKDERS 628
G++LEEVLEEAPKWKV K S + ED ++ GIV+V CKDER+
Sbjct: 425 GIVLEEVLEEAPKWKVLWELLQEIAEEQMK---SDAGNVHDEDKSDEHGIVLVTCKDERT 481
Query: 629 CLQLEACITKGPHQVMREEWGKYLLGKAELHGLQKRSKKKNQEPKGFGILNGEVANGPYE 808
CLQL+ CI KGP QVMREEW KYL+GKAELHGL K++K+K+++PKG G+L+GEV G E
Sbjct: 482 CLQLQECILKGPCQVMREEWEKYLIGKAELHGLNKKNKRKSEQPKGVGVLDGEVQMGSSE 541
Query: 809 NTDPSSISKLENDALLAAASEISHLASEEISVGDGSDPCATRGRSR 946
+ P SISKLE +AL AAA E+ ++++E G + C+T+G +R
Sbjct: 542 SVGPVSISKLETNALFAAACELRNISNEADVNGGSNSSCSTKGLAR 587
Score = 79.0 bits (193), Expect = 2e-12
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +1
Query: 1 TVENGLFKSFDEIVRQQLDPIWHTLGKKTKQLVNDLKTLRKL 126
TV+ GLFKSFDEIVR+QLDPIWHTLGKKTKQLV DL+TLRKL
Sbjct: 282 TVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKL 323
>dbj|BAJ99112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 998
Score = 175 bits (443), Expect = 2e-41
Identities = 101/225 (44%), Positives = 130/225 (57%), Gaps = 9/225 (4%)
Frame = +2
Query: 290 KKRVYHVLRADGSKISM-----NSKSAAXXXXXXXXXXXXXXXXXASCSDGGKGHINSGV 454
K+RVY V+R DG+++S+ K ++ D K + +
Sbjct: 340 KRRVYQVVRPDGTRVSIAKGTPTKKRKVTPSRSKKGKETENEDSASNKDDAQKVNAEASF 399
Query: 455 MLEEVLEEAPKWKVXXXXXXXXXXXXXKVALSREDELGAEDTGEDTGIVMVACKDERSCL 634
+LEEVLEEAPKWKV K D + ED + GIV+VACKDERSCL
Sbjct: 400 LLEEVLEEAPKWKVLRELLQEIAEEQRK-----GDAVVHEDENNECGIVLVACKDERSCL 454
Query: 635 QLEACITKGPHQVMREEWGKYLLGKAELHGLQKRSKKKNQEPKGFGILNGEVANGPYENT 814
QL+ CI + PHQVMREEW KYLLGKAEL GL K+ KK++Q+PKGFG+L+G+ G EN
Sbjct: 455 QLQECILRSPHQVMREEWEKYLLGKAELFGLHKKKKKRSQQPKGFGVLDGQFPTGSNENE 514
Query: 815 D----PSSISKLENDALLAAASEISHLASEEISVGDGSDPCATRG 937
+ P SISKLE +ALLAAAS IS+L E + D C+ +G
Sbjct: 515 NENAGPVSISKLETNALLAAASGISNLTKEADAKEDPVPSCSKKG 559
Score = 78.6 bits (192), Expect = 2e-12
Identities = 36/42 (85%), Positives = 40/42 (95%)
Frame = +1
Query: 1 TVENGLFKSFDEIVRQQLDPIWHTLGKKTKQLVNDLKTLRKL 126
T++ GLFKSFDEIVR+QLDPIWHTLGKKTKQLV DL+TLRKL
Sbjct: 256 TIDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKL 297
>ref|XP_003559048.1| PREDICTED: DNA repair endonuclease UVH1-like [Brachypodium
distachyon]
Length = 991
Score = 172 bits (437), Expect = 8e-41
Identities = 98/222 (44%), Positives = 126/222 (56%), Gaps = 6/222 (2%)
Frame = +2
Query: 290 KKRVYHVLRADGSKISMNSKSA------AXXXXXXXXXXXXXXXXXASCSDGGKGHINSG 451
K+RVY V+R DG+K+S ++K A + D +
Sbjct: 336 KRRVYQVVRPDGTKVSTSNKGTPTKKRKATHSSSKKGKETENEDSAPNKDDAQNVNAEVS 395
Query: 452 VMLEEVLEEAPKWKVXXXXXXXXXXXXXKVALSREDELGAEDTGEDTGIVMVACKDERSC 631
++LEEVLEEAPKWKV K D E ++GIV++ACKDERSC
Sbjct: 396 ILLEEVLEEAPKWKVLRALLQEIAEEQRK-----GDGAVPEVESNESGIVLLACKDERSC 450
Query: 632 LQLEACITKGPHQVMREEWGKYLLGKAELHGLQKRSKKKNQEPKGFGILNGEVANGPYEN 811
LQL+ CI+K PH+VMREEW KYLLGKAELHGL K+ K+++Q+PKGFG+L+GE G E+
Sbjct: 451 LQLQDCISKSPHKVMREEWEKYLLGKAELHGLHKKRKRQSQQPKGFGVLDGEFPIGSSES 510
Query: 812 TDPSSISKLENDALLAAASEISHLASEEISVGDGSDPCATRG 937
P SI LE +ALLAAAS I L E + D C+ RG
Sbjct: 511 AGPVSIGNLETNALLAAASGIKKLTKEADTKDDSIPSCSKRG 552
Score = 79.0 bits (193), Expect = 2e-12
Identities = 37/42 (88%), Positives = 40/42 (95%)
Frame = +1
Query: 1 TVENGLFKSFDEIVRQQLDPIWHTLGKKTKQLVNDLKTLRKL 126
TV+ GLFKSFDEIVR+QLDPIWHTLGKKTKQLV DL+TLRKL
Sbjct: 252 TVDKGLFKSFDEIVRRQLDPIWHTLGKKTKQLVADLRTLRKL 293