BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021668
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   432   e-119
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   423   e-116
ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methy...   407   e-111
ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferas...   405   e-111
ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methy...   404   e-110

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
            vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
            product [Vitis vinifera]
          Length = 335

 Score =  432 bits (1111), Expect = e-119
 Identities = 229/340 (67%), Positives = 262/340 (77%), Gaps = 6/340 (1%)
 Frame = +2

Query: 20   SLMLILRPPSP---PLSGASRPR---LLPSTRLAPLLIVXXXXXXXXXXGRTEDDYHAIL 181
            SL+L   PP+P    +   S P+   L+  +   PL I            R++DDYHA L
Sbjct: 3    SLLLHHLPPTPLSTTIKIRSHPKPSSLVQGSTRTPLCITC---------ARSQDDYHATL 53

Query: 182  KALNSNGRRVPRKSLGQHYMLNSSVNEELVNVAGVNDGDLVLEIGPGTGSLTNVLIKAGA 361
             ALNS GR  PRKSLGQHYMLNSS+NE+L + A + DGD++LEIGPGTGSLTNVL+ AGA
Sbjct: 54   DALNSKGR-TPRKSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLTNVLLDAGA 112

Query: 362  SVIAIEKDPHMVVLVKERFGSTDQLMVLQEDFTKCHIRSQLSSFMESKNSTGHELKRAKV 541
            +V+AIEKD HM  LV+ERF  TD+L VLQEDF KCHI   L S +ESK +   E + AKV
Sbjct: 113  TVLAIEKDAHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLFSLLESKKAKNKESRYAKV 172

Query: 542  VANIPFNISTDVVKQLLPMGDIISDVVLLLQDEAALRLTDVSLRKTEHRPVNIFVNFYSD 721
            V+NIPFNISTDVVK LLPMGDI S+VVLLLQDE ALRL + SLR  E+RP+NIFVNFYSD
Sbjct: 173  VSNIPFNISTDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPINIFVNFYSD 232

Query: 722  PEYKFKVERSNFFPQPNVDAAVVRFKLKLISDYPPVISTKSFFSMVNSAFNGKRKMLRRS 901
            PEYKFKV R+NFFPQPNVDAAVV FKLK   DYPPV S KSFFS+VNSAFNGKRKMLRRS
Sbjct: 233  PEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNGKRKMLRRS 292

Query: 902  LQHICSALEIEAALMNVGLPTTSRPEELTLDDFVKLHNEI 1021
            LQHIC+++EIE AL NVGLP TSRPEELTLDDFV+LHN I
Sbjct: 293  LQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLI 332


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
            gi|223548969|gb|EEF50458.1| dimethyladenosine
            transferase, putative [Ricinus communis]
          Length = 338

 Score =  423 bits (1087), Expect = e-116
 Identities = 214/290 (73%), Positives = 243/290 (83%)
 Frame = +2

Query: 152  RTEDDYHAILKALNSNGRRVPRKSLGQHYMLNSSVNEELVNVAGVNDGDLVLEIGPGTGS 331
            R+ DDY A LKALNS GRR PRKSLGQHYMLNS VNE+LV  A V +GDLVLEIGPGTGS
Sbjct: 47   RSSDDYRATLKALNSRGRR-PRKSLGQHYMLNSEVNEQLVCAANVEEGDLVLEIGPGTGS 105

Query: 332  LTNVLIKAGASVIAIEKDPHMVVLVKERFGSTDQLMVLQEDFTKCHIRSQLSSFMESKNS 511
            LTN+L+  GA+V+AIEKD HM  +V+ERF  TD+  +LQEDF KCHIR  + S +E+  S
Sbjct: 106  LTNLLLDTGATVLAIEKDAHMAAIVRERFSHTDRFKLLQEDFVKCHIRFHMLSLLENMTS 165

Query: 512  TGHELKRAKVVANIPFNISTDVVKQLLPMGDIISDVVLLLQDEAALRLTDVSLRKTEHRP 691
               + +RAKVVANIPFNISTDVVKQLLPMGDIIS+V LLLQ+E A RL + SLR +E+RP
Sbjct: 166  LNEKPRRAKVVANIPFNISTDVVKQLLPMGDIISEVALLLQEETASRLVESSLRTSEYRP 225

Query: 692  VNIFVNFYSDPEYKFKVERSNFFPQPNVDAAVVRFKLKLISDYPPVISTKSFFSMVNSAF 871
            +N+FVNFYSDP YKFKV RSNFFPQPNVDAAVV FKLK  +DYP V S+KSFFS+VNSAF
Sbjct: 226  INVFVNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFKLKQTADYPAVSSSKSFFSLVNSAF 285

Query: 872  NGKRKMLRRSLQHICSALEIEAALMNVGLPTTSRPEELTLDDFVKLHNEI 1021
            NGKRKMLRRSLQHIC++ EIE AL+NVGLP TSRPEELTLDDFVKLHN I
Sbjct: 286  NGKRKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLDDFVKLHNLI 335


>ref|XP_003534590.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  407 bits (1047), Expect = e-111
 Identities = 210/290 (72%), Positives = 238/290 (82%)
 Frame = +2

Query: 152  RTEDDYHAILKALNSNGRRVPRKSLGQHYMLNSSVNEELVNVAGVNDGDLVLEIGPGTGS 331
            R+ DDYHA LKALNS GR  PRKSLGQHYMLN+ +N++L   AGV  GD+VLEIGPGTGS
Sbjct: 53   RSADDYHATLKALNSKGR-FPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGS 111

Query: 332  LTNVLIKAGASVIAIEKDPHMVVLVKERFGSTDQLMVLQEDFTKCHIRSQLSSFMESKNS 511
            LTNVL+ +GA V+A+EKD HM  LV ERF ST +L VL ED  KCH+RS +SS + S N 
Sbjct: 112  LTNVLLNSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSINP 171

Query: 512  TGHELKRAKVVANIPFNISTDVVKQLLPMGDIISDVVLLLQDEAALRLTDVSLRKTEHRP 691
               E ++AKVVANIPFNISTDV+K LLPMGDI S+VVLLLQ+E A+RL   SLR  E+RP
Sbjct: 172  ---ESRKAKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRP 228

Query: 692  VNIFVNFYSDPEYKFKVERSNFFPQPNVDAAVVRFKLKLISDYPPVISTKSFFSMVNSAF 871
            VN+FVNFYSDPEYK KV RSNFFPQPNVDAAVV FKLKL S+YP V STKSFFSMVNSAF
Sbjct: 229  VNVFVNFYSDPEYKLKVPRSNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAF 288

Query: 872  NGKRKMLRRSLQHICSALEIEAALMNVGLPTTSRPEELTLDDFVKLHNEI 1021
            N KRKMLR+SLQHIC++LEIE AL ++GL  TSRPEELTLDDFVKLHN I
Sbjct: 289  NEKRKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLI 338


>ref|XP_003623846.1| Ribosomal RNA small subunit methyltransferase A [Medicago truncatula]
            gi|124360236|gb|ABN08249.1| SAM (and some other
            nucleotide) binding motif [Medicago truncatula]
            gi|124360864|gb|ABN08836.1| SAM (and some other
            nucleotide) binding motif [Medicago truncatula]
            gi|355498861|gb|AES80064.1| Ribosomal RNA small subunit
            methyltransferase A [Medicago truncatula]
          Length = 349

 Score =  405 bits (1041), Expect = e-111
 Identities = 205/288 (71%), Positives = 237/288 (82%)
 Frame = +2

Query: 158  EDDYHAILKALNSNGRRVPRKSLGQHYMLNSSVNEELVNVAGVNDGDLVLEIGPGTGSLT 337
            +DDYHA LKALNS GR  P+KSLGQ+YMLNS +NE+LV VAGV +GD+VLEIGPGTGSLT
Sbjct: 60   KDDYHATLKALNSKGRS-PKKSLGQNYMLNSDINEQLVGVAGVEEGDVVLEIGPGTGSLT 118

Query: 338  NVLIKAGASVIAIEKDPHMVVLVKERFGSTDQLMVLQEDFTKCHIRSQLSSFMESKNSTG 517
            N LI +GA V+A+EKD HM  LV ERF ST +L VL ED  KCH+RS +SS + S     
Sbjct: 119  NTLINSGAFVLAVEKDKHMAALVSERFSSTGKLKVLNEDIVKCHVRSHISSLVGSTEDID 178

Query: 518  HELKRAKVVANIPFNISTDVVKQLLPMGDIISDVVLLLQDEAALRLTDVSLRKTEHRPVN 697
             + ++AKVVANIPF ISTDV+K LLPMGDI S+VVLLLQ+E ALR  + SLR  E+RP+N
Sbjct: 179  SDTRKAKVVANIPFYISTDVIKLLLPMGDIFSEVVLLLQEETALRWVEPSLRTPEYRPIN 238

Query: 698  IFVNFYSDPEYKFKVERSNFFPQPNVDAAVVRFKLKLISDYPPVISTKSFFSMVNSAFNG 877
            IFVNFYSDPEYKFKV R+NFFPQPNVDAAVV FKLK  S+YP V S KSFFSMVNSAFN 
Sbjct: 239  IFVNFYSDPEYKFKVARTNFFPQPNVDAAVVSFKLKQPSEYPQVSSNKSFFSMVNSAFNE 298

Query: 878  KRKMLRRSLQHICSALEIEAALMNVGLPTTSRPEELTLDDFVKLHNEI 1021
            KRKM+R+SLQHIC++LEIE AL ++GL +TSRPEELTLDDFVKLHN I
Sbjct: 299  KRKMIRKSLQHICTSLEIEEALESIGLLSTSRPEELTLDDFVKLHNSI 346


>ref|XP_003552364.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Glycine max]
          Length = 341

 Score =  404 bits (1039), Expect = e-110
 Identities = 207/290 (71%), Positives = 238/290 (82%)
 Frame = +2

Query: 152  RTEDDYHAILKALNSNGRRVPRKSLGQHYMLNSSVNEELVNVAGVNDGDLVLEIGPGTGS 331
            R+ DDYHA LKALNS GR  PRKSLGQHYMLN+ +N++L   AGV  GD+VLEIGPGTGS
Sbjct: 53   RSADDYHATLKALNSKGR-FPRKSLGQHYMLNADINDQLAGAAGVEQGDVVLEIGPGTGS 111

Query: 332  LTNVLIKAGASVIAIEKDPHMVVLVKERFGSTDQLMVLQEDFTKCHIRSQLSSFMESKNS 511
            LTNVL+ +GA V+A+EKD HM  LV ERF ST +L VL ED  KCH+RS +SS + S N 
Sbjct: 112  LTNVLLNSGAFVLAVEKDKHMAALVSERFSSTGKLKVLTEDIVKCHVRSHMSSLVGSINP 171

Query: 512  TGHELKRAKVVANIPFNISTDVVKQLLPMGDIISDVVLLLQDEAALRLTDVSLRKTEHRP 691
               E ++AKVVANIPFNISTDV+K LLPMGDI S+VVLLLQ+E A+RL   SLR  E+RP
Sbjct: 172  ---ESRKAKVVANIPFNISTDVIKLLLPMGDIFSEVVLLLQEETAVRLVVSSLRTPEYRP 228

Query: 692  VNIFVNFYSDPEYKFKVERSNFFPQPNVDAAVVRFKLKLISDYPPVISTKSFFSMVNSAF 871
            +N+FVNFYSDPEYK +V R+NFFPQPNVDAAVV FKLKL S+YP V STKSFFSMVNSAF
Sbjct: 229  INVFVNFYSDPEYKLEVPRTNFFPQPNVDAAVVSFKLKLPSEYPQVSSTKSFFSMVNSAF 288

Query: 872  NGKRKMLRRSLQHICSALEIEAALMNVGLPTTSRPEELTLDDFVKLHNEI 1021
            N KRKMLR+SLQHIC++LEIE AL ++GL  TSRPEELTLDDFVKLHN I
Sbjct: 289  NEKRKMLRKSLQHICTSLEIEEALTSIGLLATSRPEELTLDDFVKLHNLI 338