BLASTX nr result

ID: Dioscorea21_contig00021635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021635
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    86   4e-15
ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    84   2e-14
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...    82   5e-14
ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago trun...    82   5e-14
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...    81   8e-14

>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 37/41 (90%), Positives = 41/41 (100%)
 Frame = +3

Query: 102 ISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFK 224
           IS+DLYPSQDDLLYEEE+LRNPFSLKLWWRYL+ARA+APFK
Sbjct: 3   ISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFK 43


>ref|XP_003543085.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 919

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/42 (83%), Positives = 42/42 (100%)
 Frame = +3

Query: 99  VISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFK 224
           VI++DLYPS+DDLLYEEE+LRNPFSLKLWWRYL+AR++APFK
Sbjct: 2   VIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFK 43


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 34/41 (82%), Positives = 41/41 (100%)
 Frame = +3

Query: 102 ISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFK 224
           I++DLYPS+DDLLYEEE+LRNPFSLKLWWRYL+AR++APFK
Sbjct: 3   IAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFK 43


>ref|XP_003593448.1| Pre-mRNA-splicing factor SYF1 [Medicago truncatula]
           gi|355482496|gb|AES63699.1| Pre-mRNA-splicing factor
           SYF1 [Medicago truncatula]
          Length = 925

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = +3

Query: 93  VGVISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFK 224
           +  IS DLYPS+DDL+YEEE+LRNPFSLKLWWRYL+AR+D+PFK
Sbjct: 1   MAAISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFK 44


>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/41 (82%), Positives = 41/41 (100%)
 Frame = +3

Query: 102 ISEDLYPSQDDLLYEEEILRNPFSLKLWWRYLVARADAPFK 224
           IS+DLYPSQ+DLLYEEE+LRNPFSLKLWWRYL+A+A++PFK
Sbjct: 3   ISKDLYPSQEDLLYEEELLRNPFSLKLWWRYLIAKAESPFK 43


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