BLASTX nr result

ID: Dioscorea21_contig00021619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021619
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD02178.1| putative kelch repeat containing F-box protein [P...   146   2e-33
ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   140   1e-31
ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74...   139   2e-31
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_004135184.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   137   9e-31

>gb|AFD02178.1| putative kelch repeat containing F-box protein [Persicaria minor]
          Length = 487

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/137 (55%), Positives = 92/137 (67%)
 Frame = +3

Query: 36  SEESGEVTQGGDSVKXXXXXXXLPEVSDCPGSQEMELPGNESNQEGVTGEYSDTNSLIHP 215
           S ++GE  QGGD               D PG Q          Q+G  G+ SDT++LIHP
Sbjct: 110 SAQTGEQQQGGD---------------DQPGDQ----------QQG--GDQSDTDNLIHP 142

Query: 216 IGRDISINCLLYHCSRSDYGAIASLNSSFRSLIRSGLLYKLRRLNKITEHWIYFSCNVLE 395
           IGRDI+INCLL HCSR+DYG+IASLN  FRSL+RSG +YKLRR+N + EHW+YFSC +LE
Sbjct: 143 IGRDITINCLL-HCSRADYGSIASLNRGFRSLVRSGEMYKLRRMNGVVEHWVYFSCQLLE 201

Query: 396 WEAYDPYRGRWMTLPRM 446
           W A+DP   RWM LPRM
Sbjct: 202 WVAFDPVARRWMNLPRM 218


>ref|XP_003570649.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Brachypodium
           distachyon]
          Length = 427

 Score =  140 bits (352), Expect = 1e-31
 Identities = 79/148 (53%), Positives = 95/148 (64%)
 Frame = +3

Query: 3   LLEISKGKRSLSEESGEVTQGGDSVKXXXXXXXLPEVSDCPGSQEMELPGNESNQEGVTG 182
           LLEI++ KR     SG +    D +         P+  D    + ++  G  SN +G   
Sbjct: 30  LLEITRTKRP----SGVLAIEQDGIAVVAVSAKRPKSEDKNNDEPVDCQG--SNGQG--- 80

Query: 183 EYSDTNSLIHPIGRDISINCLLYHCSRSDYGAIASLNSSFRSLIRSGLLYKLRRLNKITE 362
            YSD+++LI  IGRD SINCL   CSRSDYG+IASLN +FRSL+R G LYK RR   I E
Sbjct: 81  -YSDSSTLISSIGRDNSINCLA-RCSRSDYGSIASLNRNFRSLVRDGGLYKERRRLGIAE 138

Query: 363 HWIYFSCNVLEWEAYDPYRGRWMTLPRM 446
           HW+YFSCNV EWEAYDPYR RWMTLPRM
Sbjct: 139 HWVYFSCNVQEWEAYDPYRSRWMTLPRM 166


>ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/150 (50%), Positives = 99/150 (66%), Gaps = 2/150 (1%)
 Frame = +3

Query: 3   LLEISKGKRSLS-EESGEVTQGGDSVKXXXXXXXLPEVSDCPGS-QEMELPGNESNQEGV 176
           ++E++  KR L  EE   +T+              PE  +   S Q++ L  N++N +  
Sbjct: 30  VMELASNKRRLELEEEAVLTKS-------CKLSDAPEKGETKKSIQDLSLSVNQANAQNH 82

Query: 177 TGEYSDTNSLIHPIGRDISINCLLYHCSRSDYGAIASLNSSFRSLIRSGLLYKLRRLNKI 356
           + + SD++SLI  +GRDISINCLL  CSRSDYG++ASLN SFRSLIR+G LY+LRR   I
Sbjct: 83  SSDQSDSSSLIFQLGRDISINCLL-RCSRSDYGSVASLNQSFRSLIRTGELYRLRRQMSI 141

Query: 357 TEHWIYFSCNVLEWEAYDPYRGRWMTLPRM 446
            EHW+YFSCN+ EWEA+DP   RWM LPRM
Sbjct: 142 IEHWVYFSCNLPEWEAFDPNTRRWMRLPRM 171


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/148 (52%), Positives = 93/148 (62%)
 Frame = +3

Query: 3   LLEISKGKRSLSEESGEVTQGGDSVKXXXXXXXLPEVSDCPGSQEMELPGNESNQEGVTG 182
           ++E+S  KR L +   E  QG               + D   SQ      N+SN    TG
Sbjct: 95  VIELSNSKRPLEDGEDETMQG---------------LHDLSLSQ-----ANQSNTHHDTG 134

Query: 183 EYSDTNSLIHPIGRDISINCLLYHCSRSDYGAIASLNSSFRSLIRSGLLYKLRRLNKITE 362
           + SD +SLI  IGRD SINCLL  CSRSDYG+IASLN SFRSLIR G LY+LRR   I E
Sbjct: 135 DQSDLSSLISQIGRDNSINCLL-QCSRSDYGSIASLNRSFRSLIRGGELYRLRRKLGIVE 193

Query: 363 HWIYFSCNVLEWEAYDPYRGRWMTLPRM 446
           HW+YFSC++L+WEA+DP R RWM LPRM
Sbjct: 194 HWVYFSCDLLQWEAFDPIRRRWMHLPRM 221


>ref|XP_004135184.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Cucumis sativus]
           gi|449533767|ref|XP_004173843.1| PREDICTED:
           F-box/kelch-repeat protein SKIP11-like [Cucumis sativus]
          Length = 435

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = +3

Query: 162 NQEGVTGEYSDTNSLIHPIGRDISINCLLYHCSRSDYGAIASLNSSFRSLIRSGLLYKLR 341
           N E  +G+ SD+ SLI  IGRD SINCL+  CSRSDYG+IASLN SFR LIR+G LYKLR
Sbjct: 72  NDESDSGDSSDSGSLISSIGRDNSINCLI-RCSRSDYGSIASLNRSFRKLIRNGELYKLR 130

Query: 342 RLNKITEHWIYFSCNVLEWEAYDPYRGRWMTLPRM 446
           RLN + EHW+YFSC++LEWEA+DP + RWM LPRM
Sbjct: 131 RLNDVIEHWVYFSCHLLEWEAFDPIQRRWMHLPRM 165


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