BLASTX nr result
ID: Dioscorea21_contig00021609
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021609 (518 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-l... 84 9e-15 dbj|BAJ96519.1| predicted protein [Hordeum vulgare subsp. vulgare] 84 1e-14 gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare] 84 1e-14 ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group] g... 84 2e-14 gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japo... 84 2e-14 >ref|XP_003563083.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Brachypodium distachyon] Length = 1192 Score = 84.3 bits (207), Expect = 9e-15 Identities = 61/136 (44%), Positives = 73/136 (53%), Gaps = 6/136 (4%) Frame = +3 Query: 114 GFAVDKYHECLQKLNDEPREEAACADISVLLMIMAGTGSRTDMGDCWVCSDAASRAIAPY 293 G A KY+E L LND RE AAC+D++V LMI+AG GS Sbjct: 301 GCAPRKYYEYLHSLNDRQRE-AACSDVTVPLMILAGPGSGKT------------------ 341 Query: 294 *LYFSDFIGYVQTLILLIRVSSLP--NILALNVTIAAA----DRIGSVRPKEVAKKLSIS 455 S +G V TL+ +P NILA+ T AAA DRIG+V K VAK++ IS Sbjct: 342 ----STMVGRVLTLLK----EGIPPSNILAMTFTTAAAAEMRDRIGAVVGKAVAKEIVIS 393 Query: 456 TFHSFCLQLCR*HTRK 503 TFHSFCLQLCR H K Sbjct: 394 TFHSFCLQLCRNHAEK 409 >dbj|BAJ96519.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 774 Score = 84.0 bits (206), Expect = 1e-14 Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 4/134 (2%) Frame = +3 Query: 114 GFAVDKYHECLQKLNDEPREEAACADISVLLMIMAGTGSRTDMGDCWVCSDAASRAIAPY 293 G A KY+E L LND+ RE A+C+D++V LMI+AG GS Sbjct: 294 GCAPRKYYEYLHSLNDKQRE-ASCSDVAVPLMIVAGPGSGKT------------------ 334 Query: 294 *LYFSDFIGYVQTLILLIRVSSLPNILALNVTIAAA----DRIGSVRPKEVAKKLSISTF 461 S +G V TL L S NILA+ T AAA DRIG+V K VAK++ ISTF Sbjct: 335 ----STMVGRVLTL--LKEGISPSNILAMTFTTAAASEMRDRIGAVVGKAVAKEIIISTF 388 Query: 462 HSFCLQLCR*HTRK 503 HSFCLQLCR H K Sbjct: 389 HSFCLQLCRTHAEK 402 >gb|ADJ94112.1| UvrD helicase [Hordeum vulgare subsp. vulgare] Length = 1185 Score = 84.0 bits (206), Expect = 1e-14 Identities = 61/134 (45%), Positives = 73/134 (54%), Gaps = 4/134 (2%) Frame = +3 Query: 114 GFAVDKYHECLQKLNDEPREEAACADISVLLMIMAGTGSRTDMGDCWVCSDAASRAIAPY 293 G A KY+E L LND+ RE A+C+D++V LMI+AG GS Sbjct: 294 GCAPRKYYEYLHSLNDKQRE-ASCSDVAVPLMIVAGPGSGKT------------------ 334 Query: 294 *LYFSDFIGYVQTLILLIRVSSLPNILALNVTIAAA----DRIGSVRPKEVAKKLSISTF 461 S +G V TL L S NILA+ T AAA DRIG+V K VAK++ ISTF Sbjct: 335 ----STMVGRVLTL--LKEGISPSNILAMTFTTAAASEMRDRIGAVVGKAVAKEIIISTF 388 Query: 462 HSFCLQLCR*HTRK 503 HSFCLQLCR H K Sbjct: 389 HSFCLQLCRTHAEK 402 >ref|NP_001059683.1| Os07g0492100 [Oryza sativa Japonica Group] gi|34393626|dbj|BAC83302.1| putative ATP-dependent DNA helicase [Oryza sativa Japonica Group] gi|50508450|dbj|BAD30552.1| putative ATP-dependent DNA helicase [Oryza sativa Japonica Group] gi|113611219|dbj|BAF21597.1| Os07g0492100 [Oryza sativa Japonica Group] gi|218199642|gb|EEC82069.1| hypothetical protein OsI_26061 [Oryza sativa Indica Group] Length = 1165 Score = 83.6 bits (205), Expect = 2e-14 Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 4/134 (2%) Frame = +3 Query: 114 GFAVDKYHECLQKLNDEPREEAACADISVLLMIMAGTGSRTDMGDCWVCSDAASRAIAPY 293 G KY+E LQ LND RE AAC+D+++ LMI+AG GS Sbjct: 274 GCVPKKYYEYLQSLNDRQRE-AACSDVTIPLMIVAGPGSGKT------------------ 314 Query: 294 *LYFSDFIGYVQTLILLIRVSSLPNILALNVTIAAA----DRIGSVRPKEVAKKLSISTF 461 S +G V TL+ S NILA+ T AAA DRIG+V K VAK++ ISTF Sbjct: 315 ----STMVGRVLTLLKEEFPPS--NILAMTFTTAAASEMRDRIGTVVGKAVAKEIVISTF 368 Query: 462 HSFCLQLCR*HTRK 503 HSFCLQLCR H K Sbjct: 369 HSFCLQLCRTHAEK 382 >gb|EEE67198.1| hypothetical protein OsJ_24304 [Oryza sativa Japonica Group] Length = 1186 Score = 83.6 bits (205), Expect = 2e-14 Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 4/134 (2%) Frame = +3 Query: 114 GFAVDKYHECLQKLNDEPREEAACADISVLLMIMAGTGSRTDMGDCWVCSDAASRAIAPY 293 G KY+E LQ LND RE AAC+D+++ LMI+AG GS Sbjct: 274 GCVPKKYYEYLQSLNDRQRE-AACSDVTIPLMIVAGPGSGKT------------------ 314 Query: 294 *LYFSDFIGYVQTLILLIRVSSLPNILALNVTIAAA----DRIGSVRPKEVAKKLSISTF 461 S +G V TL+ S NILA+ T AAA DRIG+V K VAK++ ISTF Sbjct: 315 ----STMVGRVLTLLKEEFPPS--NILAMTFTTAAASEMRDRIGTVVGKAVAKEIVISTF 368 Query: 462 HSFCLQLCR*HTRK 503 HSFCLQLCR H K Sbjct: 369 HSFCLQLCRTHAEK 382