BLASTX nr result

ID: Dioscorea21_contig00021561 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021561
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG26324.1| 4-coumarate-CoA ligase [Cinnamomum osmophloeum]        208   6e-52
gb|ACT32027.1| 4-coumarate:CoA ligase 1 [Gossypium hirsutum]          204   1e-50
ref|XP_002520028.1| AMP dependent CoA ligase, putative [Ricinus ...   204   1e-50
ref|XP_002325815.1| 4-Coumarate:CoA ligase [Populus trichocarpa]...   204   1e-50
gb|AAK58909.1| 4-coumarate:CoA ligase 4 [Populus trichocarpa x P...   204   1e-50

>gb|AFG26324.1| 4-coumarate-CoA ligase [Cinnamomum osmophloeum]
          Length = 565

 Score =  208 bits (530), Expect = 6e-52
 Identities = 105/174 (60%), Positives = 126/174 (72%), Gaps = 4/174 (2%)
 Frame = +3

Query: 114 IFRSRLPDIPIPNHLPLHTYCFENLSSFSDYPCLISGVSGKTYTFSETHLICRKTAAAFS 293
           IFRS+LPDIPI NHLPLHTYCFE ++ FSD PCLISG SG+ YTF+ETHLIC+K+AA  S
Sbjct: 29  IFRSKLPDIPISNHLPLHTYCFEKITEFSDAPCLISGSSGRIYTFAETHLICQKSAAGLS 88

Query: 294 NLGIKQGDVILILLQNSPEFLFTFMAASFLGATTTAANPFYTPSEISKQFNASNAKLIVT 473
            LGIK+GDVI+ILLQNSPEF F+FM AS +GA TT ANPF T +EI KQF+ S AKL++T
Sbjct: 89  KLGIKKGDVIMILLQNSPEFAFSFMGASMIGAITTTANPFCTSAEIFKQFSVSGAKLVIT 148

Query: 474 QSLYIDKLQD----LXXXXXXXXXXXXXXXXEQCLNFNSIIQDADENSIPEITI 623
           QS Y+DKL+D                     E CL+F S+I  ADE  IP ++I
Sbjct: 149 QSQYVDKLRDTGEKFPKIGEDFTVITVDDPPESCLHF-SVISGADEREIPSVSI 201


>gb|ACT32027.1| 4-coumarate:CoA ligase 1 [Gossypium hirsutum]
          Length = 573

 Score =  204 bits (519), Expect = 1e-50
 Identities = 105/179 (58%), Positives = 125/179 (69%), Gaps = 9/179 (5%)
 Frame = +3

Query: 114 IFRSRLPDIPIPNHLPLHTYCFENLSSFSDYPCLISGVSGKTYTFSETHLICRKTAAAFS 293
           IFRS+LPDIPI NHLPLHTYCFENL S SD PCLISG SGK Y+FSETHLI +KTAA  S
Sbjct: 28  IFRSKLPDIPISNHLPLHTYCFENLPSLSDKPCLISGSSGKIYSFSETHLIAQKTAAGLS 87

Query: 294 NLGIKQGDVILILLQNSPEFLFTFMAASFLGATTTAANPFYTPSEISKQFNASNAKLIVT 473
           NLGI++GD I+ILL N  EF+F FM AS +GA +T ANPFYT  EI KQF A+ AKLI+T
Sbjct: 88  NLGIQKGDAIMILLHNCAEFVFAFMGASMIGAVSTTANPFYTSKEIFKQFKAARAKLIIT 147

Query: 474 QSLYIDKLQD---------LXXXXXXXXXXXXXXXXEQCLNFNSIIQDADENSIPEITI 623
           QS Y+DKL+D                          E CL+F S++ +A+EN IP++TI
Sbjct: 148 QSQYVDKLKDTNNNDGDENFPKIGEDFKVITIDDPPENCLDF-SMLSEANENEIPQVTI 205


>ref|XP_002520028.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223540792|gb|EEF42352.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 573

 Score =  204 bits (519), Expect = 1e-50
 Identities = 103/173 (59%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
 Frame = +3

Query: 114 IFRSRLPDIPIPNHLPLHTYCFENLSSFSDYPCLISGVSGKTYTFSETHLICRKTAAAFS 293
           IFRS+LPDIPI NHLPLHTYCFENL   SD PCLISG +GKTY+F+ETHLI +KTAA  S
Sbjct: 34  IFRSKLPDIPISNHLPLHTYCFENLFKLSDKPCLISGSTGKTYSFAETHLISQKTAAGLS 93

Query: 294 NLGIKQGDVILILLQNSPEFLFTFMAASFLGATTTAANPFYTPSEISKQFNASNAKLIVT 473
           +LGIK+GDVI+ILLQN PEF+F+FM AS +GA  T ANPFYT +EI KQ N+S  KLI+T
Sbjct: 94  SLGIKKGDVIMILLQNCPEFVFSFMGASMIGAVATTANPFYTSNEIFKQLNSSRPKLIIT 153

Query: 474 QSLYIDKLQD-----LXXXXXXXXXXXXXXXXEQCLNFNSIIQDADENSIPEI 617
           QSLY+DKL+D                      E CL+F +++ +A E  IPE+
Sbjct: 154 QSLYVDKLRDPDHKIQPKLGEDFTVITIDEPPENCLHF-TVLSEASETEIPEV 205


>ref|XP_002325815.1| 4-Coumarate:CoA ligase [Populus trichocarpa]
           gi|118487236|gb|ABK95446.1| unknown [Populus
           trichocarpa] gi|222862690|gb|EEF00197.1| 4-Coumarate:CoA
           ligase [Populus trichocarpa]
          Length = 570

 Score =  204 bits (518), Expect = 1e-50
 Identities = 103/176 (58%), Positives = 127/176 (72%), Gaps = 6/176 (3%)
 Frame = +3

Query: 114 IFRSRLPDIPIPNHLPLHTYCFENLSSFSDYPCLISGVSGKTYTFSETHLICRKTAAAFS 293
           IFRS+LPDI I NHLPLH YCFENLS FSD PCLISG +GKTY+F+ETHLI RK AA  S
Sbjct: 31  IFRSKLPDITISNHLPLHAYCFENLSDFSDRPCLISGSTGKTYSFAETHLISRKVAAGLS 90

Query: 294 NLGIKQGDVILILLQNSPEFLFTFMAASFLGATTTAANPFYTPSEISKQFNASNAKLIVT 473
           NLGIK+GDVI+ LLQN PEF+F+FM AS +GA TT  NPFYTP EI KQF+AS AKLI+T
Sbjct: 91  NLGIKKGDVIMTLLQNCPEFVFSFMGASMIGAVTTTVNPFYTPGEIFKQFSASRAKLIIT 150

Query: 474 QSLYIDKLQDL------XXXXXXXXXXXXXXXXEQCLNFNSIIQDADENSIPEITI 623
           QS +++KL+D                       E CL+FN ++ +A+E+ +P ++I
Sbjct: 151 QSQHVNKLRDSDCHENNQKPEEDFIVITIDDPPENCLHFN-VLVEANESEMPTVSI 205


>gb|AAK58909.1| 4-coumarate:CoA ligase 4 [Populus trichocarpa x Populus deltoides]
          Length = 579

 Score =  204 bits (518), Expect = 1e-50
 Identities = 103/176 (58%), Positives = 127/176 (72%), Gaps = 6/176 (3%)
 Frame = +3

Query: 114 IFRSRLPDIPIPNHLPLHTYCFENLSSFSDYPCLISGVSGKTYTFSETHLICRKTAAAFS 293
           IFRS+LPDI I NHLPLH YCFENLS FSD PCLISG +GKTY+F+ETHLI RK AA  S
Sbjct: 31  IFRSKLPDITISNHLPLHAYCFENLSDFSDRPCLISGSTGKTYSFAETHLISRKVAAGLS 90

Query: 294 NLGIKQGDVILILLQNSPEFLFTFMAASFLGATTTAANPFYTPSEISKQFNASNAKLIVT 473
           NLGIK+GDVI+ LLQN PEF+F+FM AS +GA TT  NPFYTP EI KQF+AS AKLI+T
Sbjct: 91  NLGIKKGDVIMTLLQNCPEFVFSFMGASMIGAVTTTVNPFYTPGEIFKQFSASRAKLIIT 150

Query: 474 QSLYIDKLQDL------XXXXXXXXXXXXXXXXEQCLNFNSIIQDADENSIPEITI 623
           QS +++KL+D                       E CL+FN ++ +A+E+ +P ++I
Sbjct: 151 QSQHVNKLRDSDYHENNQKPEEDFIVITIDDPPENCLHFN-VLVEANESEMPTVSI 205


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