BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021546
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42
emb|CBI30808.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_002519753.1| pentatricopeptide repeat-containing protein,...   159   2e-37
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   158   5e-37

>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/142 (59%), Positives = 107/142 (75%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           KH  AL  F +M+  G+ PNQS+FTSALNSCCGLEALD GR+IH  A K G + DVFVGN
Sbjct: 284 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 343

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SL+V+Y +CG + DG+ +F  + ++N+VSWNSVI+GCAQ+G  + AL +F+ MV   V+P
Sbjct: 344 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 403

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           DEITF GLL+ACSHS M  K R
Sbjct: 404 DEITFTGLLSACSHSGMSQKGR 425



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
 Frame = +2

Query: 14  ALDEFQKMILHGIT--PNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGNSL 187
           AL  F++M+  G+   P  ST+   + +C    AL +G +IHA   K G+  D ++  +L
Sbjct: 185 ALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAAL 244

Query: 188 VVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQPDE 367
           +  Y+ C  + D L+VF      N+V W +++ G   N    DALK F  M+   V P++
Sbjct: 245 ITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQ 304

Query: 368 ITFIGLLTACSHSRMLDKAR 427
            +F   L +C     LD  R
Sbjct: 305 SSFTSALNSCCGLEALDWGR 324


>emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/142 (59%), Positives = 107/142 (75%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           KH  AL  F +M+  G+ PNQS+FTSALNSCCGLEALD GR+IH  A K G + DVFVGN
Sbjct: 268 KHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGN 327

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SL+V+Y +CG + DG+ +F  + ++N+VSWNSVI+GCAQ+G  + AL +F+ MV   V+P
Sbjct: 328 SLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEP 387

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           DEITF GLL+ACSHS M  K R
Sbjct: 388 DEITFTGLLSACSHSGMSQKGR 409



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
 Frame = +2

Query: 14  ALDEFQKMILHGIT--PNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGNSL 187
           AL  F++M+  G+   P  ST+   + +C    AL +G +IHA   K G+  D ++  +L
Sbjct: 169 ALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAAL 228

Query: 188 VVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQPDE 367
           +  Y+ C  + D L+VF      N+V W +++ G   N    DALK F  M+   V P++
Sbjct: 229 ITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQ 288

Query: 368 ITFIGLLTACSHSRMLDKAR 427
            +F   L +C     LD  R
Sbjct: 289 SSFTSALNSCCGLEALDWGR 308


>ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
           gi|449533166|ref|XP_004173548.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/142 (57%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           +H  AL  F+ M+   + PNQS+ TSALNSCCGLEA+DRGR++HA A K G + D+FV N
Sbjct: 320 RHTDALQVFKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSN 379

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SLVV+Y+KCG I DG+ VF  M  +N+VSWNS+I+GCAQ+G+   AL  F  M+   V P
Sbjct: 380 SLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDP 439

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           DEIT  GLL+AC HS ML K R
Sbjct: 440 DEITLAGLLSACGHSGMLTKGR 461



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/142 (28%), Positives = 65/142 (45%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           + F AL  F KM L       ST   AL +C  +     G +IH    K G+  + ++  
Sbjct: 220 RSFEALVVFHKM-LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISA 278

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SL+  Y+ C  I +   +F+    RN+V W +++ G   N    DAL+ F  M+   V P
Sbjct: 279 SLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLP 338

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           ++ +    L +C     +D+ R
Sbjct: 339 NQSSLTSALNSCCGLEAVDRGR 360


>ref|XP_002519753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541170|gb|EEF42726.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 562

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/142 (56%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           KH  AL  F  MI  G+ PNQSTF SA NSC GLEALDRG++IH    K G + DVFVGN
Sbjct: 379 KHEDALRVFSDMIKMGVFPNQSTFISAFNSCRGLEALDRGKEIHTVTAKLGLETDVFVGN 438

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SLVV+Y++CG + D + VF  ++E+N VSWNS+I+G +Q+G+ + AL +F+ M+   V P
Sbjct: 439 SLVVMYNECGNVNDAVAVFKKIKEKNDVSWNSIIVGSSQHGHGIWALIFFNQMIRTCVDP 498

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           DEIT  GLL+ACSHS ML K R
Sbjct: 499 DEITLTGLLSACSHSGMLQKGR 520



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/138 (30%), Positives = 71/138 (51%)
 Frame = +2

Query: 14  ALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGNSLVV 193
           AL  F KM+  G+ P  +T+   L +C      + G ++H + +K G+  D F+  SL+ 
Sbjct: 282 ALILFGKMMDSGVKPTSTTYACVLTACANAMDFNMGVQVHGRVSKLGYKSDEFISASLIT 341

Query: 194 LYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQPDEIT 373
            YS C  + +  +VF+    +N+V W +++ GC  N    DAL+ F  M+   V P++ T
Sbjct: 342 FYSNCKQVKNAHQVFNETLSKNVVIWTALLTGCELNSKHEDALRVFSDMIKMGVFPNQST 401

Query: 374 FIGLLTACSHSRMLDKAR 427
           FI    +C     LD+ +
Sbjct: 402 FISAFNSCRGLEALDRGK 419



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = +2

Query: 164 DVFVGNSLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMV 343
           DV   N+++  Y     I DGL +F+ M  RN++SW S+I G  QNG + +AL  F  M+
Sbjct: 231 DVAAWNAMIFGYCGNRRIADGLNLFEKMPCRNVISWTSMIGGLDQNGKSEEALILFGKMM 290

Query: 344 YHHVQPDEITFIGLLTACSHS 406
              V+P   T+  +LTAC+++
Sbjct: 291 DSGVKPTSTTYACVLTACANA 311


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/142 (55%), Positives = 102/142 (71%)
 Frame = +2

Query: 2   KHFVALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHGFDIDVFVGN 181
           KH  AL+ F +M+   + PN+S+FTSALNSCCGLE ++RG+ IHA A K G +   +VG 
Sbjct: 329 KHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGG 388

Query: 182 SLVVLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQP 361
           SLVV+YSKCG + D + VF  + E+N+VSWNSVI+GCAQ+G  + AL  F+ M+   V P
Sbjct: 389 SLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDP 448

Query: 362 DEITFIGLLTACSHSRMLDKAR 427
           D IT  GLL+ACSHS ML KAR
Sbjct: 449 DGITVTGLLSACSHSGMLQKAR 470



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
 Frame = +2

Query: 14  ALDEFQKMILHGITPNQSTFTSALNSCCGLEALDRGRKIHAKATKHG-FDIDVFVGNSLV 190
           AL  F+ M+  G+  +       L++   + A   G +IH    K G +  D FV  SLV
Sbjct: 231 ALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLV 290

Query: 191 VLYSKCGAIYDGLKVFDIMEERNLVSWNSVIMGCAQNGYALDALKYFDYMVYHHVQPDEI 370
             Y+ C  +    +VF  +  +++V W +++ G   N    +AL+ F  M+   V P+E 
Sbjct: 291 TFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNES 350

Query: 371 TFIGLLTAC 397
           +F   L +C
Sbjct: 351 SFTSALNSC 359