BLASTX nr result
ID: Dioscorea21_contig00021545
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00021545
(2028 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi... 554 e-155
emb|CBI17575.3| unnamed protein product [Vitis vinifera] 549 e-154
ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containi... 516 e-144
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi... 510 e-142
ref|XP_003631109.1| Pentatricopeptide repeat-containing protein ... 498 e-138
>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
[Vitis vinifera]
Length = 519
Score = 554 bits (1427), Expect = e-155
Identities = 280/516 (54%), Positives = 363/516 (70%), Gaps = 2/516 (0%)
Frame = +3
Query: 33 MRTTISSISNLLRYSPWSSAQSQLHLLPIRWDSFTINQVLKTHPPMEKSWLFFNWASKLP 212
MR TI +IS +LRY W SAQ QL L IRWDS+T+NQVLK+HPPMEK+WLFFNWAS+L
Sbjct: 1 MRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKAWLFFNWASRLK 60
Query: 213 SFKHDHFTYTTMLDIFGEAGRIQSMLRVFQDMEEKGIAADAATYTSLMHWMGKAGDFDGA 392
FKHD FTYTTMLDIFGEA RI+SM VFQ M+EKGI DA TYTSLMHW GD + A
Sbjct: 61 GFKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIERA 120
Query: 393 IKAWEEMRSRGCRPTIVSYTAFIKVLFDHGRPREAARVYKEMLEVGLTPNCQTYTVLMEY 572
++ W+EM+++GC T+VSYTA++K+LFD+ R +EAA VYKEML+ G PNC TYTVLME+
Sbjct: 121 VRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLMEH 180
Query: 573 LAGEGKFDAVLEVMNKMQEVGIHPDKAMCNILVQKCSKAGETSVMAQILQFMKENFIVLR 752
L G GK+ A LE+ ++MQE G+ PDKA CNIL++K K G+T + QIL +MK+NF+VLR
Sbjct: 181 LTGSGKYKAALEIFSRMQEAGVQPDKATCNILIEKFCKTGQTWAITQILLYMKDNFLVLR 240
Query: 753 RPVFLEALEALKISGESDHLLREVNPHLSCE-GMVEEITDSEAAATDISSEKIDRGIIIN 929
PV+LEAL+ LK++GESD LLR+VNPHL+ EEI + + D+ S IDRG ++
Sbjct: 241 YPVYLEALQTLKVAGESDILLRQVNPHLNVGLSSKEEIVEFKETVADVHS-TIDRGFVLL 299
Query: 930 LLAMRNFVAIEHILSESLHRNLLLDSNIISAVVHANYATHRSTGALTAFEYCIKMRQILD 1109
L +NF AI+ +L+ +H+N LDS IIS ++ N A R GAL AFEY +KM ++
Sbjct: 300 FLTKQNFYAIDCLLTGMIHKNTRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIE 359
Query: 1110 KSAYXXXXXXXXXXXXYQKVLEIVEEMVRANICLGTYLVSLLIYKLGCSGFPAFSEKLYY 1289
+ AY + KV +IVE+MVRA I LG YL +LLIY+LGC+ P + K++
Sbjct: 360 RIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFG 419
Query: 1290 LCSTDQ-NTATCTALISAYLQAGEVEKGLDVYSRMRNEGIPFSVGTYAALIVGLEKAGRP 1466
L DQ TA TALISAY +G V+KGL +Y M+ + I ++GTY L+ GLEK GR
Sbjct: 420 LLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRA 479
Query: 1467 RDAEVYRKEKKRLEWCYHSRGTALLEESLCDCLFDG 1574
R+AE+YRKEKK L HS+ ++E +C+ LF G
Sbjct: 480 REAEIYRKEKKTLHTHGHSQDIVSMDEKICNLLFSG 515
>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 549 bits (1415), Expect = e-154
Identities = 281/529 (53%), Positives = 365/529 (68%), Gaps = 13/529 (2%)
Frame = +3
Query: 27 VYMRTTISSISNLLRYSPWSSAQSQLHLLPIRWDSFTINQVLKTHPPMEKSWLFFNWASK 206
+YMR TI +IS +LRY W SAQ QL L IRWDS+T+NQVLK+HPPMEK+WLFFNWAS+
Sbjct: 125 IYMRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKAWLFFNWASR 184
Query: 207 LPSFKHDHFTYTTMLDIFGEAGRIQSMLRVFQDMEEKGIAADAATYTSLMHWMGKAGDFD 386
L FKHD FTYTTMLDIFGEA RI+SM VFQ M+EKGI DA TYTSLMHW GD +
Sbjct: 185 LKGFKHDQFTYTTMLDIFGEARRIESMNYVFQQMQEKGIKTDAVTYTSLMHWFSNDGDIE 244
Query: 387 GAIKAWEEMRSRGCRPTIVSYTAFIKVLFDHGRPREAARVYKEMLEVGLTPNCQTYTVLM 566
A++ W+EM+++GC T+VSYTA++K+LFD+ R +EAA VYKEML+ G PNC TYTVLM
Sbjct: 245 RAVRVWKEMKAKGCCLTVVSYTAYMKILFDNKRVKEAADVYKEMLQSGCAPNCYTYTVLM 304
Query: 567 EYLAGEG-----------KFDAVLEVMNKMQEVGIHPDKAMCNILVQKCSKAGETSVMAQ 713
E+L G G K+ A LE+ ++MQE G+ PDKA CNIL++K K G+T + Q
Sbjct: 305 EHLTGSGKHLLQFSCIACKYKAALEIFSRMQEAGVQPDKATCNILIEKFCKTGQTWAITQ 364
Query: 714 ILQFMKENFIVLRRPVFLEALEALKISGESDHLLREVNPHLSCE-GMVEEITDSEAAATD 890
IL +MK+NF+VLR PV+LEAL+ LK++GESD LLR+VNPHL+ EEI + + D
Sbjct: 365 ILLYMKDNFLVLRYPVYLEALQTLKVAGESDILLRQVNPHLNVGLSSKEEIVEFKETVAD 424
Query: 891 ISSEKIDRGIIINLLAMRNFVAIEHILSESLHRNLLLDSNIISAVVHANYATHRSTGALT 1070
+ S IDRG ++ L +NF AI+ +L+ +H+N LDS IIS ++ N A R GAL
Sbjct: 425 VHS-TIDRGFVLLFLTKQNFYAIDCLLTGMIHKNTRLDSVIISQIIEVNCAHCRINGALL 483
Query: 1071 AFEYCIKMRQILDKSAYXXXXXXXXXXXXYQKVLEIVEEMVRANICLGTYLVSLLIYKLG 1250
AFEY +KM +++ AY + KV +IVE+MVRA I LG YL +LLIY+LG
Sbjct: 484 AFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGISLGMYLGALLIYRLG 543
Query: 1251 CSGFPAFSEKLYYLCSTDQ-NTATCTALISAYLQAGEVEKGLDVYSRMRNEGIPFSVGTY 1427
C+ P + K++ L DQ TA TALISAY +G V+KGL +Y M+ + I ++GTY
Sbjct: 544 CARRPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIYKTMQRKRIHPALGTY 603
Query: 1428 AALIVGLEKAGRPRDAEVYRKEKKRLEWCYHSRGTALLEESLCDCLFDG 1574
L+ GLEK GR R+AE+YRKEKK L HS+ ++E +C+ LF G
Sbjct: 604 NLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQDIVSMDEKICNLLFSG 652
>ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
[Cucumis sativus]
Length = 737
Score = 516 bits (1330), Expect = e-144
Identities = 259/519 (49%), Positives = 345/519 (66%), Gaps = 3/519 (0%)
Frame = +3
Query: 21 PPVYMRTTISSISNLLRYSPWSSAQSQLHLLPIRWDSFTINQVLKTHPPMEKSWLFFNWA 200
P +Y R T+ +I N+LR W+SAQ L +LPIRWDS+ INQVLKTHPP+EK+WLFFNWA
Sbjct: 132 PRLYTRDTVRNICNILRNCSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWA 191
Query: 201 SKLPSFKHDHFTYTTMLDIFGEAGRIQSMLRVFQDMEEKGIAADAATYTSLMHWMGKAGD 380
S L FKHD +TYTTMLDIFGEAGRI SM VFQ M+EKGI DA TYTSLMHW +GD
Sbjct: 192 STLQVFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGD 251
Query: 381 FDGAIKAWEEMRSRGCRPTIVSYTAFIKVLFDHGRPREAARVYKEMLEVGLTPNCQTYTV 560
DGAIK W+EM++ GC PT+VSYTA+IK+L D+G+ EA YK+ML+ GL+PNC TYT+
Sbjct: 252 VDGAIKVWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCTYTI 311
Query: 561 LMEYLAGEGKFDAVLEVMNKMQEVGIHPDKAMCNILVQKCSKAGETSVMAQILQFMKENF 740
LMEYL GEGK L++ +KMQ+ G++PDKA CNIL+QKC K+GE VM QIL+FMKEN
Sbjct: 312 LMEYLIGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENR 371
Query: 741 IVLRRPVFLEALEALKISGESDHLLREVNPHLSCEGMVE-EITDSEAAATDISSEKIDRG 917
VLR PVF+EA E LK S LL++VNPH+ E + + E+ D + + +D
Sbjct: 372 FVLRYPVFVEAHETLKSCSVSYALLKQVNPHMEIESISKGEVVDVSTGSNTV-PPNVDNE 430
Query: 918 IIINLLAMRNFVAIEHILSESLHRNLLLDSNIISAVVHANYATHRSTGALTAFEYCIKMR 1097
++ LL A++H+L + +N+ LDS+II +++ N ++R AL AF+YC+K
Sbjct: 431 LLAMLLKDNKLTAVDHMLIGIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNS 490
Query: 1098 QILDKSAYXXXXXXXXXXXXYQKVLEIVEEMVRANICLGTYLVSLLIYKLGCSGFPAFSE 1277
+ + Y Y K+LEIV+EM CLG Y +L++Y LG +G P ++
Sbjct: 491 VNIKRKLYLDLIGILIRSSIYPKLLEIVQEMYTQGHCLGLYHATLILYSLGKAGKPQYAR 550
Query: 1278 KLYYLCSTD-QNTATCTALISAYLQAGEVEKGLDVYSRMRNEGIPFSVGTYAALIVGLEK 1454
K++ + + + TAT TAL+ Y AG KGL ++ MR +G S+GTY L+ GL K
Sbjct: 551 KVFNMLPEELKCTATYTALVDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAK 610
Query: 1455 AGRPRDAEVYRKEKKRLEWCYHSR-GTALLEESLCDCLF 1568
GR + +YR+EKK E +HSR T L +E +CD LF
Sbjct: 611 NGRGVELNIYRREKKSFEISHHSRLNTILDDERICDLLF 649
>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
[Cucumis sativus]
Length = 1058
Score = 510 bits (1314), Expect = e-142
Identities = 257/519 (49%), Positives = 343/519 (66%), Gaps = 3/519 (0%)
Frame = +3
Query: 21 PPVYMRTTISSISNLLRYSPWSSAQSQLHLLPIRWDSFTINQVLKTHPPMEKSWLFFNWA 200
P +Y R T+ +I N+LR W+SAQ L +LPIRWDS+ INQVLKTHPP+EK+WLFFNWA
Sbjct: 113 PRLYTRDTVRNICNILRNCSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEKTWLFFNWA 172
Query: 201 SKLPSFKHDHFTYTTMLDIFGEAGRIQSMLRVFQDMEEKGIAADAATYTSLMHWMGKAGD 380
S L FKHD +TYTTMLDIFGEAGRI SM VFQ M+EKGI DA TYTSLMHW +GD
Sbjct: 173 STLQVFKHDQYTYTTMLDIFGEAGRISSMNYVFQQMKEKGIKIDAVTYTSLMHWRSNSGD 232
Query: 381 FDGAIKAWEEMRSRGCRPTIVSYTAFIKVLFDHGRPREAARVYKEMLEVGLTPNCQTYTV 560
DGAIK W+EM++ GC PT+VSYTA+IK+L D+G+ EA YK+ML+ GL+PNC YT+
Sbjct: 233 VDGAIKLWKEMKANGCHPTVVSYTAYIKILLDNGQINEATATYKKMLQSGLSPNCCIYTI 292
Query: 561 LMEYLAGEGKFDAVLEVMNKMQEVGIHPDKAMCNILVQKCSKAGETSVMAQILQFMKENF 740
LMEYL GEGK L++ +KMQ+ G++PDKA CNIL+QKC K+GE VM QIL+FMKEN
Sbjct: 293 LMEYLIGEGKCKEALDIFSKMQDAGVYPDKAACNILIQKCCKSGERLVMTQILEFMKENR 352
Query: 741 IVLRRPVFLEALEALKISGESDHLLREVNPHLSCEGMVE-EITDSEAAATDISSEKIDRG 917
VLR PVF+EA E LK S LL++VNPH+ E + + E+ D + + +D
Sbjct: 353 FVLRYPVFVEAHETLKSCSVSYALLKQVNPHMEIESISKGEVVDVSTGSNTV-PPNVDNE 411
Query: 918 IIINLLAMRNFVAIEHILSESLHRNLLLDSNIISAVVHANYATHRSTGALTAFEYCIKMR 1097
++ LL A++H+L + +N+ LDS+II +++ N ++R AL AF+YC+K
Sbjct: 412 LLAMLLKDNKLTAVDHMLIGIVDKNIQLDSSIIYSIIEVNCKSNRPNSALLAFDYCLKNS 471
Query: 1098 QILDKSAYXXXXXXXXXXXXYQKVLEIVEEMVRANICLGTYLVSLLIYKLGCSGFPAFSE 1277
+ + Y Y K+LEIV+EM CLG Y +L++ LG +G P ++
Sbjct: 472 VNIKRKLYLDLIGILIRSSIYPKLLEIVQEMYTQGHCLGLYHATLILCSLGKAGKPQYAR 531
Query: 1278 KLYYLCSTD-QNTATCTALISAYLQAGEVEKGLDVYSRMRNEGIPFSVGTYAALIVGLEK 1454
K++ + + + TAT TAL+ Y AG KGL ++ MR +G S+GTY L+ GL K
Sbjct: 532 KVFNMLPEELKCTATYTALVDGYFSAGSSGKGLKIFETMRKKGFTPSLGTYNVLLNGLAK 591
Query: 1455 AGRPRDAEVYRKEKKRLEWCYHSR-GTALLEESLCDCLF 1568
GR + +YR+EKK E +HSR T L +E +CD LF
Sbjct: 592 NGRGVELNIYRREKKSFEISHHSRLNTILDDERICDLLF 630
>ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525131|gb|AET05585.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 687
Score = 498 bits (1283), Expect = e-138
Identities = 258/526 (49%), Positives = 337/526 (64%), Gaps = 2/526 (0%)
Frame = +3
Query: 15 PSPPVYMRTTISSISNLLRYSPWSSAQSQLHLLPIRWDSFTINQVLKTHPPMEKSWLFFN 194
PS YMR I +I L+YS W SAQ QL LP++WDS+T+NQVLK+HPPMEK+WLFFN
Sbjct: 162 PSSREYMRNVIGNIYRTLKYSSWDSAQQQLQNLPLKWDSYTVNQVLKSHPPMEKAWLFFN 221
Query: 195 WASKLPSFKHDHFTYTTMLDIFGEAGRIQSMLRVFQDMEEKGIAADAATYTSLMHWMGKA 374
WAS+L FKHD FTYTTMLDIFGEAGRI SM VF M EKGI D+ TYTS+MHW+ +
Sbjct: 222 WASRLKGFKHDQFTYTTMLDIFGEAGRISSMKHVFNQMHEKGIKIDSVTYTSMMHWLSTS 281
Query: 375 GDFDGAIKAWEEMRSRGC-RPTIVSYTAFIKVLFDHGRPREAARVYKEMLEVGLTPNCQT 551
G+ D AI W+EM+S+GC PT+VSYTAFIK+LFD+ R +EA +YKEML G PNC T
Sbjct: 282 GNVDEAIALWDEMKSKGCCYPTVVSYTAFIKILFDNHRVKEATAIYKEMLHNGCVPNCYT 341
Query: 552 YTVLMEYLAGEGKFDAVLEVMNKMQEVGIHPDKAMCNILVQKCSKAGETSVMAQILQFMK 731
YTVLM++L GK LE+ KMQE G+ PDKA CNIL+ KCSK T M +ILQ+MK
Sbjct: 342 YTVLMDHLIASGKCKEALEIFQKMQEAGVEPDKAACNILIDKCSKVCGTVFMTKILQYMK 401
Query: 732 ENFIVLRRPVFLEALEALKISGESDHLLREVNPHLSCEGMVEEITDSEAAATDISSEKID 911
EN +VLR V+++A+EALKI+GESD LLR+VNPH + +E SS ID
Sbjct: 402 ENRLVLRYRVYVKAMEALKIAGESDTLLRQVNPHFYLDSSFKEKAHDRNTVIADSSSNID 461
Query: 912 RGIIINLLAMRNFVAIEHILSESLHRNLLLDSNIISAVVHANYATHRSTGALTAFEYCIK 1091
+ +++ LL RN VAI+H++ + + + +D+ +IS ++ N R GAL AF Y +
Sbjct: 462 KELLLVLLRNRNVVAIDHLIQGMMDKKISVDNKVISTIIEVNCNCCRPDGALLAFNYSVT 521
Query: 1092 MRQILDKSAYXXXXXXXXXXXXYQKVLEIVEEMVRANICLGTYLVSLLIYKLGCSGFPAF 1271
M ++++ Y + K++EIV EM RA LG YL SLLIY+LGC+ +
Sbjct: 522 MGISIERTGYLSLVGLLNRSNMFSKLVEIVGEMTRAGHSLGIYLASLLIYRLGCARQLSI 581
Query: 1272 SEKLYYLCSTDQN-TATCTALISAYLQAGEVEKGLDVYSRMRNEGIPFSVGTYAALIVGL 1448
+ K++ L + AT TALIS Y A V K L++Y M +G + GT+ L+ GL
Sbjct: 582 ALKIFNLLPDNHKCVATYTALISIYFSARRVNKALEIYKIMCQKGNCPTSGTFNILVAGL 641
Query: 1449 EKAGRPRDAEVYRKEKKRLEWCYHSRGTALLEESLCDCLFDGGYFL 1586
E+ GR +A V+RK KK L S+ E +CD LF G L
Sbjct: 642 ERNGRFSEAGVHRKAKKNLNSNIGSQENLSTEGRICDLLFAGDVIL 687