BLASTX nr result

ID: Dioscorea21_contig00021539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021539
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40444.1| unknown [Lotus japonicus]                              183   1e-44
ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Gly...   183   1e-44
gb|AFK46232.1| unknown [Medicago truncatula]                          182   3e-44
ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula...   181   4e-44
ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cuc...   179   2e-43

>gb|AFK40444.1| unknown [Lotus japonicus]
          Length = 124

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/121 (69%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
 Frame = +1

Query: 169 MEPEVVDSEMALPAVLPFKRIQMSDKYPKAQSRGRHWKHLKQILQAENF---PENEPNYL 339
           ME EVVD+E+ LP  L FKR+QM +KYPK QSRGRHWKHLKQI+QAEN+   P ++PNY+
Sbjct: 1   MEAEVVDAELVLPNYLSFKRVQMHEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDQPNYV 60

Query: 340 SIESPPSMYPPKKFCDVTGFKAPYVDPRTSLRYANPDVLKCIRYLPNEYVQRYLSLRNAA 519
           +IESPPSM+P K+ CD+TG++APY DPRT+LRYAN DV K IR LPN+YVQRYL+LRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANTDVFKIIRALPNDYVQRYLALRNAA 120

Query: 520 I 522
           +
Sbjct: 121 V 121


>ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Glycine max]
          Length = 178

 Score =  183 bits (465), Expect = 1e-44
 Identities = 86/121 (71%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
 Frame = +1

Query: 169 MEPEVVDSEMALPAVLPFKRIQMSDKYPKAQSRGRHWKHLKQILQAENF---PENEPNYL 339
           ME EVV++E+ LP+ L FKR+QM +KYPK Q+RGRHWKHLKQI+QAEN+   P +EPNY 
Sbjct: 55  MEAEVVEAELVLPSYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNYPPDEPNYA 114

Query: 340 SIESPPSMYPPKKFCDVTGFKAPYVDPRTSLRYANPDVLKCIRYLPNEYVQRYLSLRNAA 519
           +IESPPSM+P K+ CD+TGF+APY DPRT+LRYAN +V K IR LPNEYVQRYLSLRNAA
Sbjct: 115 NIESPPSMHPCKRICDITGFEAPYHDPRTNLRYANAEVFKIIRSLPNEYVQRYLSLRNAA 174

Query: 520 I 522
           I
Sbjct: 175 I 175


>gb|AFK46232.1| unknown [Medicago truncatula]
          Length = 129

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/126 (67%), Positives = 103/126 (81%), Gaps = 3/126 (2%)
 Frame = +1

Query: 154 LEASVMEPEVVDSEMALPAVLPFKRIQMSDKYPKAQSRGRHWKHLKQILQAENF---PEN 324
           ++   ME EVVD+E+ LP  L FKRIQM DKYPK QSRGRHWKHLKQI+QAEN+   P +
Sbjct: 1   MKVKKMEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPD 60

Query: 325 EPNYLSIESPPSMYPPKKFCDVTGFKAPYVDPRTSLRYANPDVLKCIRYLPNEYVQRYLS 504
           EPNY++IESPPSM+P K+ CD+TG++APY DP+T+LRYAN DV K IR LPNE VQRYL 
Sbjct: 61  EPNYVNIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLG 120

Query: 505 LRNAAI 522
           +RNAA+
Sbjct: 121 MRNAAV 126


>ref|XP_003601484.1| INO80 complex subunit C [Medicago truncatula]
           gi|355490532|gb|AES71735.1| INO80 complex subunit C
           [Medicago truncatula]
          Length = 124

 Score =  181 bits (460), Expect = 4e-44
 Identities = 85/121 (70%), Positives = 101/121 (83%), Gaps = 3/121 (2%)
 Frame = +1

Query: 169 MEPEVVDSEMALPAVLPFKRIQMSDKYPKAQSRGRHWKHLKQILQAENF---PENEPNYL 339
           ME EVVD+E+ LP  L FKRIQM DKYPK QSRGRHWKHLKQI+QAEN+   P +EPNY+
Sbjct: 1   MEAEVVDAELVLPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYV 60

Query: 340 SIESPPSMYPPKKFCDVTGFKAPYVDPRTSLRYANPDVLKCIRYLPNEYVQRYLSLRNAA 519
           +IESPPSM+P K+ CD+TG++APY DP+T+LRYAN DV K IR LPNE VQRYL +RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQRYLGMRNAA 120

Query: 520 I 522
           +
Sbjct: 121 V 121


>ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cucumis sativus]
           gi|449521619|ref|XP_004167827.1| PREDICTED: INO80
           complex subunit C-like [Cucumis sativus]
          Length = 124

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/121 (68%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
 Frame = +1

Query: 169 MEPEVVDSEMALPAVLPFKRIQMSDKYPKAQSRGRHWKHLKQILQAENFPE---NEPNYL 339
           ME EV+++E+ LP  L FKRIQM +KYPK QSRGRHWKHLKQILQAEN+     +EPNY+
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYV 60

Query: 340 SIESPPSMYPPKKFCDVTGFKAPYVDPRTSLRYANPDVLKCIRYLPNEYVQRYLSLRNAA 519
           +IESPPSM+P K+ CD+TG++APY DPRT+LRYAN D+ K IR LPNEYVQRYL++RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 520 I 522
           +
Sbjct: 121 V 121


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