BLASTX nr result

ID: Dioscorea21_contig00021519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021519
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436975.1| hypothetical protein SORBIDRAFT_10g013010 [S...   199   2e-49
gb|ACN33511.1| unknown [Zea mays] gi|413938531|gb|AFW73082.1| hy...   195   5e-48
ref|XP_002307008.1| predicted protein [Populus trichocarpa] gi|2...   195   5e-48
ref|NP_001143123.1| uncharacterized protein LOC100275601 [Zea ma...   192   3e-47
ref|NP_001145321.1| uncharacterized protein LOC100278639 [Zea ma...   190   2e-46

>ref|XP_002436975.1| hypothetical protein SORBIDRAFT_10g013010 [Sorghum bicolor]
           gi|241915198|gb|EER88342.1| hypothetical protein
           SORBIDRAFT_10g013010 [Sorghum bicolor]
          Length = 522

 Score =  199 bits (506), Expect = 2e-49
 Identities = 104/191 (54%), Positives = 130/191 (68%), Gaps = 13/191 (6%)
 Frame = -1

Query: 535 GTSAMVLPCLDMKPFVATLVVITLVMAIWQLQPYESLLSTTRPSASCPTIPSTIANTSNT 356
           G +A+ + C D+K FVA+L ++TLVMA+WQL PY+ LLS +RPS +CP +P    + S+ 
Sbjct: 12  GVAALGVSCFDIKSFVASLALLTLVMALWQLHPYQPLLSASRPSTTCPLLPRPPISASSR 71

Query: 355 NLITPLPMQKISSSSLASKDNTT------ISTTK--RSITPRQDPPQDPNKRVFRPYGSA 200
              T  P    +SS+ A+           ++TTK   S+ P   P +DPNKR FR YGSA
Sbjct: 72  AAATVAPFPSGNSSANAASTKAASSAVPAVTTTKPAASVVPAARP-RDPNKREFRSYGSA 130

Query: 199 AALFVQMGAYRGGPATFAIVGLASKPIHVFGKPWFKCEWVSN-DKSRP----NVRAKAYK 35
           AALFVQMGAYRGGP TFA++GLASKP HV+G P+FKCEWV N D S P     VR KAYK
Sbjct: 131 AALFVQMGAYRGGPRTFAVIGLASKPAHVYGTPYFKCEWVPNQDPSSPAPPRAVRTKAYK 190

Query: 34  MLPDWGYGRVY 2
           MLPDWGYGR+Y
Sbjct: 191 MLPDWGYGRIY 201


>gb|ACN33511.1| unknown [Zea mays] gi|413938531|gb|AFW73082.1| hypothetical protein
           ZEAMMB73_523261 [Zea mays]
          Length = 523

 Score =  195 bits (495), Expect = 5e-48
 Identities = 105/191 (54%), Positives = 126/191 (65%), Gaps = 13/191 (6%)
 Frame = -1

Query: 535 GTSAMVLPCLDMKPFVATLVVITLVMAIWQLQPYESLLSTTRPSAS--CPTIPSTIA--- 371
           G +   +PC+D+K FVA+L  +TL +  WQLQPY S+L+  R SAS  C  +P+T A   
Sbjct: 14  GGAPFAIPCVDIKSFVASLAFLTLFVVFWQLQPYGSVLTAARTSASPPCTLLPTTAAIDL 73

Query: 370 ----NTSNTNLITPLPMQKISSSSLASKDNTTISTTKRSITPRQDPPQDPNKRVFRPYGS 203
                TS+T   T  P    + S+ A+  N       ++  P +  P+DPNKRVFRPYGS
Sbjct: 74  ASPDTTSSTAAKTDQPAAAAAVSATAAGANAAPVWLAKAARPAR--PEDPNKRVFRPYGS 131

Query: 202 AAALFVQMGAYRGGPATFAIVGLASKPIHVFGKPWFKCEWVSN----DKSRPNVRAKAYK 35
           AAALFVQMGAYRGGP TFAIVGLASKP HVFG P+FKCEW+ N    D S   VR KAYK
Sbjct: 132 AAALFVQMGAYRGGPRTFAIVGLASKPTHVFGTPYFKCEWLPNPTAGDPSPRPVRTKAYK 191

Query: 34  MLPDWGYGRVY 2
           MLPDWGYGRVY
Sbjct: 192 MLPDWGYGRVY 202


>ref|XP_002307008.1| predicted protein [Populus trichocarpa] gi|222856457|gb|EEE94004.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  195 bits (495), Expect = 5e-48
 Identities = 105/182 (57%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
 Frame = -1

Query: 538 SGTSAMVLP-CLDMKPFVATLVVITLVMAIWQLQPY-ESLLSTT-RPSASCPTIPSTIAN 368
           SG +   LP C + KP VATL+ +TLVM +W L PY ++LLSTT RPS S P    +I+N
Sbjct: 10  SGATVSKLPACFETKPLVATLLALTLVMLLWNLPPYYQNLLSTTTRPSCSAPETTVSISN 69

Query: 367 TSNTNLITPLPMQKISSSSLASKDNTTISTTKRSITPRQDPPQDPNKRVFRPYGSAAALF 188
           TS++   T L  QK  SSS +S  N                  DPNKR+F+ YG+AAALF
Sbjct: 70  TSSSFTSTSLSDQKYLSSSSSSSSNA-----------------DPNKRIFQAYGNAAALF 112

Query: 187 VQMGAYRGGPATFAIVGLASKPIHVFGKPWFKCEWVSNDKSRPNVRAKAYKMLPDWGYGR 8
           VQMGAYRGGP TFA+VGLASKPIHVF  PW+KCEW+SN+ S  ++RAKAYKMLPDWGYGR
Sbjct: 113 VQMGAYRGGPTTFAVVGLASKPIHVFRLPWYKCEWISNNGS--SIRAKAYKMLPDWGYGR 170

Query: 7   VY 2
           VY
Sbjct: 171 VY 172


>ref|NP_001143123.1| uncharacterized protein LOC100275601 [Zea mays]
           gi|195614678|gb|ACG29169.1| hypothetical protein [Zea
           mays] gi|413944413|gb|AFW77062.1| hypothetical protein
           ZEAMMB73_000862 [Zea mays]
          Length = 522

 Score =  192 bits (488), Expect = 3e-47
 Identities = 102/191 (53%), Positives = 127/191 (66%), Gaps = 13/191 (6%)
 Frame = -1

Query: 535 GTSAMVLPCLDMKPFVATLVVITLVMAIWQLQPYESLLSTTRPSASCPTIPSTIANTSNT 356
           G +A  + C D+K FVA+L ++TLVMA+WQL PY+ LLS +RPS+ CP +P    + S+ 
Sbjct: 12  GVTAFGVSCFDIKSFVASLALLTLVMALWQLHPYQPLLSASRPSSICPLLPRPTISASSR 71

Query: 355 NLITPLPMQKISSSS------LASKDNTTISTTK--RSITPRQDPPQDPNKRVFRPYGSA 200
              T       +SS+       AS     ++TTK   S+ P   P +DPNKR FR YGSA
Sbjct: 72  AASTAAAFPSANSSTNAASTKAASSAAPAVTTTKPAASVLPAARP-RDPNKREFRSYGSA 130

Query: 199 AALFVQMGAYRGGPATFAIVGLASKPIHVFGKPWFKCEWVSN-DKSRP----NVRAKAYK 35
           AALFVQMGAYRGGP TFA++GLASKP HV+  P+FKCEWV N + S P     VR KAYK
Sbjct: 131 AALFVQMGAYRGGPRTFAVIGLASKPAHVYDTPYFKCEWVPNQEPSSPAPPRAVRTKAYK 190

Query: 34  MLPDWGYGRVY 2
           MLPDWGYGR+Y
Sbjct: 191 MLPDWGYGRIY 201


>ref|NP_001145321.1| uncharacterized protein LOC100278639 [Zea mays]
           gi|195654607|gb|ACG46771.1| hypothetical protein [Zea
           mays]
          Length = 525

 Score =  190 bits (482), Expect = 2e-46
 Identities = 101/191 (52%), Positives = 122/191 (63%), Gaps = 13/191 (6%)
 Frame = -1

Query: 535 GTSAMVLPCLDMKPFVATLVVITLVMAIWQLQPYESLLSTTRPSAS--CPTIPSTIA--- 371
           G +   +PC+D+K FV +L  +TL +  WQLQPY S+L+  R SAS  C  +P+T     
Sbjct: 14  GGAPFAVPCVDIKSFVGSLAFLTLFVVFWQLQPYGSVLTAARTSASPPCTLLPTTAVIDL 73

Query: 370 ----NTSNTNLITPLPMQKISSSSLASKDNTTISTTKRSITPRQDPPQDPNKRVFRPYGS 203
                TS+T   T  P    +++  A+      +    +   R   P+DPNKRVFRPYGS
Sbjct: 74  ASPDTTSSTAAKTDQPAAAAAAAVSATAAGANAAPVWLAKAARPARPEDPNKRVFRPYGS 133

Query: 202 AAALFVQMGAYRGGPATFAIVGLASKPIHVFGKPWFKCEWVSN----DKSRPNVRAKAYK 35
           AAALFVQMGAYRGGP TFAIVGLASKP HVFG P+FKCEW+ N    D S   VR KAYK
Sbjct: 134 AAALFVQMGAYRGGPRTFAIVGLASKPTHVFGTPYFKCEWLPNPTAGDPSPRPVRTKAYK 193

Query: 34  MLPDWGYGRVY 2
           MLPDWGYGRVY
Sbjct: 194 MLPDWGYGRVY 204


Top