BLASTX nr result

ID: Dioscorea21_contig00021427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021427
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622361.1| PHD finger protein [Medicago truncatula] gi|...    65   7e-09
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu...    63   2e-08
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...    62   4e-08
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like...    62   6e-08

>ref|XP_003622361.1| PHD finger protein [Medicago truncatula]
           gi|355497376|gb|AES78579.1| PHD finger protein [Medicago
           truncatula]
          Length = 797

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +2

Query: 65  TWRVAFKVGEVVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199
           TW++ F+VGE+ E GE+ PA + L +V EDVARSRSVYCDQCR+ G
Sbjct: 68  TWQILFRVGEITEGGESGPAVICLDVVEEDVARSRSVYCDQCRVFG 113



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300
           VMDVSKK+GLEYRLLHAI+ G PWYG+WGY
Sbjct: 321 VMDVSKKYGLEYRLLHAIMKGNPWYGEWGY 350


>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
           gi|223542200|gb|EEF43744.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 677

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +1

Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300
           VMDVSKK+GLEYRLLHAI+ G+PWYG WGY
Sbjct: 225 VMDVSKKYGLEYRLLHAIIKGHPWYGDWGY 254



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
 Frame = +2

Query: 65  TWRVAFKVGEVVES-GETPATVELVIVVEDVARSRSVYCDQCRIVG 199
           TW+++F+VG++ +    +PA V L IV EDVARSRSVYCDQCR+VG
Sbjct: 62  TWQISFRVGDLTDGLDSSPAVVSLDIVEEDVARSRSVYCDQCRVVG 107


>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
           gi|296084820|emb|CBI27702.3| unnamed protein product
           [Vitis vinifera]
          Length = 692

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 2/47 (4%)
 Frame = +2

Query: 65  TWRVAFKVGE-VVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199
           TW++ F+VGE VV+ GE+ PA V L +V EDVARSRSVYCDQCR+VG
Sbjct: 62  TWQIWFRVGEAVVDGGESSPAVVCLDVVEEDVARSRSVYCDQCRVVG 108



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = +1

Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300
           VMDVSKK GLE+RLLHAI  G+PWYG+WGY
Sbjct: 226 VMDVSKKHGLEFRLLHAITKGHPWYGEWGY 255


>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +2

Query: 65  TWRVAFKVGEVVESG---ETPATVELVIVVEDVARSRSVYCDQCRIVG 199
           TW+++F+VG++VESG      A V L +V EDVARSR+VYCDQCR+VG
Sbjct: 76  TWQISFRVGDLVESGGGEAGSAVVSLDVVEEDVARSRTVYCDQCRVVG 123



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +1

Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300
           VMDVSKK+G+EYRLLHAI  G+ WYG WGY
Sbjct: 241 VMDVSKKYGIEYRLLHAITKGHSWYGDWGY 270


>ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
          Length = 668

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +1

Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300
           VMDVSKK+G+EYRLLHAI  G+PWYG+WGY
Sbjct: 204 VMDVSKKYGVEYRLLHAITKGHPWYGEWGY 233



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +2

Query: 65  TWRVAFKVGEVVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199
           TW++ F+VG++V   ++ PA V L IV EDV RSRSVYCDQCR+VG
Sbjct: 41  TWQILFRVGDLVHGPDSQPAVVYLDIVEEDVPRSRSVYCDQCRVVG 86


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