BLASTX nr result
ID: Dioscorea21_contig00021427
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021427 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003622361.1| PHD finger protein [Medicago truncatula] gi|... 65 7e-09 ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu... 63 2e-08 ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit... 62 4e-08 ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2... 62 5e-08 ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like... 62 6e-08 >ref|XP_003622361.1| PHD finger protein [Medicago truncatula] gi|355497376|gb|AES78579.1| PHD finger protein [Medicago truncatula] Length = 797 Score = 64.7 bits (156), Expect = 7e-09 Identities = 29/46 (63%), Positives = 37/46 (80%), Gaps = 1/46 (2%) Frame = +2 Query: 65 TWRVAFKVGEVVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199 TW++ F+VGE+ E GE+ PA + L +V EDVARSRSVYCDQCR+ G Sbjct: 68 TWQILFRVGEITEGGESGPAVICLDVVEEDVARSRSVYCDQCRVFG 113 Score = 61.6 bits (148), Expect = 6e-08 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = +1 Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300 VMDVSKK+GLEYRLLHAI+ G PWYG+WGY Sbjct: 321 VMDVSKKYGLEYRLLHAIMKGNPWYGEWGY 350 >ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis] gi|223542200|gb|EEF43744.1| DNA binding protein, putative [Ricinus communis] Length = 677 Score = 63.2 bits (152), Expect = 2e-08 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = +1 Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300 VMDVSKK+GLEYRLLHAI+ G+PWYG WGY Sbjct: 225 VMDVSKKYGLEYRLLHAIIKGHPWYGDWGY 254 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%) Frame = +2 Query: 65 TWRVAFKVGEVVES-GETPATVELVIVVEDVARSRSVYCDQCRIVG 199 TW+++F+VG++ + +PA V L IV EDVARSRSVYCDQCR+VG Sbjct: 62 TWQISFRVGDLTDGLDSSPAVVSLDIVEEDVARSRSVYCDQCRVVG 107 >ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera] gi|296084820|emb|CBI27702.3| unnamed protein product [Vitis vinifera] Length = 692 Score = 62.4 bits (150), Expect = 4e-08 Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 2/47 (4%) Frame = +2 Query: 65 TWRVAFKVGE-VVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199 TW++ F+VGE VV+ GE+ PA V L +V EDVARSRSVYCDQCR+VG Sbjct: 62 TWQIWFRVGEAVVDGGESSPAVVCLDVVEEDVARSRSVYCDQCRVVG 108 Score = 59.7 bits (143), Expect = 2e-07 Identities = 24/30 (80%), Positives = 27/30 (90%) Frame = +1 Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300 VMDVSKK GLE+RLLHAI G+PWYG+WGY Sbjct: 226 VMDVSKKHGLEFRLLHAITKGHPWYGEWGY 255 >ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1| predicted protein [Populus trichocarpa] Length = 688 Score = 62.0 bits (149), Expect = 5e-08 Identities = 29/48 (60%), Positives = 38/48 (79%), Gaps = 3/48 (6%) Frame = +2 Query: 65 TWRVAFKVGEVVESG---ETPATVELVIVVEDVARSRSVYCDQCRIVG 199 TW+++F+VG++VESG A V L +V EDVARSR+VYCDQCR+VG Sbjct: 76 TWQISFRVGDLVESGGGEAGSAVVSLDVVEEDVARSRTVYCDQCRVVG 123 Score = 58.2 bits (139), Expect = 7e-07 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = +1 Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300 VMDVSKK+G+EYRLLHAI G+ WYG WGY Sbjct: 241 VMDVSKKYGIEYRLLHAITKGHSWYGDWGY 270 >ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus] Length = 668 Score = 61.6 bits (148), Expect = 6e-08 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = +1 Query: 211 VMDVSKKFGLEYRLLHAIVSGYPWYGKWGY 300 VMDVSKK+G+EYRLLHAI G+PWYG+WGY Sbjct: 204 VMDVSKKYGVEYRLLHAITKGHPWYGEWGY 233 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%) Frame = +2 Query: 65 TWRVAFKVGEVVESGET-PATVELVIVVEDVARSRSVYCDQCRIVG 199 TW++ F+VG++V ++ PA V L IV EDV RSRSVYCDQCR+VG Sbjct: 41 TWQILFRVGDLVHGPDSQPAVVYLDIVEEDVPRSRSVYCDQCRVVG 86