BLASTX nr result

ID: Dioscorea21_contig00021401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021401
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...   242   2e-62
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...   241   5e-62
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   239   2e-61
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   234   4e-60
emb|CBI23992.3| unnamed protein product [Vitis vinifera]              234   4e-60

>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 961

 Score =  242 bits (618), Expect = 2e-62
 Identities = 110/168 (65%), Positives = 135/168 (80%)
 Frame = -1

Query: 505 GYCIDLFEDVVKRLPYAIFYEFIPFENEHGGPAGTYNDLVYQVYLQKFDAVVGDVTITAN 326
           GYCID+F+ VVK LPY + YE+IPF N  G  AGTY+DLVYQVY  KFDAVVGD TI AN
Sbjct: 491 GYCIDVFDAVVKALPYTVTYEYIPFANPDGSSAGTYDDLVYQVYTGKFDAVVGDTTIIAN 550

Query: 325 RSLHVDFTLPFTEPGVSLLVPVRESTHKNAWIFLKPLSVDLWLGSLAFFFYTGFVIWVME 146
           RSL+VDFT P+TE GVS++VP++++  KNAW+FLKPL+ DLW+ S  FF + GFV+WV+E
Sbjct: 551 RSLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFLKPLTWDLWVTSFCFFVFIGFVVWVLE 610

Query: 145 HRINTDFRGPPSQQLGTMFCFSLSTLVFAHREKVENILSKLVLIIWLF 2
           HRIN DFRGPPS Q GT F FS ST+VFAHRE+V + L++ V+IIW F
Sbjct: 611 HRINQDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARSVVIIWCF 658


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score =  241 bits (615), Expect = 5e-62
 Identities = 109/168 (64%), Positives = 136/168 (80%)
 Frame = -1

Query: 505 GYCIDLFEDVVKRLPYAIFYEFIPFENEHGGPAGTYNDLVYQVYLQKFDAVVGDVTITAN 326
           GYCID+F+ VVK LPYA+ YE+ PF N  G  AGTY+DLVYQVY  +FDAVVGD TI AN
Sbjct: 467 GYCIDVFDAVVKALPYAVTYEYTPFVNPDGSSAGTYDDLVYQVYTGEFDAVVGDTTIIAN 526

Query: 325 RSLHVDFTLPFTEPGVSLLVPVRESTHKNAWIFLKPLSVDLWLGSLAFFFYTGFVIWVME 146
           RSL+VDFT P+TE GVS++VP++++  KNAW+F+KPL+ DLW+ S  FF + GFV+WV+E
Sbjct: 527 RSLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFVKPLTWDLWVTSFCFFVFIGFVVWVLE 586

Query: 145 HRINTDFRGPPSQQLGTMFCFSLSTLVFAHREKVENILSKLVLIIWLF 2
           HRIN DFRGPPS Q GT F FS ST+VFAHRE+V + L++LV+IIW F
Sbjct: 587 HRINEDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARLVVIIWCF 634


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 856

 Score =  239 bits (609), Expect = 2e-61
 Identities = 110/168 (65%), Positives = 135/168 (80%)
 Frame = -1

Query: 505 GYCIDLFEDVVKRLPYAIFYEFIPFENEHGGPAGTYNDLVYQVYLQKFDAVVGDVTITAN 326
           GY ID+FE VV  LPYA+ YE+IPF N  GG AG Y+ LVYQVYLQK+DAVVGD TI  N
Sbjct: 492 GYSIDVFEAVVGSLPYALPYEYIPFANPDGGTAGNYDSLVYQVYLQKYDAVVGDTTIVFN 551

Query: 325 RSLHVDFTLPFTEPGVSLLVPVRESTHKNAWIFLKPLSVDLWLGSLAFFFYTGFVIWVME 146
           RSL+VDFTLP+TE GVS++VP+ E+ +KNAW+FL+PL+ DLW+ S  FF + GFV+WV+E
Sbjct: 552 RSLYVDFTLPYTESGVSMIVPIIENNNKNAWVFLRPLTWDLWVTSFCFFIFIGFVVWVLE 611

Query: 145 HRINTDFRGPPSQQLGTMFCFSLSTLVFAHREKVENILSKLVLIIWLF 2
           HRIN DFRGPPS  +GT F FS ST++FA RE+V N LS++VLIIW F
Sbjct: 612 HRINEDFRGPPSHHIGTSFWFSFSTMIFAQRERVVNNLSRVVLIIWCF 659


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  234 bits (598), Expect = 4e-60
 Identities = 105/168 (62%), Positives = 137/168 (81%)
 Frame = -1

Query: 505 GYCIDLFEDVVKRLPYAIFYEFIPFENEHGGPAGTYNDLVYQVYLQKFDAVVGDVTITAN 326
           GYCID+F+ V+  LPYA+ YE+IPF    G PAG YNDL+YQV+L+K+DAVVGD TI AN
Sbjct: 492 GYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKPAGNYNDLIYQVFLKKYDAVVGDTTIVAN 551

Query: 325 RSLHVDFTLPFTEPGVSLLVPVRESTHKNAWIFLKPLSVDLWLGSLAFFFYTGFVIWVME 146
           RS +VDFTLP+TE GVS++VP++++  K+AWIFLKPL+ DLW+ S  FF + GFVIWV+E
Sbjct: 552 RSNYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWDLWVTSACFFVFIGFVIWVLE 611

Query: 145 HRINTDFRGPPSQQLGTMFCFSLSTLVFAHREKVENILSKLVLIIWLF 2
           HRIN DFRGPPS Q+GT+F FS ST+VFA +E++ + L++ V+IIW F
Sbjct: 612 HRINEDFRGPPSHQVGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFF 659


>emb|CBI23992.3| unnamed protein product [Vitis vinifera]
          Length = 990

 Score =  234 bits (598), Expect = 4e-60
 Identities = 105/168 (62%), Positives = 137/168 (81%)
 Frame = -1

Query: 505 GYCIDLFEDVVKRLPYAIFYEFIPFENEHGGPAGTYNDLVYQVYLQKFDAVVGDVTITAN 326
           GYCID+F+ V+  LPYA+ YE+IPF    G PAG YNDL+YQV+L+K+DAVVGD TI AN
Sbjct: 492 GYCIDVFDAVMGSLPYAVPYEYIPFGTPDGKPAGNYNDLIYQVFLKKYDAVVGDTTIVAN 551

Query: 325 RSLHVDFTLPFTEPGVSLLVPVRESTHKNAWIFLKPLSVDLWLGSLAFFFYTGFVIWVME 146
           RS +VDFTLP+TE GVS++VP++++  K+AWIFLKPL+ DLW+ S  FF + GFVIWV+E
Sbjct: 552 RSNYVDFTLPYTESGVSMIVPIKDNKSKSAWIFLKPLTWDLWVTSACFFVFIGFVIWVLE 611

Query: 145 HRINTDFRGPPSQQLGTMFCFSLSTLVFAHREKVENILSKLVLIIWLF 2
           HRIN DFRGPPS Q+GT+F FS ST+VFA +E++ + L++ V+IIW F
Sbjct: 612 HRINEDFRGPPSHQVGTIFWFSFSTMVFAQKERIVSNLARFVMIIWFF 659


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