BLASTX nr result

ID: Dioscorea21_contig00021400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021400
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...   319   4e-85
ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...   317   1e-84
ref|XP_002324363.1| glutamate-gated kainate-type ion channel rec...   310   1e-82
ref|XP_002324361.1| glutamate-gated kainate-type ion channel rec...   310   2e-82
ref|XP_002324371.1| glutamate-gated kainate-type ion channel rec...   309   4e-82

>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 931

 Score =  319 bits (817), Expect = 4e-85
 Identities = 144/228 (63%), Positives = 185/228 (81%)
 Frame = +2

Query: 20   SSINGDLSPVIWPGESTKVPKGWDIPVTGKKLRIGVPLRDGFHDFVKVEIDNVTNAVKVT 199
            S+   +L+PVIWPG+S+ VPKGW+IP  GKKLRI VP+++GF++FVKV  D  TN   V 
Sbjct: 407  STSESNLAPVIWPGDSSSVPKGWEIPTKGKKLRILVPVKEGFNEFVKVTRDPSTNTTTVR 466

Query: 200  GFCIDVFEAVVKRLPYAISHEYIPFVDEHGQSAGTYNDLVYQVYLQKYDAAVGDITIRAN 379
            G+CIDVF+AVVK LPYA+++EY PFV+  G SAGTY+DLVYQVY  ++DA VGD TI AN
Sbjct: 467  GYCIDVFDAVVKALPYAVTYEYTPFVNPDGSSAGTYDDLVYQVYTGEFDAVVGDTTIIAN 526

Query: 380  RSLYVDFTLPYTESGVAMLVPVKESNHRNGWIFLKPLTVDLWLGTMAFFFYTGFVIWAME 559
            RSLYVDFT PYTESGV+M+VP+K++N +N W+F+KPLT DLW+ +  FF + GFV+W +E
Sbjct: 527  RSLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFVKPLTWDLWVTSFCFFVFIGFVVWVLE 586

Query: 560  HRINTEFRGPPSQQLGTMIYFSFSTLVFAHREKVENILSKLVLIIWLF 703
            HRIN +FRGPPS Q GT  +FSFST+VFAHRE+V + L++LV+IIW F
Sbjct: 587  HRINEDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARLVVIIWCF 634


>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 961

 Score =  317 bits (812), Expect = 1e-84
 Identities = 144/228 (63%), Positives = 182/228 (79%)
 Frame = +2

Query: 20   SSINGDLSPVIWPGESTKVPKGWDIPVTGKKLRIGVPLRDGFHDFVKVEIDNVTNAVKVT 199
            S+   +L+PVIWPG+S+ VPKGW+IP  GKKLRI VP+++GF +FVKV  D  TN   V 
Sbjct: 431  STSESNLAPVIWPGDSSSVPKGWEIPTKGKKLRILVPVKEGFSEFVKVTRDPSTNITTVR 490

Query: 200  GFCIDVFEAVVKRLPYAISHEYIPFVDEHGQSAGTYNDLVYQVYLQKYDAAVGDITIRAN 379
            G+CIDVF+AVVK LPY +++EYIPF +  G SAGTY+DLVYQVY  K+DA VGD TI AN
Sbjct: 491  GYCIDVFDAVVKALPYTVTYEYIPFANPDGSSAGTYDDLVYQVYTGKFDAVVGDTTIIAN 550

Query: 380  RSLYVDFTLPYTESGVAMLVPVKESNHRNGWIFLKPLTVDLWLGTMAFFFYTGFVIWAME 559
            RSLYVDFT PYTESGV+M+VP+K++N +N W+FLKPLT DLW+ +  FF + GFV+W +E
Sbjct: 551  RSLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFLKPLTWDLWVTSFCFFVFIGFVVWVLE 610

Query: 560  HRINTEFRGPPSQQLGTMIYFSFSTLVFAHREKVENILSKLVLIIWLF 703
            HRIN +FRGPPS Q GT  +FSFST+VFAHRE+V + L++ V+IIW F
Sbjct: 611  HRINQDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARSVVIIWCF 658


>ref|XP_002324363.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865797|gb|EEF02928.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 867

 Score =  310 bits (795), Expect = 1e-82
 Identities = 143/228 (62%), Positives = 178/228 (78%)
 Frame = +2

Query: 20   SSINGDLSPVIWPGESTKVPKGWDIPVTGKKLRIGVPLRDGFHDFVKVEIDNVTNAVKVT 199
            S  N DLS VIWPG++T VPKGW+IP  GKKLRIGVP++DGF +FVKV+ D  +N   VT
Sbjct: 401  SGSNSDLSTVIWPGDTTSVPKGWEIPTNGKKLRIGVPVKDGFSEFVKVKRDPSSNTKTVT 460

Query: 200  GFCIDVFEAVVKRLPYAISHEYIPFVDEHGQSAGTYNDLVYQVYLQKYDAAVGDITIRAN 379
            G+ IDVF++VVK LPYA+ +EYIPF    G+ AGTYNDL+YQVYL+ +DA VGD TI  N
Sbjct: 461  GYSIDVFDSVVKALPYALPYEYIPFAKPDGEPAGTYNDLIYQVYLKNFDAVVGDTTIVFN 520

Query: 380  RSLYVDFTLPYTESGVAMLVPVKESNHRNGWIFLKPLTVDLWLGTMAFFFYTGFVIWAME 559
            RS YVDFTLPYTESGV+M+VP+ ++N +N W+FL+PLT DLW+ +  FF + GFVIW +E
Sbjct: 521  RSQYVDFTLPYTESGVSMIVPIVDNNSKNAWVFLRPLTWDLWVTSFCFFIFIGFVIWVLE 580

Query: 560  HRINTEFRGPPSQQLGTMIYFSFSTLVFAHREKVENILSKLVLIIWLF 703
            HRIN +FRGP S Q GT  +FSFST+VFA RE V + LS+ V+IIW F
Sbjct: 581  HRINEDFRGPASHQAGTSFWFSFSTMVFAQRETVVSNLSRAVVIIWCF 628


>ref|XP_002324361.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865795|gb|EEF02926.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 856

 Score =  310 bits (794), Expect = 2e-82
 Identities = 142/228 (62%), Positives = 178/228 (78%)
 Frame = +2

Query: 20   SSINGDLSPVIWPGESTKVPKGWDIPVTGKKLRIGVPLRDGFHDFVKVEIDNVTNAVKVT 199
            SS   D+S VIWPG++T  PKGW+IP  GKKL+IGVP++DGF  FV V  D ++N   V 
Sbjct: 432  SSSVSDISTVIWPGDNTAAPKGWEIPSNGKKLKIGVPVKDGFSQFVSVTRDPISNTTTVK 491

Query: 200  GFCIDVFEAVVKRLPYAISHEYIPFVDEHGQSAGTYNDLVYQVYLQKYDAAVGDITIRAN 379
            G+ IDVFEAVV  LPYA+ +EYIPF +  G +AG Y+ LVYQVYLQKYDA VGD TI  N
Sbjct: 492  GYSIDVFEAVVGSLPYALPYEYIPFANPDGGTAGNYDSLVYQVYLQKYDAVVGDTTIVFN 551

Query: 380  RSLYVDFTLPYTESGVAMLVPVKESNHRNGWIFLKPLTVDLWLGTMAFFFYTGFVIWAME 559
            RSLYVDFTLPYTESGV+M+VP+ E+N++N W+FL+PLT DLW+ +  FF + GFV+W +E
Sbjct: 552  RSLYVDFTLPYTESGVSMIVPIIENNNKNAWVFLRPLTWDLWVTSFCFFIFIGFVVWVLE 611

Query: 560  HRINTEFRGPPSQQLGTMIYFSFSTLVFAHREKVENILSKLVLIIWLF 703
            HRIN +FRGPPS  +GT  +FSFST++FA RE+V N LS++VLIIW F
Sbjct: 612  HRINEDFRGPPSHHIGTSFWFSFSTMIFAQRERVVNNLSRVVLIIWCF 659


>ref|XP_002324371.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865805|gb|EEF02936.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 883

 Score =  309 bits (791), Expect = 4e-82
 Identities = 142/228 (62%), Positives = 178/228 (78%)
 Frame = +2

Query: 20   SSINGDLSPVIWPGESTKVPKGWDIPVTGKKLRIGVPLRDGFHDFVKVEIDNVTNAVKVT 199
            S  N DLS VIWPG++T VPKGW+IP  GKKLRIGVP++DGF +FVKV+ D  +N   VT
Sbjct: 401  SGSNSDLSTVIWPGDTTSVPKGWEIPTNGKKLRIGVPVKDGFSEFVKVKRDPSSNTKTVT 460

Query: 200  GFCIDVFEAVVKRLPYAISHEYIPFVDEHGQSAGTYNDLVYQVYLQKYDAAVGDITIRAN 379
            G+ IDVF++VVK LPYA+ +EYIPF    G+ AGTYNDL+YQVYL+ +DA VGD TI  N
Sbjct: 461  GYSIDVFDSVVKALPYALPYEYIPFAKPDGEPAGTYNDLIYQVYLKNFDAVVGDTTIVFN 520

Query: 380  RSLYVDFTLPYTESGVAMLVPVKESNHRNGWIFLKPLTVDLWLGTMAFFFYTGFVIWAME 559
            RS YVDFTLPYTESGV+M+VP+ ++N +N W+FL+PLT DLW+ +  FF + GFVIW +E
Sbjct: 521  RSQYVDFTLPYTESGVSMIVPIVDNNSKNAWVFLRPLTWDLWVTSFCFFIFIGFVIWVLE 580

Query: 560  HRINTEFRGPPSQQLGTMIYFSFSTLVFAHREKVENILSKLVLIIWLF 703
            HRIN +FRGP S Q GT  +FSFS +VFA RE V + LS++V+IIW F
Sbjct: 581  HRINEDFRGPASHQAGTSFWFSFSIMVFAQRETVVSNLSRVVVIIWCF 628


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