BLASTX nr result

ID: Dioscorea21_contig00021386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021386
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifer...   184   2e-44
ref|XP_002514798.1| conserved hypothetical protein [Ricinus comm...   180   5e-43
ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|2...   177   5e-42
ref|XP_002888405.1| hypothetical protein ARALYDRAFT_894093 [Arab...   166   6e-39
ref|XP_002462123.1| hypothetical protein SORBIDRAFT_02g019530 [S...   165   1e-38

>ref|XP_002267846.2| PREDICTED: ycf20-like protein [Vitis vinifera]
           gi|298205056|emb|CBI38352.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  184 bits (468), Expect = 2e-44
 Identities = 100/171 (58%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
 Frame = -1

Query: 747 HHQVSLWRRTTELHSKPAFLPEMRYQLRRRKWR-AFALDTGEPSNNGGQDELNGDNAGLG 571
           +++ S   + ++L  K A  P   +Q RR  W+ AFALDTG   +NGGQ+ LNG+   LG
Sbjct: 55  NNEPSFSGQISKLGMKSAPFPRKSFQTRRHGWKTAFALDTGGIPDNGGQENLNGNGPDLG 114

Query: 570 RTRLGIIVXXXXXXXXXXXXXXXKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXX 391
           +TRLG IV               KNFPMK+FLLLLGFYTANALATILGQTGDWD      
Sbjct: 115 QTRLGRIVSAGGRQLLAKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAGV 174

Query: 390 XXXAIEGIGMLMYRRTSRIPVGRLQSLVVMVNYWKAGVCLGLFVDAFKLGS 238
              AIEGIGML+Y+++S    GRLQSLVVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 175 VVAAIEGIGMLVYKKSSSQSTGRLQSLVVMINYWKAGVCLGLFVDAFKLGS 225


>ref|XP_002514798.1| conserved hypothetical protein [Ricinus communis]
           gi|223545849|gb|EEF47352.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score =  180 bits (456), Expect = 5e-43
 Identities = 98/164 (59%), Positives = 113/164 (68%), Gaps = 1/164 (0%)
 Frame = -1

Query: 726 RRTTELHSKPAFLPEMRYQLRRRKWRA-FALDTGEPSNNGGQDELNGDNAGLGRTRLGII 550
           R+  ++  K A     R++L  + WR  FALDTG  S NGG++ L+GD++GLG TRLG I
Sbjct: 38  RQIPKIGLKSASFLRKRFKLSGQDWRIPFALDTGGISGNGGEENLDGDSSGLGSTRLGRI 97

Query: 549 VXXXXXXXXXXXXXXXKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXAIEG 370
           V               KNFPMKIFLLLLGFYTANALATILGQTGDWD         AIEG
Sbjct: 98  VSAGGRQLLQKLNSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEG 157

Query: 369 IGMLMYRRTSRIPVGRLQSLVVMVNYWKAGVCLGLFVDAFKLGS 238
           IGMLMY++ +    GRLQS VVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 158 IGMLMYKKPTSPSTGRLQSFVVMMNYWKAGVCLGLFVDAFKLGS 201


>ref|XP_002312200.1| predicted protein [Populus trichocarpa] gi|222852020|gb|EEE89567.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  177 bits (448), Expect = 5e-42
 Identities = 99/156 (63%), Positives = 110/156 (70%), Gaps = 4/156 (2%)
 Frame = -1

Query: 693 FLP--EMRYQLRRRKWR-AFALDTGEPSNNGGQDELNGDNA-GLGRTRLGIIVXXXXXXX 526
           F+P  + R+QLRR+ WR AFALDTG    NGGQ+ +NGD+  GLG TRLG IV       
Sbjct: 58  FVPFQKTRFQLRRQGWRIAFALDTGGLPGNGGQENVNGDSPPGLGGTRLGRIVSAGGRQL 117

Query: 525 XXXXXXXXKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXAIEGIGMLMYRR 346
                   KNFPMKIFLLLLGFYTANALATILGQTGDWD         AIEGIGMLMY++
Sbjct: 118 LEKLNSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKK 177

Query: 345 TSRIPVGRLQSLVVMVNYWKAGVCLGLFVDAFKLGS 238
            S +   RLQ  V M+NYWKAGVCLGLFVDAFKLGS
Sbjct: 178 PSSLSTRRLQYFVAMMNYWKAGVCLGLFVDAFKLGS 213


>ref|XP_002888405.1| hypothetical protein ARALYDRAFT_894093 [Arabidopsis lyrata subsp.
           lyrata] gi|297334246|gb|EFH64664.1| hypothetical protein
           ARALYDRAFT_894093 [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  166 bits (421), Expect = 6e-39
 Identities = 95/155 (61%), Positives = 105/155 (67%), Gaps = 5/155 (3%)
 Frame = -1

Query: 687 PEMRYQLRRRKWR-AFALDTGEP---SNNGGQDELNGDNAGLGRTRLGIIVXXXXXXXXX 520
           P   +QLRRR  + AFALDTG      N GG  E+NGD  GLG TRLG I          
Sbjct: 44  PMKSFQLRRRNRKIAFALDTGSSIPGDNGGGGQEMNGDRTGLGSTRLGRIAVAGGKLLLG 103

Query: 519 XXXXXXKNFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXAIEGIGMLMYRR-T 343
                 KNFPMKIFLLLLGFYTANALATILGQTGDWD         AIEGIGMLMY++ +
Sbjct: 104 KINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPS 163

Query: 342 SRIPVGRLQSLVVMVNYWKAGVCLGLFVDAFKLGS 238
           S +  G+LQS VV +N+WKAGVCLGLFVDAFKLGS
Sbjct: 164 SSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 198


>ref|XP_002462123.1| hypothetical protein SORBIDRAFT_02g019530 [Sorghum bicolor]
           gi|241925500|gb|EER98644.1| hypothetical protein
           SORBIDRAFT_02g019530 [Sorghum bicolor]
          Length = 201

 Score =  165 bits (418), Expect = 1e-38
 Identities = 89/147 (60%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
 Frame = -1

Query: 675 YQLRRRKWR-AFALDTGEPSNNGGQDELNGDNAGLGRTRLGIIVXXXXXXXXXXXXXXXK 499
           YQ++  +WR  FAL+TG PSN  GQD  + D+  LGRTRLG ++                
Sbjct: 56  YQMKNCRWRPTFALETGGPSNTDGQD-FDEDSGFLGRTRLGSLIQAAARELLDKLNSART 114

Query: 498 NFPMKIFLLLLGFYTANALATILGQTGDWDXXXXXXXXXAIEGIGMLMYRRTSRIPVGRL 319
           N P KIFL+LLGFYTANALATILGQTGDWD         AIEGIGMLMYR+    P GR 
Sbjct: 115 NSPTKIFLVLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGMLMYRKPITRPPGRF 174

Query: 318 QSLVVMVNYWKAGVCLGLFVDAFKLGS 238
           QSL+ MVNYWKAGVCLGLFVDAFKLGS
Sbjct: 175 QSLISMVNYWKAGVCLGLFVDAFKLGS 201


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