BLASTX nr result

ID: Dioscorea21_contig00021385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021385
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [S...   152   1e-34
tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea m...   147   5e-33
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-18
ref|XP_002524945.1| pentatricopeptide repeat-containing protein,...    96   2e-17
ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [S...    94   5e-17

>ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [Sorghum bicolor]
           gi|241930143|gb|EES03288.1| hypothetical protein
           SORBIDRAFT_03g028130 [Sorghum bicolor]
          Length = 694

 Score =  152 bits (384), Expect = 1e-34
 Identities = 98/238 (41%), Positives = 134/238 (56%), Gaps = 3/238 (1%)
 Frame = -3

Query: 706 NPFCACALLDLYSKLAPLPHALNLFDRIPQPNLPA-CNSILSALARHALLQDCFQLLDVM 530
           +PF A ALL LYS L PL     LFDRIP+   P   N+++   A+   L + F+L+  M
Sbjct: 85  DPFSASALLHLYSTLGPLHRTRLLFDRIPKSTCPVPWNTMILRYAQDGFLDEAFELMVAM 144

Query: 529 QTWGFDPPGCSSWNSIIAGCVQAGDIELALQVLRLMLNT--VRPSPATFNTLLPVIPDLR 356
           +  G  P G S+WN++IAGCV+AG+ ELA+++L  M++   V P+ ATFNT+L VI  LR
Sbjct: 145 EESGI-PIGASTWNAVIAGCVRAGNGELAIELLGKMVSIGGVVPNVATFNTVLHVISVLR 203

Query: 355 CLETLKMLHGFALRVLEFVDFDPVDEDRLWAAIASGYASLGSLRDASLLFERIRWKSPRL 176
            ++ L+ LH F LR  E V   PVD DRL  ++A+GY     ++ A  +F  +R  +  L
Sbjct: 204 GVDVLRELHAFVLRNAEVVGLGPVDLDRLQESLAAGYMCSSFVQYAGRVFRDVRITTCFL 263

Query: 175 WVSMISGFLDCGAVEEAFEVFRAMAVEFGCEERXXXXXXXXXXXXXXXLRPRNGMEIH 2
              MISGFLD G   +A  VFR MA   G E R               L  + G+EIH
Sbjct: 264 GNLMISGFLDTGQRNQALGVFREMAFGCGYEARHLPSVSLTLVLPEVNLATKRGLEIH 321


>tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea mays]
          Length = 696

 Score =  147 bits (370), Expect = 5e-33
 Identities = 96/238 (40%), Positives = 131/238 (55%), Gaps = 3/238 (1%)
 Frame = -3

Query: 706 NPFCACALLDLYSKLAPLPHALNLFDRIPQPNLPA-CNSILSALARHALLQDCFQLLDVM 530
           +PF A ALL LYS +APL     LFDRIP+   P   N+++   A+   L + F L+  M
Sbjct: 89  DPFSASALLHLYSTIAPLHRTRLLFDRIPKSTYPVPWNTMILRYAQDGFLDEAFDLMVAM 148

Query: 529 QTWGFDPPGCSSWNSIIAGCVQAGDIELALQVLRLMLNT--VRPSPATFNTLLPVIPDLR 356
           +  G  P G S+WN++IAGCV+A + ELA+++L  M++   V PS ATFNT+L VI  LR
Sbjct: 149 EESGI-PIGASTWNAVIAGCVRAENGELAIELLGKMVSVGGVVPSVATFNTVLHVISALR 207

Query: 355 CLETLKMLHGFALRVLEFVDFDPVDEDRLWAAIASGYASLGSLRDASLLFERIRWKSPRL 176
            +  L+ LH F LR  E V   PVD DRL  ++A+GY     ++ A  +F  +R  +  L
Sbjct: 208 GVNVLRELHAFVLRNAEVVGLGPVDLDRLQESLAAGYMCSSCVQYAGRVFRDVRISTCFL 267

Query: 175 WVSMISGFLDCGAVEEAFEVFRAMAVEFGCEERXXXXXXXXXXXXXXXLRPRNGMEIH 2
              MISGFLD G   +A  V R MA   G E +               L  + G+EIH
Sbjct: 268 GNLMISGFLDTGQRNQALGVLREMAFGCGHEAQHLPSASLTLVLPEVNLATKRGLEIH 325


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
 Frame = -3

Query: 907 YNDLIRHHTTSGDHSTALSVFLRMLPLGLRPNEFTFPFVXXXXXXXXXXXXXXXXXXXXX 728
           +N LI  +  +G H  ALS +  M+  G+RP+ FT+P V                     
Sbjct: 110 WNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESIN 169

Query: 727 XXXXXXSNPFCACALLDLYSKLAPLPHALNLFDRIPQPNLPACNSILSALARHALLQDCF 548
                  N +   +L+ +Y K   L  A  LF+++P+ +  + N I+S  A   L ++ F
Sbjct: 170 AAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAF 229

Query: 547 QLLDVMQTWGFDPPGCSSWNSIIAGCVQAGDIELALQVLRLMLNT-VRPSPATFNTLLPV 371
           +L + M+  G +     +WN+I  GCVQ  + + AL++L  M    +   P      L  
Sbjct: 230 ELFEEMRLAGAEV-NIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGA 288

Query: 370 IPDLRCLETLKMLHGFALRVLEFVDFDPVDEDRLWAAIASGYASLGSLRDASLLFERIRW 191
              +  ++   ++H  A+R      FD  D  R   A+ + Y+    LR A +LF+ I+ 
Sbjct: 289 CSHIGAIKLGTVIHASAIRSC----FDGFDNVR--NALITMYSRCKDLRHADILFKSIKT 342

Query: 190 KSPRLWVSMISGFLDCGAVEEAFEVFRAM 104
           KS   W SM+SG+      EEA  +FR M
Sbjct: 343 KSLTTWNSMLSGYTHMDRSEEASFLFREM 371


>ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535780|gb|EEF37442.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 417

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
 Frame = -3

Query: 907 YNDLIRHHTTSGDHSTALSVFLRMLPLGLRPNEFTFPFVXXXXXXXXXXXXXXXXXXXXX 728
           Y  +I  HT    H  AL  + +ML   + PN FTF  +                     
Sbjct: 100 YTSIIHAHTFHKLHYQALLFYAQMLTQKVTPNAFTFSSILKSCPLEFAQIIHAQAIKFGL 159

Query: 727 XXXXXXSNPFCACALLDLYSKLAPLPHALNLFDRIPQPNLPACNSILSALARHALLQDCF 548
                    +    L+D+Y++      A NLFD IP+ +L +  ++++  A+H ++++  
Sbjct: 160 DSDL-----YVRTCLVDVYARGGDFVSARNLFDEIPEKSLVSSTAMITCFAKHGMVKEAR 214

Query: 547 QLLDVMQTWGFDPPGCSSWNSIIAGCVQAGDIELALQVLRLML-NTVRPSPATFNTLLPV 371
            L D     G +      WN +I G VQ G     L + R ML + VRPS  T   +L  
Sbjct: 215 VLFD-----GLEDRDLVCWNVMIDGYVQHGLANEGLVLFRQMLKDRVRPSEVTVLAVLSA 269

Query: 370 IPDLRCLETLKMLHGFALRVLEFVDFDPVDED-RLWAAIASGYASLGSLRDASLLFERIR 194
              +  LE+ + +H +       +  + ++ +  + +A+   Y+  G+L DA L+FERI+
Sbjct: 270 CGQIGALESGRWVHSY-------IQNNGIEINAHVGSALIDMYSKCGNLEDARLVFERIK 322

Query: 193 WKSPRLWVSMISGFLDCGAVEEAFEVFRAM 104
           +K   +W SM++G+   G  ++A ++F  M
Sbjct: 323 YKDVVVWNSMVTGYATHGFSQDALQLFNEM 352


>ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
           gi|241928583|gb|EES01728.1| hypothetical protein
           SORBIDRAFT_03g039300 [Sorghum bicolor]
          Length = 458

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 1/261 (0%)
 Frame = -3

Query: 883 TTSGDHSTALSVFLRMLPLGLRPNEFTFPFVXXXXXXXXXXXXXXXXXXXXXXXXXXXSN 704
           T  G H  AL++F ++L  G+ PNEFTF  V                            N
Sbjct: 17  TRRGRHRDALALFSQVLADGVAPNEFTFGTVLRSATALRAPRAGVQLHACAAKLGLCS-N 75

Query: 703 PFCACALLDLYSKLAPLPHALNLFDRIPQPNLPACNSILSALARHALLQDCFQLLDVMQT 524
            F   ALLD Y+K+  +  A  + D   +PN+ +  ++++ L ++ +  +  +L   M  
Sbjct: 76  VFVGSALLDHYAKMGAMREAHGVLDDTREPNVVSYTALIAGLLKNGMFDEADRLFRRMPE 135

Query: 523 WGFDPPGCSSWNSIIAGCVQAGDIELALQV-LRLMLNTVRPSPATFNTLLPVIPDLRCLE 347
                    SWN++I GC QAG  E A+ + L +    V P+ +TF  +L  + +   L 
Sbjct: 136 -----RNVVSWNAMIGGCSQAGLSEEAVNLFLEMCREGVTPNESTFPCVLTSVANAGALG 190

Query: 346 TLKMLHGFALRVLEFVDFDPVDEDRLWAAIASGYASLGSLRDASLLFERIRWKSPRLWVS 167
             + +H  A++ L  +D        +  ++ S YA  GSL D+ L F+++  K+   W +
Sbjct: 191 VGRSVHASAIKFLGKLDV------YIGNSLVSFYARCGSLEDSVLAFKKMNRKNVVSWNA 244

Query: 166 MISGFLDCGAVEEAFEVFRAM 104
           +I G+   G  EEA + +R M
Sbjct: 245 LICGYAQNGKGEEALDAYRMM 265


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