BLASTX nr result

ID: Dioscorea21_contig00021301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021301
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510054.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
emb|CBI19366.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_003550296.1| PREDICTED: uncharacterized protein LOC100791...    64   1e-08
ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago ...    64   1e-08

>ref|XP_002510054.1| conserved hypothetical protein [Ricinus communis]
           gi|223550755|gb|EEF52241.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
 Frame = +1

Query: 82  NSLGTIPFSWENQPGVSKAM-QEIDNKPKTAPKIKLRPPPCPLDSPK-ATKPSIYIPLPP 255
           N+ G +PFSWE +PGVSK + Q+ D   +    +KL PPPCP++SP+ +T  +I IPLPP
Sbjct: 7   NTKGNVPFSWEKKPGVSKLINQDSDPNQEEDLVLKLLPPPCPIESPRISTHDTINIPLPP 66

Query: 256 CPFQPTPMRYSE---LRQEDDPFLVAYMKCTKS 345
           C FQP P R S    +R++DDPFL AY +CTKS
Sbjct: 67  CTFQP-PSRSSSRKGIRKQDDPFLAAYKECTKS 98


>ref|XP_002320018.1| predicted protein [Populus trichocarpa] gi|222860791|gb|EEE98333.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
 Frame = +1

Query: 67  QHQRFNSLGTIPFSWENQPGVSKAMQEIDNKPKTAPKIKLRPPPCPLDSPKATKPSIYIP 246
           +  + +S G +PFSWE +PG SK     D   +    +KL+PPPCP++S + +   I IP
Sbjct: 2   KQSKIHSKGNVPFSWEKKPGESKVTSHHDYLSRETSVVKLQPPPCPVESSRISTHDIIIP 61

Query: 247 LPPCPFQP--TPMRYSELRQ-----EDDPFLVAYMKCTKSGKP 354
           LPPC FQ    P+R S  R      +DDPFL AY +CTK  KP
Sbjct: 62  LPPCTFQAPGAPLRSSSRRGLKKDIDDDPFLAAYKECTKKDKP 104


>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
 Frame = +1

Query: 76  RFNSLGTIPFSWENQPGVSKAMQEIDNKPKTAPK--IKLRPPPCPLDSPKATKPSIYIPL 249
           + +S G +PF+WEN+PGV KA ++ ++ P       IKL+PPPCPL+  + +     IPL
Sbjct: 5   KIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGHFVIKLQPPPCPLEKGRPSVHGSQIPL 64

Query: 250 PPCPFQPTPMRYS----ELRQEDDPFLVAYMKCTKSGKPEKERK 369
           PPC FQ  P R S     LR+++DPFL AY +CTK+ +   + K
Sbjct: 65  PPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKNTRKGHDGK 108


>ref|XP_003550296.1| PREDICTED: uncharacterized protein LOC100791035 [Glycine max]
          Length = 157

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/99 (41%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
 Frame = +1

Query: 97  IPFSWENQPGVSKAMQEIDNK---PKTAPKI-KLRPPPCPLDSPKATKP--------SIY 240
           I FSWE +PGVSK       +   PK    + KL PPPC  +   AT             
Sbjct: 8   ISFSWEKKPGVSKVTTTTHGENLIPKEEEFLAKLPPPPCTPEESSATHHHKNHHPLLDFQ 67

Query: 241 IPLPPCPFQPTPMRYSELR----QEDDPFLVAYMKCTKS 345
           IPLPPC FQP   R S  R    Q+ DPFL A+ +CTK+
Sbjct: 68  IPLPPCAFQPPFYRTSSKRGLWVQDKDPFLAAFKECTKN 106


>ref|XP_003608560.1| hypothetical protein MTR_4g097480 [Medicago truncatula]
           gi|355509615|gb|AES90757.1| hypothetical protein
           MTR_4g097480 [Medicago truncatula]
          Length = 175

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
 Frame = +1

Query: 70  HQRFNSLGTIPFSWENQPGVSKA------MQEIDNKPKTAPKIKLRPPPCPLDSPK---- 219
           H++ +S G+IPFSWE++PG+ K       +  I+ K  +    KL P      S K    
Sbjct: 3   HRKSHSYGSIPFSWEDKPGICKTPNNECPLNSINKKSSS----KLSPSHFDNISKKNILE 58

Query: 220 ATKPSIYIPLPPCPFQPTPMRYSE---LRQEDDPFLVAYMKCTKSGKPEKERKRS 375
                I IPLPPC  QP P R +     + ++DPFLVAY +CTKS K  K + ++
Sbjct: 59  FQDKKISIPLPPCQTQP-PQRSTSGKGFKLQEDPFLVAYKECTKSDKNCKMQSKN 112


Top