BLASTX nr result
ID: Dioscorea21_contig00021300
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021300 (343 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote... 180 1e-43 emb|CBI20795.3| unnamed protein product [Vitis vinifera] 161 6e-38 ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 161 6e-38 sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 156 1e-36 ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li... 154 1e-35 >sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein gi|23429044|gb|AAM77469.1| retinoblastoma-like protein [Cocos nucifera] Length = 1011 Score = 180 bits (457), Expect = 1e-43 Identities = 88/114 (77%), Positives = 98/114 (85%), Gaps = 1/114 (0%) Frame = -1 Query: 343 VDFFKEMPQFYLKVGYILVSLYGSDWEKRLELKELQADIVHLRALSRYYRQAYQEFFMPS 164 VDFFKE+PQF LK GYIL LYGSDWEKRLELKELQA+IVHL LSRYY++AYQE F+P+ Sbjct: 116 VDFFKEIPQFCLKAGYILTGLYGSDWEKRLELKELQANIVHLSLLSRYYKRAYQELFLPN 175 Query: 163 Q-SSGPHSAFCNNKGYISDYHRF*WLLFLALRVHAFSQFKDLVTCTNGLVSILA 5 SSG HS N+ GY+SDYH F WLLFLALR+HAFS+FKDLVTCTNGLVSILA Sbjct: 176 DASSGRHSVAPNSVGYVSDYHHFGWLLFLALRIHAFSRFKDLVTCTNGLVSILA 229 >emb|CBI20795.3| unnamed protein product [Vitis vinifera] Length = 1006 Score = 161 bits (407), Expect = 6e-38 Identities = 81/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%) Frame = -1 Query: 343 VDFFKEMPQFYLKVGYILVSLYGSDWEKRLELKELQADIVHLRALSRYYRQAYQEFFMPS 164 VDFFKE+PQF +KVG IL +LYG DWEKRLE KELQA+ VHL LS+YY++AY EFF S Sbjct: 110 VDFFKELPQFIVKVGPILGNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTS 169 Query: 163 QSS-GPHSAFCNNKGYISDYHRF*WLLFLALRVHAFSQFKDLVTCTNGLVSILA 5 S+ S+ + GY+SDYHRF WLLFLALRVHAFS+FKDLVTCTNGLVSILA Sbjct: 170 GSNLDKQSSVISASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILA 223 >ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera] gi|254789791|sp|A7P514.1|RBR_VITVI RecName: Full=Retinoblastoma-related protein gi|359392418|gb|AEV45768.1| RBR protein [Vitis pseudoreticulata] Length = 1007 Score = 161 bits (407), Expect = 6e-38 Identities = 81/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%) Frame = -1 Query: 343 VDFFKEMPQFYLKVGYILVSLYGSDWEKRLELKELQADIVHLRALSRYYRQAYQEFFMPS 164 VDFFKE+PQF +KVG IL +LYG DWEKRLE KELQA+ VHL LS+YY++AY EFF S Sbjct: 111 VDFFKELPQFIVKVGPILGNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTS 170 Query: 163 QSS-GPHSAFCNNKGYISDYHRF*WLLFLALRVHAFSQFKDLVTCTNGLVSILA 5 S+ S+ + GY+SDYHRF WLLFLALRVHAFS+FKDLVTCTNGLVSILA Sbjct: 171 GSNLDKQSSVISASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILA 224 >sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein gi|89111303|dbj|BAE80326.1| retinoblastoma related protein [Camellia sinensis] Length = 1025 Score = 156 bits (395), Expect = 1e-36 Identities = 76/114 (66%), Positives = 91/114 (79%), Gaps = 1/114 (0%) Frame = -1 Query: 343 VDFFKEMPQFYLKVGYILVSLYGSDWEKRLELKELQADIVHLRALSRYYRQAYQEFFMPS 164 VDFFKE+PQF +K G IL + YG+DWEKRLE KELQA+ VHL LS+YY++A++EFF+ S Sbjct: 121 VDFFKELPQFIVKAGPILSNQYGTDWEKRLEAKELQANFVHLSLLSKYYKRAFREFFLTS 180 Query: 163 QSS-GPHSAFCNNKGYISDYHRF*WLLFLALRVHAFSQFKDLVTCTNGLVSILA 5 + G S GY+SDYHRF WLLFLALR HAFS+FKDLVTCTNGLV+ILA Sbjct: 181 DAKVGEQSTAAIASGYVSDYHRFGWLLFLALRTHAFSRFKDLVTCTNGLVAILA 234 >ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus] Length = 1125 Score = 154 bits (388), Expect = 1e-35 Identities = 75/114 (65%), Positives = 91/114 (79%), Gaps = 1/114 (0%) Frame = -1 Query: 343 VDFFKEMPQFYLKVGYILVSLYGSDWEKRLELKELQADIVHLRALSRYYRQAYQEFFMPS 164 V+FFKE+PQF +K G +L +LYG+DWE RLE KELQA+ VHL LS+YY++ Y+EFF + Sbjct: 220 VEFFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHLSLLSKYYKRVYREFFSTN 279 Query: 163 QSS-GPHSAFCNNKGYISDYHRF*WLLFLALRVHAFSQFKDLVTCTNGLVSILA 5 ++ SA GY+SDYHRF WLLFLALRVHAFS+FKDLVTCTNGLVSILA Sbjct: 280 DANVEKQSAISCPTGYLSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILA 333