BLASTX nr result

ID: Dioscorea21_contig00021270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021270
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|2...   182   1e-43
ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]          179   8e-43
ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]          176   9e-42
ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arab...   174   4e-41
ref|NP_001060255.1| Os07g0613300 [Oryza sativa Japonica Group] g...   173   5e-41

>ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|223539397|gb|EEF40987.1|
           Exportin-T, putative [Ricinus communis]
          Length = 988

 Score =  182 bits (462), Expect = 1e-43
 Identities = 117/315 (37%), Positives = 154/315 (48%), Gaps = 22/315 (6%)
 Frame = -2

Query: 881 DDLERAILLXXXXXXXXXXXXXXXXXAFCDCARREPPSSLLRLCLERLPRASMADPVRFW 702
           DDLE+AIL+                 +FC   + +   S+ R+C+E+L    +   V+FW
Sbjct: 2   DDLEKAILISFDESGTVDSSLKSQAVSFCQ--QIKDTKSICRICIEKLYFCKLVQ-VQFW 58

Query: 701 LLSALHEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXF--------------IKNKLSQCL 564
            L  LHE +                                          IKNKL+Q L
Sbjct: 59  CLQTLHEVIKVKYALLSLEEKDFIRKSVFSMCCFDVIDDGNAVRFLEGPAFIKNKLAQVL 118

Query: 563 STVITLHYPHSWPTPFVDLLPRLADGPHAVDMFLRXXXXXXXXXXSQDYPRDXXXXXXAS 384
            T+I   YP  W +  VD LP L+ G   +DMF R          S DYPR       A 
Sbjct: 119 VTLIYFEYPLVWSSVIVDFLPHLSKGAIVIDMFCRVLNALDDELISLDYPRTLEELTVAG 178

Query: 383 RVKDAMRMQCVPQIARAWFDVITLYRTSEPSLSASALDVARRYIPWIDIGLVANDVFLQL 204
           RVKDAMR QCV QI RAW+D+I++YR S+P + ++ LD  RRYI W+DIGL+ ND F+ L
Sbjct: 179 RVKDAMRQQCVGQIVRAWYDIISMYRNSDPEVCSNVLDSMRRYISWVDIGLIVNDAFIPL 238

Query: 203 LFE--LVECSEEQXXXXXXXXXXXXXAKRMDPRPKLSLLRSLQFNRLF------SRQDSV 48
           LFE  LV    EQ             +KRMDP+ KL++L+SLQ +R+F      S  + V
Sbjct: 239 LFELILVYGESEQLQGAAAGCILAVVSKRMDPQSKLTILKSLQISRVFALVTGDSESELV 298

Query: 47  CSLAHLITGYAVEAL 3
             +A LITGYAVE L
Sbjct: 299 SKIAALITGYAVEVL 313


>ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 986

 Score =  179 bits (454), Expect = 8e-43
 Identities = 115/312 (36%), Positives = 153/312 (49%), Gaps = 19/312 (6%)
 Frame = -2

Query: 881 DDLERAILLXXXXXXXXXXXXXXXXXAFCDCARREPPSSLLRLCLERLPRASMADPVRFW 702
           DDLERAIL+                  +C+  + +P   + RLC+E+L  +++   V+FW
Sbjct: 2   DDLERAILVMFDESGALDDDLKKQAKVYCNDIKEKP--LICRLCIEKLCFSNLVQ-VQFW 58

Query: 701 LLSALHEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXF-----------IKNKLSQCLSTV 555
            L  LHE +                                       IKNKL+Q L T+
Sbjct: 59  CLQTLHEVIRTRYLTMTPDERHMIRGSVFSIVCLEDKNLTRVLEGPAFIKNKLAQVLITL 118

Query: 554 ITLHYPHSWPTPFVDLLPRLADGPHAVDMFLRXXXXXXXXXXSQDYPRDXXXXXXASRVK 375
           I   YP  W + FVD  P L+ G   +DMF R          S DYPR       A RVK
Sbjct: 119 IYFEYPLVWSSVFVDFFPHLSKGNVVIDMFCRVLNALDDELISLDYPRTPEELAVAGRVK 178

Query: 374 DAMRMQCVPQIARAWFDVITLYRTSEPSLSASALDVARRYIPWIDIGLVANDVFLQLLFE 195
           DAMR QCVPQI RAW+D++++YR S+  L  S LD  RRYI WIDIGL+ ND F+ LLF+
Sbjct: 179 DAMRQQCVPQIVRAWYDIVSMYRNSDHELCTSVLDSMRRYISWIDIGLIVNDAFIPLLFD 238

Query: 194 LVECS--EEQXXXXXXXXXXXXXAKRMDPRPKLSLLRSLQFNRLFS------RQDSVCSL 39
           L+      +Q             +KRM+P  KLSLL+SLQ +R+          + V  +
Sbjct: 239 LILVGPLSDQLRGASVRCLLAVVSKRMEPESKLSLLQSLQISRVLRLVTEDVDVELVSDI 298

Query: 38  AHLITGYAVEAL 3
           A L++GYAVEAL
Sbjct: 299 AALLSGYAVEAL 310


>ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 983

 Score =  176 bits (445), Expect = 9e-42
 Identities = 113/312 (36%), Positives = 151/312 (48%), Gaps = 19/312 (6%)
 Frame = -2

Query: 881 DDLERAILLXXXXXXXXXXXXXXXXXAFCDCARREPPSSLLRLCLERLPRASMADPVRFW 702
           DDLERAIL+                  +C+  + +P   + RLC+E+L  +++   V+FW
Sbjct: 2   DDLERAILVIFDESGTLDDDLKKQAELYCNDVKEKP--LICRLCIEKLCFSNLVQ-VQFW 58

Query: 701 LLSALHEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXF-----------IKNKLSQCLSTV 555
            L  LHE +                                       IKNKL+Q L T+
Sbjct: 59  CLQTLHEVIRTRYLTMTPDERHMIRGSVFSIVCLEDKNLTRVLEGPAFIKNKLAQVLITL 118

Query: 554 ITLHYPHSWPTPFVDLLPRLADGPHAVDMFLRXXXXXXXXXXSQDYPRDXXXXXXASRVK 375
           I   YP  W + FVD  P L+ G   +DMF R          + DYPR       A RVK
Sbjct: 119 IYFEYPLVWSSVFVDFFPHLSKGNVVIDMFCRVLNALDDELINLDYPRTPEELTVAGRVK 178

Query: 374 DAMRMQCVPQIARAWFDVITLYRTSEPSLSASALDVARRYIPWIDIGLVANDVFLQLLFE 195
           DAMR QCV QI R W+D++++YR S+  L  S LD  RRYI WIDIGL+ ND F+ LLF+
Sbjct: 179 DAMRQQCVCQIVRVWYDIVSMYRNSDQELCTSVLDSMRRYISWIDIGLIVNDAFIPLLFD 238

Query: 194 LVECS--EEQXXXXXXXXXXXXXAKRMDPRPKLSLLRSLQFNRLF------SRQDSVCSL 39
           L+       Q             +KRM+P+ KLSLLRSLQ +R+          + V  +
Sbjct: 239 LILVGPLSVQLRGAAVRCLLAVVSKRMEPQSKLSLLRSLQISRVLRLVTEDGDAELVSDI 298

Query: 38  AHLITGYAVEAL 3
           A L++GYAVEAL
Sbjct: 299 AALLSGYAVEAL 310


>ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arabidopsis lyrata subsp.
           lyrata] gi|297334725|gb|EFH65143.1| hypothetical protein
           ARALYDRAFT_476390 [Arabidopsis lyrata subsp. lyrata]
          Length = 978

 Score =  174 bits (440), Expect = 4e-41
 Identities = 95/204 (46%), Positives = 125/204 (61%), Gaps = 8/204 (3%)
 Frame = -2

Query: 590 IKNKLSQCLSTVITLHYPHSWPTPFVDLLPRLADGPHAVDMFLRXXXXXXXXXXSQDYPR 411
           +KNKL+Q L T+I   YP  W + FVD +P L+ G   +DMF R          S DYPR
Sbjct: 109 VKNKLAQVLVTLIYFDYPLIWSSVFVDFMPHLSKGAVVIDMFCRVLNALDDELISLDYPR 168

Query: 410 DXXXXXXASRVKDAMRMQCVPQIARAWFDVITLYRTSEPSLSASALDVARRYIPWIDIGL 231
                  A+RVKDAMR QCVPQIARAW+D+++LYR S+P LSA+ LD  RR++ WIDIGL
Sbjct: 169 TSEEISVAARVKDAMRQQCVPQIARAWYDIVSLYRNSDPDLSATVLDCMRRFVSWIDIGL 228

Query: 230 VANDVFLQLLFELV--ECSEEQXXXXXXXXXXXXXAKRMDPRPKLSLLRSLQFNRLFS-- 63
           VAND F+ LLFEL+  +   +              +KRMDP+ KL LL++LQ +R+F   
Sbjct: 229 VANDAFVPLLFELILSDGLSDHFRGAAAGCILAMVSKRMDPQSKLPLLQTLQISRVFGLV 288

Query: 62  ----RQDSVCSLAHLITGYAVEAL 3
                 + V  ++ L+TGYAVE L
Sbjct: 289 SGDVDSELVSKVSALLTGYAVEVL 312


>ref|NP_001060255.1| Os07g0613300 [Oryza sativa Japonica Group]
           gi|75152194|sp|Q8H3A7.1|XPOT_ORYSJ RecName:
           Full=Exportin-T; AltName: Full=Exportin(tRNA); AltName:
           Full=Protein PAUSED homolog; AltName: Full=tRNA exportin
           gi|23237918|dbj|BAC16491.1| putative exportin, tRNA
           [Oryza sativa Japonica Group]
           gi|33146701|dbj|BAC79501.1| putative exportin, tRNA
           (nuclear export receptor for tRNAs) [Oryza sativa
           Japonica Group] gi|113611791|dbj|BAF22169.1|
           Os07g0613300 [Oryza sativa Japonica Group]
           gi|215695211|dbj|BAG90402.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 980

 Score =  173 bits (439), Expect = 5e-41
 Identities = 120/304 (39%), Positives = 150/304 (49%), Gaps = 11/304 (3%)
 Frame = -2

Query: 881 DDLERAILLXXXXXXXXXXXXXXXXXAFCDCARRE---PPSSLLRLCLERLPRASMADPV 711
           DDLE+AILL                 A   CAR     PPSSLL LCL  L  +  A  V
Sbjct: 2   DDLEQAILLASDSPAAAAASPAVRAEALAYCARARDETPPSSLLHLCLYGLASSPHAH-V 60

Query: 710 RFWLLSALHEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXF-----IKNKLSQCLSTVITL 546
            FW L  +H+A+                                 ++NKL+Q L+ ++  
Sbjct: 61  HFWCLQTIHDALLLRRRLALPDDLALLRSSLLSLAVSSNAASPPFLRNKLAQLLALLVRF 120

Query: 545 HYPHSWPTPFVDLLPRLADGPHAVDMFLRXXXXXXXXXXSQDYPRDXXXXXXASRVKDAM 366
            YPH +P+ F+DL+P     P   DMF R          SQDYPR+      A RVKDAM
Sbjct: 121 EYPHVYPSYFLDLIPPSPPLPGPTDMFARVLVSLDDDLLSQDYPRNAEEASDAGRVKDAM 180

Query: 365 RMQCVPQIARAWFDVITLYRTSEPSLSASALDVARRYIPWIDIGLVANDVFLQLLFE--L 192
           R QCVPQIAR W +     R ++P+++A ALD ARR I WID+ LVANDVF+ LLF+  L
Sbjct: 181 RAQCVPQIARHWHEAAVSLRAADPAVAAVALDAARRCISWIDVSLVANDVFVPLLFDIAL 240

Query: 191 VECSEEQXXXXXXXXXXXXXAKRMDPRPKLSLLRSL-QFNRLFSRQDSVCSLAHLITGYA 15
              S                AKRMD R K++LLRSL    + F   DS   +AHL+T YA
Sbjct: 241 SPGSVAPLAAAAVGCLSAVAAKRMDARAKVALLRSLMSAQKGFGSPDSGLKMAHLVTAYA 300

Query: 14  VEAL 3
           VEAL
Sbjct: 301 VEAL 304


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