BLASTX nr result

ID: Dioscorea21_contig00021220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021220
         (1837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-contain...   333   7e-89
ref|XP_002331442.1| methyl binding domain protein [Populus trich...   314   6e-83
gb|EAZ09602.1| hypothetical protein OsI_31886 [Oryza sativa Indi...   308   3e-81
ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-contain...   307   5e-81
ref|NP_001063550.1| Os09g0494300 [Oryza sativa Japonica Group] g...   306   2e-80

>ref|XP_002263085.1| PREDICTED: methyl-CpG-binding domain-containing protein 2 [Vitis
            vinifera] gi|297736061|emb|CBI24099.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  333 bits (855), Expect = 7e-89
 Identities = 169/268 (63%), Positives = 204/268 (76%), Gaps = 8/268 (2%)
 Frame = -2

Query: 1671 PQNVINTPEKQSDTASVVLEDTVDRSFESTPNQLVLYDHSGSSTSQDALVAVEPTDD--- 1501
            P ++ ++ E++ D  +   ED  + S+E+T NQLV+YD   +S ++     VEP  D   
Sbjct: 33   PIDLSSSEEEEEDFYAE--EDDDNHSYENTSNQLVVYDPVANSATE-----VEPVPDPIQ 85

Query: 1500 FSLTSESSY-VPRPSSRVLPSVGAFTVQCAACFKWRLIPTKEKYEEIRETILQEPFLCDR 1324
            + L S + Y      SRVLPSVGAFTVQCA CFKWRLIPTKEKYEEIRE IL++PF+C+ 
Sbjct: 86   YRLPSFTGYSTTNAPSRVLPSVGAFTVQCANCFKWRLIPTKEKYEEIREHILEQPFVCET 145

Query: 1323 AREWRPDITCDDPEDISQDGSRLWAIDKPNISQPPPGWERLLRIRGEGSTRFADIYYVAP 1144
            AREWRP+++CDDP DISQDGSRLWAIDKPNI+QPP GW+RLLRIRGEGST+FAD+YYVAP
Sbjct: 146  AREWRPNVSCDDPADISQDGSRLWAIDKPNIAQPPAGWQRLLRIRGEGSTKFADVYYVAP 205

Query: 1143 SGKRLRSMVEIERYLLEHPEYIRDGVTMSQFSFQIPRPLQENYVRKRPRPPN----PHKG 976
            SGKRLRSMVE+++YLLEHPEY+  GVT+SQFSFQIP+PLQENYVRKRP   N        
Sbjct: 206  SGKRLRSMVEVQKYLLEHPEYMVHGVTLSQFSFQIPKPLQENYVRKRPARVNAGSYDDTT 265

Query: 975  GLGLPRPLEPEEVNPLSWEAPPICPDIQ 892
              G+ RPLEP EVNPLSW  P  C D+Q
Sbjct: 266  SSGMSRPLEPGEVNPLSWAGPAECIDLQ 293


>ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
            gi|222873656|gb|EEF10787.1| methyl binding domain protein
            [Populus trichocarpa]
          Length = 343

 Score =  314 bits (804), Expect = 6e-83
 Identities = 165/289 (57%), Positives = 198/289 (68%), Gaps = 5/289 (1%)
 Frame = -2

Query: 1734 VLMQSHSEKTATEVEQEHSASPQNVINTPEKQSDTASVVLEDTVDRSFESTPNQLVLYDH 1555
            VL +   + T +      ++S Q  I      ++  S    D  D+S E +  QLVLYD 
Sbjct: 11   VLKKEGDDCTGSRYTGHLNSSLQEPIEVSSSSNEDNSDDTWDIDDQSIEDSSKQLVLYDP 70

Query: 1554 SGSSTSQDALVAVEPTDDFSLTSES----SYVPRPSSRVLPSVGAFTVQCAACFKWRLIP 1387
              +   +     +EP     L+       S +  PS RVLPSVGAFTVQCA CFKWRLIP
Sbjct: 71   LANDAGE-----IEPVPQPILSHHPFRRYSDLNVPS-RVLPSVGAFTVQCAKCFKWRLIP 124

Query: 1386 TKEKYEEIRETILQEPFLCDRAREWRPDITCDDPEDISQDGSRLWAIDKPNISQPPPGWE 1207
            TK+KYEE+RE IL+EPF C+ AREWRPDI+CDDP DI QDGSRLWAIDKPNI+QPPPGW+
Sbjct: 125  TKQKYEELREHILEEPFFCETAREWRPDISCDDPTDIDQDGSRLWAIDKPNIAQPPPGWQ 184

Query: 1206 RLLRIRGEGSTRFADIYYVAPSGKRLRSMVEIERYLLEHPEYIRDGVTMSQFSFQIPRPL 1027
            RLLRIRGEGST+FAD+YY APSGKRLRSMVEI++YL+EHPEY+RDG+T++QFSFQIP+PL
Sbjct: 185  RLLRIRGEGSTKFADVYYQAPSGKRLRSMVEIQKYLIEHPEYMRDGITLTQFSFQIPKPL 244

Query: 1026 QENYVR-KRPRPPNPHKGGLGLPRPLEPEEVNPLSWEAPPICPDIQTGR 883
            QENYVR KRPR              LEP E NPL W  P  C ++Q GR
Sbjct: 245  QENYVRKKRPRLS---------ASCLEPGEANPLKWVGPGDCTELQLGR 284


>gb|EAZ09602.1| hypothetical protein OsI_31886 [Oryza sativa Indica Group]
          Length = 383

 Score =  308 bits (789), Expect = 3e-81
 Identities = 157/300 (52%), Positives = 212/300 (70%), Gaps = 1/300 (0%)
 Frame = -2

Query: 1725 QSHSEKTATEVEQEHSASPQNVINTPEKQSDTASVVLEDTVDRSFESTPNQLVLYDHSGS 1546
            Q+H  K+  +    +S +PQ    +    SDT    L D  + S ES  NQ+VL++    
Sbjct: 58   QAHHRKSCKK-PMGNSKTPQPSKKSRIMLSDTDGHQL-DNDEFSSESASNQMVLFNPETV 115

Query: 1545 STSQDALVAVEPTDDFSLTSESSYVPRPSSRVLPSVGAFTVQCAACFKWRLIPTKEKYEE 1366
            +  QD L      ++ S + + S      +R +PS+GAFTVQCA CFKWRLIPTKEKYEE
Sbjct: 116  AKGQDEL-----GENHSPSLQKS--ANNPNRGMPSIGAFTVQCAKCFKWRLIPTKEKYEE 168

Query: 1365 IRETILQEPFLCDRAREWRPDITCDDPEDISQDGSRLWAIDKPNISQPPPGWERLLRIRG 1186
            IRE I+QEPF C+RAREWRPD+TC+DPEDISQDGSRLWAIDKPNI+ PPPGWER +RIRG
Sbjct: 169  IRECIIQEPFECERAREWRPDVTCNDPEDISQDGSRLWAIDKPNIALPPPGWERQIRIRG 228

Query: 1185 EGSTRFADIYYVAPSGKRLRSMVEIERYLLEHPEYIRDGVTMSQFSFQIPRPLQENYVRK 1006
            EG T+FAD+YY +P+G++LRS+VEI+RYLLE+P+Y+  GVT++QFSFQIPRPL+++YV+K
Sbjct: 229  EGGTKFADVYYTSPTGRKLRSLVEIDRYLLENPDYVAQGVTLTQFSFQIPRPLRQDYVKK 288

Query: 1005 RPRPPNPH-KGGLGLPRPLEPEEVNPLSWEAPPICPDIQTGRSRSLAIINGHPDHPPSME 829
            RP+  NP+ +  +   + ++PEEV+P++W AP +  + + G+  S      H D PP  E
Sbjct: 289  RPKIVNPNDEASVVTTKSVKPEEVSPIAWAAPSVHQEGEAGKRAS------HADEPPEAE 342


>ref|XP_003529090.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
            [Glycine max]
          Length = 309

 Score =  307 bits (787), Expect = 5e-81
 Identities = 163/268 (60%), Positives = 192/268 (71%), Gaps = 5/268 (1%)
 Frame = -2

Query: 1614 EDTVDRSFESTPNQLVLYDHSGSSTSQDALVAVEPTDDFSLTSESSYVPR--PSS---RV 1450
            +D  D   +   NQLVLYD   +  +     A+E   D  L  E   +PR  PS    RV
Sbjct: 41   DDENDLPNDDVSNQLVLYDPVANGNN-----AIELAPD-PLQCEHPLLPRSKPSHSVPRV 94

Query: 1449 LPSVGAFTVQCAACFKWRLIPTKEKYEEIRETILQEPFLCDRAREWRPDITCDDPEDISQ 1270
            LPSVGAFTVQCA+CFKWRLIPTKEKYEEIRE IL++PF+C +AREWRP ++CDDPEDISQ
Sbjct: 95   LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHILEQPFVCQKAREWRPHVSCDDPEDISQ 154

Query: 1269 DGSRLWAIDKPNISQPPPGWERLLRIRGEGSTRFADIYYVAPSGKRLRSMVEIERYLLEH 1090
            DGSR+WAIDKPNI+QPP GWERLLRIR EGS++FADIYY+APSGKRLRSMVEI+++L+EH
Sbjct: 155  DGSRVWAIDKPNIAQPPAGWERLLRIRAEGSSKFADIYYIAPSGKRLRSMVEIQKFLMEH 214

Query: 1089 PEYIRDGVTMSQFSFQIPRPLQENYVRKRPRPPNPHKGGLGLPRPLEPEEVNPLSWEAPP 910
            PEY RDGVT+SQFSFQIPRPLQENYVRKRP           +  P+E E+V+PL+W  P 
Sbjct: 215  PEYTRDGVTLSQFSFQIPRPLQENYVRKRPARLT---SSYEVSEPVEHEQVSPLAWVDP- 270

Query: 909  ICPDIQTGRSRSLAIINGHPDHPPSMES 826
                   G  R L +       PP MES
Sbjct: 271  ------EGHGRRLGL-----PAPPFMES 287


>ref|NP_001063550.1| Os09g0494300 [Oryza sativa Japonica Group]
            gi|113631783|dbj|BAF25464.1| Os09g0494300 [Oryza sativa
            Japonica Group] gi|215715253|dbj|BAG95004.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 315

 Score =  306 bits (783), Expect = 2e-80
 Identities = 154/286 (53%), Positives = 205/286 (71%), Gaps = 1/286 (0%)
 Frame = -2

Query: 1683 HSASPQNVINTPEKQSDTASVVLEDTVDRSFESTPNQLVLYDHSGSSTSQDALVAVEPTD 1504
            +S +PQ    +    SDT    L D  + S ES  NQ+VL++    +  QD L      +
Sbjct: 3    NSKTPQPSKKSRIMLSDTDGHQL-DNDEFSSESASNQMVLFNPETVAKGQDEL-----GE 56

Query: 1503 DFSLTSESSYVPRPSSRVLPSVGAFTVQCAACFKWRLIPTKEKYEEIRETILQEPFLCDR 1324
            + S + + S      +R +PS+GAFTVQCA CFKWRLIPTKEKYEEIRE I+QEPF C+R
Sbjct: 57   NHSPSLQKS--ANNPNRGMPSIGAFTVQCAKCFKWRLIPTKEKYEEIRECIIQEPFECER 114

Query: 1323 AREWRPDITCDDPEDISQDGSRLWAIDKPNISQPPPGWERLLRIRGEGSTRFADIYYVAP 1144
            AREWRPD+TC+DPEDISQDGSRLWAIDKPNI+ PPPGWER +RIRGEG T+FAD+YY +P
Sbjct: 115  AREWRPDVTCNDPEDISQDGSRLWAIDKPNIALPPPGWERQIRIRGEGGTKFADVYYTSP 174

Query: 1143 SGKRLRSMVEIERYLLEHPEYIRDGVTMSQFSFQIPRPLQENYVRKRPRPPNPH-KGGLG 967
            +G++LRS+VEI+RYLLE+P+Y+  GVT++QFSFQIPRPL+++YV+KRP+  NP+ +  + 
Sbjct: 175  TGRKLRSLVEIDRYLLENPDYVAQGVTLTQFSFQIPRPLRQDYVKKRPKIVNPNDEASVV 234

Query: 966  LPRPLEPEEVNPLSWEAPPICPDIQTGRSRSLAIINGHPDHPPSME 829
              + ++PEEV+P++W AP +  + + G   S      H D PP  E
Sbjct: 235  TTKSVKPEEVSPIAWAAPSVHQEGEAGERAS------HADEPPEAE 274


Top