BLASTX nr result

ID: Dioscorea21_contig00021219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021219
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01644.1| predicted protein [Hordeum vulgare subsp. vulgare]    126   2e-27
ref|XP_002298234.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
gb|EEE54178.1| hypothetical protein OsJ_00998 [Oryza sativa Japo...   121   5e-26
gb|EEC70243.1| hypothetical protein OsI_01027 [Oryza sativa Indi...   121   5e-26
ref|NP_001042502.1| Os01g0232300 [Oryza sativa Japonica Group] g...   121   5e-26

>dbj|BAK01644.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 958

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 71/80 (88%)
 Frame = -1

Query: 251  IGVGTAAGAYRIILTHFSQRYPKIPVLDEACTHNTCIAFDLMSINLADLPMLPKVLPYLK 72
            I VGT+AGAYRIILTHFSQRYPKIPV DE   H TCIAFDLMS+NLADLP+LPKVLP+LK
Sbjct: 879  IAVGTSAGAYRIILTHFSQRYPKIPVFDEDDMHKTCIAFDLMSVNLADLPVLPKVLPHLK 938

Query: 71   VLFRDQMGLEESEEILDGAL 12
            +LF+D+M +EES+E+L+  +
Sbjct: 939  LLFKDEMVVEESDEVLEAVV 958


>ref|XP_002298234.1| predicted protein [Populus trichocarpa] gi|222845492|gb|EEE83039.1|
           predicted protein [Populus trichocarpa]
          Length = 829

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/79 (69%), Positives = 70/79 (88%)
 Frame = -1

Query: 251 IGVGTAAGAYRIILTHFSQRYPKIPVLDEACTHNTCIAFDLMSINLADLPMLPKVLPYLK 72
           I VG +AGAYRIILTHFSQRYPKIPV DE   H TCIAFD+MS+N+ADLP+LP+VLPYLK
Sbjct: 746 IEVGNSAGAYRIILTHFSQRYPKIPVFDETHMHKTCIAFDMMSVNIADLPVLPRVLPYLK 805

Query: 71  VLFRDQMGLEESEEILDGA 15
           +LFR++M ++ES++++D A
Sbjct: 806 MLFRNEMVVDESDDVVDAA 824


>gb|EEE54178.1| hypothetical protein OsJ_00998 [Oryza sativa Japonica Group]
          Length = 964

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 251  IGVGTAAGAYRIILTHFSQRYPKIPVLDEACTHNTCIAFDLMSINLADLPMLPKVLPYLK 72
            I VGT+AGAYRIILTHFSQRYPKIPV DE     TCIAFDLMS+NLADLP+LPKVLP+LK
Sbjct: 885  IAVGTSAGAYRIILTHFSQRYPKIPVFDEVDMQKTCIAFDLMSVNLADLPVLPKVLPHLK 944

Query: 71   VLFRDQMGLEESEEILDGAL 12
            +LF+D+M ++ES+EI +  +
Sbjct: 945  LLFKDEMVVDESDEIQEAVM 964


>gb|EEC70243.1| hypothetical protein OsI_01027 [Oryza sativa Indica Group]
          Length = 945

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 251  IGVGTAAGAYRIILTHFSQRYPKIPVLDEACTHNTCIAFDLMSINLADLPMLPKVLPYLK 72
            I VGT+AGAYRIILTHFSQRYPKIPV DE     TCIAFDLMS+NLADLP+LPKVLP+LK
Sbjct: 866  IAVGTSAGAYRIILTHFSQRYPKIPVFDEVDMQKTCIAFDLMSVNLADLPVLPKVLPHLK 925

Query: 71   VLFRDQMGLEESEEILDGAL 12
            +LF+D+M ++ES+EI +  +
Sbjct: 926  LLFKDEMVVDESDEIQEAVM 945


>ref|NP_001042502.1| Os01g0232300 [Oryza sativa Japonica Group]
           gi|113532033|dbj|BAF04416.1| Os01g0232300 [Oryza sativa
           Japonica Group]
          Length = 537

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/80 (71%), Positives = 69/80 (86%)
 Frame = -1

Query: 251 IGVGTAAGAYRIILTHFSQRYPKIPVLDEACTHNTCIAFDLMSINLADLPMLPKVLPYLK 72
           I VGT+AGAYRIILTHFSQRYPKIPV DE     TCIAFDLMS+NLADLP+LPKVLP+LK
Sbjct: 458 IAVGTSAGAYRIILTHFSQRYPKIPVFDEVDMQKTCIAFDLMSVNLADLPVLPKVLPHLK 517

Query: 71  VLFRDQMGLEESEEILDGAL 12
           +LF+D+M ++ES+EI +  +
Sbjct: 518 LLFKDEMVVDESDEIQEAVM 537


Top