BLASTX nr result

ID: Dioscorea21_contig00021218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021218
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   153   2e-53
emb|CBI21551.3| unnamed protein product [Vitis vinifera]              153   2e-53
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]   153   2e-53
ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glyc...   155   3e-53
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...   155   2e-52

>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  153 bits (386), Expect(2) = 2e-53
 Identities = 83/109 (76%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = +3

Query: 567 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPNAIALSGHLLLGQPVMVKPSEAEKNLVQST 746
           VRDVRLIMDRNSRRSKGVGY+EFYD MSVP AIALSGHLL GQPVMVKPSEAEKNLVQS 
Sbjct: 196 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 255

Query: 747 TXXXXXXXXXXXL----RKLYVGNLHFSITEDQLRQIFEPFGPVELVQL 881
                            RKLYVGNLHF++TE QLRQIFEPFG VELVQL
Sbjct: 256 ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQL 304



 Score = 83.2 bits (204), Expect(2) = 2e-53
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +1

Query: 367 YKDKKEVVELEADPERDQRTVFAYQMPLKATERDVYEFFSQVGK 498
           +KDKKE VE EADPERDQRTVFAYQMPLKATERDVYEFFS+ GK
Sbjct: 152 FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 195


>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  153 bits (386), Expect(2) = 2e-53
 Identities = 83/109 (76%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = +3

Query: 567 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPNAIALSGHLLLGQPVMVKPSEAEKNLVQST 746
           VRDVRLIMDRNSRRSKGVGY+EFYD MSVP AIALSGHLL GQPVMVKPSEAEKNLVQS 
Sbjct: 158 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 217

Query: 747 TXXXXXXXXXXXL----RKLYVGNLHFSITEDQLRQIFEPFGPVELVQL 881
                            RKLYVGNLHF++TE QLRQIFEPFG VELVQL
Sbjct: 218 ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQL 266



 Score = 83.2 bits (204), Expect(2) = 2e-53
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +1

Query: 367 YKDKKEVVELEADPERDQRTVFAYQMPLKATERDVYEFFSQVGK 498
           +KDKKE VE EADPERDQRTVFAYQMPLKATERDVYEFFS+ GK
Sbjct: 114 FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 157


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score =  153 bits (386), Expect(2) = 2e-53
 Identities = 83/109 (76%), Positives = 86/109 (78%), Gaps = 4/109 (3%)
 Frame = +3

Query: 567 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPNAIALSGHLLLGQPVMVKPSEAEKNLVQST 746
           VRDVRLIMDRNSRRSKGVGY+EFYD MSVP AIALSGHLL GQPVMVKPSEAEKNLVQS 
Sbjct: 122 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNLVQSN 181

Query: 747 TXXXXXXXXXXXL----RKLYVGNLHFSITEDQLRQIFEPFGPVELVQL 881
                            RKLYVGNLHF++TE QLRQIFEPFG VELVQL
Sbjct: 182 ASGAVSGGIAGPYGAVDRKLYVGNLHFNMTELQLRQIFEPFGRVELVQL 230



 Score = 83.2 bits (204), Expect(2) = 2e-53
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +1

Query: 367 YKDKKEVVELEADPERDQRTVFAYQMPLKATERDVYEFFSQVGK 498
           +KDKKE VE EADPERDQRTVFAYQMPLKATERDVYEFFS+ GK
Sbjct: 78  FKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 121


>ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 550

 Score =  155 bits (391), Expect(2) = 3e-53
 Identities = 82/108 (75%), Positives = 87/108 (80%), Gaps = 3/108 (2%)
 Frame = +3

Query: 567 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPNAIALSGHLLLGQPVMVKPSEAEKNLVQST 746
           VRDVRLIMDRNSRRSKGVGY+EFYD MSVP AIALSG LLLGQPVMVKPSEAEKNLVQS 
Sbjct: 217 VRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 276

Query: 747 T---XXXXXXXXXXXLRKLYVGNLHFSITEDQLRQIFEPFGPVELVQL 881
                           RKLYVGNLHF++TE QLR+IFEPFGPVE+VQL
Sbjct: 277 ASGGAAGVTGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQL 324



 Score = 80.5 bits (197), Expect(2) = 3e-53
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +1

Query: 367 YKDKKEVVELEADPERDQRTVFAYQMPLKATERDVYEFFSQVGK 498
           ++DKKE  E EADPERDQRTVFAYQMPLKATERDVYEFFS+ GK
Sbjct: 173 FRDKKEAAEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 216


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  155 bits (392), Expect(2) = 2e-52
 Identities = 84/106 (79%), Positives = 87/106 (82%), Gaps = 1/106 (0%)
 Frame = +3

Query: 567 VRDVRLIMDRNSRRSKGVGYVEFYDVMSVPNAIALSGHLLLGQPVMVKPSEAEKNLVQS- 743
           VRDVRLIMDRNSRRSKGVGYVEFYD MSVP AIALSG LLLGQPVMVKPSEAEKNLVQS 
Sbjct: 257 VRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSN 316

Query: 744 TTXXXXXXXXXXXLRKLYVGNLHFSITEDQLRQIFEPFGPVELVQL 881
           TT            RKLYVGNLHF++TE  LR+IFE FGPVELVQL
Sbjct: 317 TTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQL 362



 Score = 77.8 bits (190), Expect(2) = 2e-52
 Identities = 36/43 (83%), Positives = 39/43 (90%)
 Frame = +1

Query: 370 KDKKEVVELEADPERDQRTVFAYQMPLKATERDVYEFFSQVGK 498
           K+KK+  E EADPERDQRTVFAYQMPLKATERDVYEFFS+ GK
Sbjct: 214 KEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGK 256


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