BLASTX nr result
ID: Dioscorea21_contig00021175
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021175 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga... 85 6e-17 ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein A... 90 2e-16 ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844... 89 3e-16 emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 89 5e-16 emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga... 86 3e-15 >emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1381 Score = 84.7 bits (208), Expect(2) = 6e-17 Identities = 39/82 (47%), Positives = 57/82 (69%) Frame = -2 Query: 298 PFRVGDLPISGGRPRRQDWDILLNKIITRLASWKAKLLSLGGRLTLVNSVLTAIPTYWMS 119 PF LPI + + WD ++NKI +LA+WK ++LS+GGRLTL+ S L+ +P Y+MS Sbjct: 743 PFTYLGLPIGENIHKIKAWDPIINKISMKLATWKGRMLSIGGRLTLIKSSLSNLPLYFMS 802 Query: 118 IFKLPTWVIKNIDKIRRDFLWS 53 +F +P V++ I+KI R FLWS Sbjct: 803 LFPIPKGVVEKINKITRRFLWS 824 Score = 27.3 bits (59), Expect(2) = 6e-17 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 338 CNAGSLPITYLGIPI 294 C G +P TYLG+PI Sbjct: 737 CKTGDIPFTYLGLPI 751 >ref|XP_003550922.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine max] Length = 549 Score = 90.1 bits (222), Expect = 2e-16 Identities = 47/103 (45%), Positives = 68/103 (66%), Gaps = 1/103 (0%) Frame = -2 Query: 307 LAFPFRVGDLPISGGRPRR-QDWDILLNKIITRLASWKAKLLSLGGRLTLVNSVLTAIPT 131 ++FPF +PI G PRR Q W+ L+NK +LA WK + LS GGR+ L+NSVLT+IP Sbjct: 151 MSFPFTYLGIPI-GANPRRCQMWEPLINKCERKLAGWKQRHLSFGGRVILINSVLTSIPI 209 Query: 130 YWMSIFKLPTWVIKNIDKIRRDFLWSSPEPQHNKIRLFSYERL 2 Y++S F++P VI I +++R+FLW Q NKI +E++ Sbjct: 210 YFLSFFRVPRQVISKITRLQRNFLWGGAADQ-NKIPWIKWEKV 251 >ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium distachyon] Length = 2492 Score = 89.4 bits (220), Expect = 3e-16 Identities = 41/89 (46%), Positives = 60/89 (67%) Frame = -2 Query: 301 FPFRVGDLPISGGRPRRQDWDILLNKIITRLASWKAKLLSLGGRLTLVNSVLTAIPTYWM 122 FP + LP+ +PRR + LL+K+ +L +WK KL++ GRL L+NSVLTA TY++ Sbjct: 1717 FPCKYLGLPLGFRKPRRVEIQPLLDKMAMKLQNWKGKLINRAGRLVLINSVLTATTTYFL 1776 Query: 121 SIFKLPTWVIKNIDKIRRDFLWSSPEPQH 35 +IF +W IK +DK+RR+FLW+ E H Sbjct: 1777 TIFPADSWAIKKMDKMRRNFLWAGDEQAH 1805 >emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1383 Score = 88.6 bits (218), Expect = 5e-16 Identities = 43/106 (40%), Positives = 71/106 (66%) Frame = -2 Query: 319 LSLTLAFPFRVGDLPISGGRPRRQDWDILLNKIITRLASWKAKLLSLGGRLTLVNSVLTA 140 L T + PF+ LPI G R WD +++++ RLA+WK K+LS+GGR+TL+ + L++ Sbjct: 736 LCRTGSLPFKYLGLPIGGNLSRIDTWDPIVDRMGKRLATWKGKMLSIGGRITLIKASLSS 795 Query: 139 IPTYWMSIFKLPTWVIKNIDKIRRDFLWSSPEPQHNKIRLFSYERL 2 +P Y+MS+F +P VI + +I+R+FLWS E + + L ++E+L Sbjct: 796 LPLYFMSLFPIPKGVIDKLVRIQRNFLWSGVEGK-RALPLVAWEKL 840 >emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1380 Score = 85.9 bits (211), Expect = 3e-15 Identities = 38/84 (45%), Positives = 59/84 (70%) Frame = -2 Query: 304 AFPFRVGDLPISGGRPRRQDWDILLNKIITRLASWKAKLLSLGGRLTLVNSVLTAIPTYW 125 + PF LPI G R + W+ +L +I +L SWK +LLS+GGR+TL+ S ++++P Y+ Sbjct: 741 SLPFNYLGLPIGGDSSRIKTWEPILERISKKLDSWKGRLLSIGGRVTLIKSSISSLPLYF 800 Query: 124 MSIFKLPTWVIKNIDKIRRDFLWS 53 MS+F +P VI+ I+K++R FLWS Sbjct: 801 MSLFPIPRSVIEQINKLQRHFLWS 824