BLASTX nr result

ID: Dioscorea21_contig00021153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021153
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   143   6e-32
ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   141   3e-31
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]   136   8e-30
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   135   2e-29
ref|NP_001044592.1| Os01g0812000 [Oryza sativa Japonica Group] g...   108   2e-21

>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
            gi|223535153|gb|EEF36833.1| r2r3-myb transcription
            factor, putative [Ricinus communis]
          Length = 556

 Score =  143 bits (361), Expect = 6e-32
 Identities = 100/262 (38%), Positives = 132/262 (50%), Gaps = 34/262 (12%)
 Frame = +2

Query: 2    AHTLLNGNFSAPRPIPGSVELELPSLQYPDTDLGSWSVSHAP-PDPIDTYVQSPPGTMPL 178
            +HTL NG+FS  +   G V+LELPSLQYP+TDLGSW  S  P  + +D ++QSPP T  +
Sbjct: 300  SHTLANGDFSTSKLTSGPVKLELPSLQYPETDLGSWGTSPPPLLETLDNFIQSPP-TAII 358

Query: 179  QSDVESPRKSGLLEALIYEAQMLGXXXXXXXXXXXXXXVLTPCEAVESVAANICEADYEL 358
            +S   SPR SGLL+AL+YEA+ L                +TP E  E  A NICE ++E 
Sbjct: 359  ES---SPRNSGLLDALLYEAKALSSAKNHSSEKSSNSSTVTPGELAECSAINICETEWED 415

Query: 359  FHDPISQ--HTA--------------------PISENLFGAAASVEPSSQLAPPDPSS-- 466
            + DP+S   HTA                    P ++   G     E  SQ   P+     
Sbjct: 416  YGDPLSPLGHTATSLFSECTPISASGSSLDEPPPTDTFTGCIVKTELVSQPWSPERDKET 475

Query: 467  ------WRPDFLLDSSWLVGNTNY---HSMFSNTIESLLNADLSAEQKQSPVGPSSKFPK 619
                   RPD LL S WL   + Y     + ++ I +LL  DLS++ KQ   G S+   +
Sbjct: 476  TTRVDITRPDALLASDWLGQGSGYIKDQVIMTDNIATLLGDDLSSDYKQMSAGASTS-NQ 534

Query: 620  VQQLDSSTWNIMPRVCPISELP 685
            V  L S  WN MP VC +SELP
Sbjct: 535  VWGLGSCAWNNMPAVCQMSELP 556


>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
            predicted protein [Populus trichocarpa]
          Length = 558

 Score =  141 bits (355), Expect = 3e-31
 Identities = 95/265 (35%), Positives = 131/265 (49%), Gaps = 37/265 (13%)
 Frame = +2

Query: 2    AHTLLNGNFSAPRPIPGSVELELPSLQYPDTDLGSWSVSHAPP---DPIDTYVQSPPGTM 172
            +HTL NG+FSA +P   +V+ ELPSLQY +TDLG W  S +P    + +DT++QSPP T 
Sbjct: 298  SHTLANGDFSASKPTSEAVKFELPSLQYAETDLGGWGASCSPSPLIESVDTFIQSPP-TG 356

Query: 173  PLQSDVESPRKSGLLEALIYEAQMLGXXXXXXXXXXXXXXVLTPCEAVESVAANICEADY 352
             ++S+  SPR SGLL+AL+YEA+ L                +TP +  +  A NI E ++
Sbjct: 357  TVESNFPSPRNSGLLDALLYEARTLSSAKNQSSDKSSNSSTITPGDNADCSALNISETEW 416

Query: 353  ELFHDPISQHTAPISENLFGAAASVEPSSQLAPPDPSS----------------W----- 469
            E + DPIS    P + +LF     +  S       P +                W     
Sbjct: 417  EDYGDPISPLGHPAA-SLFSECTPISASGSSLDESPPTETLTECNMKLEPVDHTWTADRE 475

Query: 470  ----------RPDFLLDSSWLVGNTNYHS---MFSNTIESLLNADLSAEQKQSPVGPSSK 610
                      RPD LLDS WL  ++ Y     + +  I +LL  DLS+E KQ   G S+ 
Sbjct: 476  KESYTQLDITRPDALLDSDWLEHDSGYGKDQVIMTEAIATLLGDDLSSEYKQMAAGASTD 535

Query: 611  FPKVQQLDSSTWNIMPRVCPISELP 685
                  L S +WN MP VC +SELP
Sbjct: 536  HG--WGLGSCSWNNMPAVCQMSELP 558


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score =  136 bits (343), Expect = 8e-30
 Identities = 95/266 (35%), Positives = 132/266 (49%), Gaps = 38/266 (14%)
 Frame = +2

Query: 2   AHTLLNGNFSAPRPIPGSVELELPSLQYPDTDLGSWSVSHAPP---DPIDTYVQSPP-GT 169
           +H LLNGNFSA +PI G V+LELPSLQY +TDLG W  S +PP   + +D ++QSPP GT
Sbjct: 195 SHALLNGNFSASKPISGPVKLELPSLQYLETDLGGWGTSSSPPPLLESVDAFIQSPPSGT 254

Query: 170 MPLQSDVESPRKSGLLEALIYEAQMLGXXXXXXXXXXXXXXVLTPCEAVESVAANICEAD 349
             +Q +  SPR SGLL+AL++EA+ +                +TP +  +S   N+CE +
Sbjct: 255 --VQLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADS-CLNMCETE 311

Query: 350 YELFHDPISQ--HTA--------------------PISENLFGAAASVEPSSQLAPPDPS 463
           +E + DPIS   H+                     P SE   G +   EP  Q+  PD  
Sbjct: 312 WEDYGDPISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCSVKAEPVDQVWTPDGE 371

Query: 464 S--------WRPDFLLDSSWL---VGNTNYHSMFSNTIESLLNADLSAEQKQSPVG-PSS 607
                     RPD LL S+W+    G     +M ++ + SL + D     K    G P+S
Sbjct: 372 KETSTQLDFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTS 431

Query: 608 KFPKVQQLDSSTWNIMPRVCPISELP 685
              +   L    WN +P VC +SELP
Sbjct: 432 N--QGWGLGCCAWNNLPPVCQMSELP 455


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
            gi|298205121|emb|CBI40642.3| unnamed protein product
            [Vitis vinifera]
          Length = 559

 Score =  135 bits (340), Expect = 2e-29
 Identities = 95/266 (35%), Positives = 131/266 (49%), Gaps = 38/266 (14%)
 Frame = +2

Query: 2    AHTLLNGNFSAPRPIPGSVELELPSLQYPDTDLGSWSVSHAPP---DPIDTYVQSPP-GT 169
            +H LLNGNFSA +PI G V+LELPSLQY +TDLG W  S +PP   + +D ++QSPP GT
Sbjct: 299  SHALLNGNFSASKPISGPVKLELPSLQYLETDLGGWGTSSSPPPLLESVDAFIQSPPSGT 358

Query: 170  MPLQSDVESPRKSGLLEALIYEAQMLGXXXXXXXXXXXXXXVLTPCEAVESVAANICEAD 349
              +Q +  SPR SGLL+AL++EA+ +                +TP +  +S   N+CE +
Sbjct: 359  --VQLECLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADS-CLNMCETE 415

Query: 350  YELFHDPISQ--HTA--------------------PISENLFGAAASVEPSSQLAPPDPS 463
            +E + DPIS   H+                     P SE   G     EP  Q+  PD  
Sbjct: 416  WEDYGDPISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCNVKAEPVDQVWTPDGE 475

Query: 464  S--------WRPDFLLDSSWL---VGNTNYHSMFSNTIESLLNADLSAEQKQSPVG-PSS 607
                      RPD LL S+W+    G     +M ++ + SL + D     K    G P+S
Sbjct: 476  KETSTQLDFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTS 535

Query: 608  KFPKVQQLDSSTWNIMPRVCPISELP 685
               +   L    WN +P VC +SELP
Sbjct: 536  N--QGWGLGCCAWNNLPPVCQMSELP 559


>ref|NP_001044592.1| Os01g0812000 [Oryza sativa Japonica Group]
            gi|122241089|sp|Q0JIC2.1|GAM1_ORYSJ RecName:
            Full=Transcription factor GAMYB; AltName: Full=OsGAMyb
            gi|18844771|dbj|BAB85242.1| transcription factor GAMyb
            [Oryza sativa Japonica Group]
            gi|113534123|dbj|BAF06506.1| Os01g0812000 [Oryza sativa
            Japonica Group] gi|125572392|gb|EAZ13907.1| hypothetical
            protein OsJ_03832 [Oryza sativa Japonica Group]
            gi|215736813|dbj|BAG95742.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 553

 Score =  108 bits (270), Expect = 2e-21
 Identities = 90/265 (33%), Positives = 125/265 (47%), Gaps = 39/265 (14%)
 Frame = +2

Query: 2    AHTLLNGNFSAPRPIPGSVELELPSLQYPDTDLGSW---SVSHA--PPDPIDTYVQSPPG 166
            +H  LNGNFSA RP  G +++ELPSLQ  ++D  SW   +V+ A  P + +D Y+QSP  
Sbjct: 299  SHAFLNGNFSASRPTSGPLKMELPSLQDTESDPNSWLKYTVAPALQPTELVDPYLQSPAA 358

Query: 167  TMPLQSDVESPRKSGLLEALIYEAQML-GXXXXXXXXXXXXXXVLTPCE-AVESVAANIC 340
            T  ++S+  SPR SGLLE LI+EAQ L                V TPC   V S   ++C
Sbjct: 359  TPSVKSECASPRNSGLLEELIHEAQTLRSGKNQQTSVISSSSSVGTPCNTTVLSPEFDMC 418

Query: 341  EADYELFH-DPISQHTAPISENLF--------GAAASVEPSSQLAP-------------- 451
            +  +E  H  P     AP S N F         A+  +   S+++P              
Sbjct: 419  QEYWEEQHPGPFLNDCAPFSGNSFTESTPPVSAASPDIFQLSKVSPAQSTSMGSGEQVMG 478

Query: 452  ---------PDPSSWRPDFLLDSSWLVGNTNYHSMFSNTIESLLNADLSAEQKQSPVGPS 604
                     P P ++RPD L       GNT   S+F+N I  LL  DLS + +   +G  
Sbjct: 479  PKYEPGDTSPHPENFRPDALFS-----GNTADPSVFNNAIAMLLGNDLSIDCR-PVLGDG 532

Query: 605  SKFPKVQQLDSSTWNIMPRVCPISE 679
              F      +SS+W+ MP  C +SE
Sbjct: 533  IMF------NSSSWSNMPHACEMSE 551


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