BLASTX nr result

ID: Dioscorea21_contig00021151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021151
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510805.1| conserved hypothetical protein [Ricinus comm...   201   4e-50
ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   199   1e-49
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|NP_001149363.1| XPG I-region family protein [Zea mays] gi|22...   187   8e-46
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   187   1e-45

>ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549920|gb|EEF51407.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score =  201 bits (512), Expect = 4e-50
 Identities = 97/118 (82%), Positives = 104/118 (88%)
 Frame = -2

Query: 356 KVLGLALGIPCLDGLEEAEAQCALLNAESLCDGCFSSDSDIFLFGARTVYRDVVLGDGGH 177
           K+LGLALGI CLD LEEAEAQCALLN+ESLCDGCFSSDSD+FLFGARTVYRD+ LGDGGH
Sbjct: 127 KILGLALGISCLDSLEEAEAQCALLNSESLCDGCFSSDSDVFLFGARTVYRDICLGDGGH 186

Query: 176 VSCYEMVDIESKLGLGRNSLITLALLLGGDYSQRVHGFGPDKALQVVKSMGDDNVLQQ 3
           V CYEM DIE KLG GRNSLITLALLLG DYSQ V G GP+ A Q+VKS+GD NVLQQ
Sbjct: 187 VVCYEMADIERKLGFGRNSLITLALLLGSDYSQGVRGLGPESACQIVKSVGDHNVLQQ 244


>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  199 bits (507), Expect = 1e-49
 Identities = 94/118 (79%), Positives = 108/118 (91%)
 Frame = -2

Query: 356 KVLGLALGIPCLDGLEEAEAQCALLNAESLCDGCFSSDSDIFLFGARTVYRDVVLGDGGH 177
           KVLGLALGIPCLDG+EEAEAQCALLN+ESLCDGCF+SDSD+FLFGARTVYRD+ LG+GG+
Sbjct: 126 KVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICLGEGGY 185

Query: 176 VSCYEMVDIESKLGLGRNSLITLALLLGGDYSQRVHGFGPDKALQVVKSMGDDNVLQQ 3
           V CYEM DIES LG GRNSLITLALLLG DYSQ VHGFGP+ A Q+VKS+G++ VL++
Sbjct: 186 VVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVVLKK 243


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  188 bits (477), Expect = 4e-46
 Identities = 90/118 (76%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 KVLGLALGIPCLDGLEEAEAQCALLNAESLCDGCFSSDSDIFLFGARTVYRDVVLGDGGH 177
           K +GLALGIPCLD +EEAEAQCALLN ESLCDGCFSSDSD+FLFGARTVYRD+ LG+ GH
Sbjct: 127 KDIGLALGIPCLDSIEEAEAQCALLNTESLCDGCFSSDSDVFLFGARTVYRDICLGE-GH 185

Query: 176 VSCYEMVDIESKLGLGRNSLITLALLLGGDYSQRVHGFGPDKALQVVKSMGDDNVLQQ 3
           V CYEM ++E KLG GRNSLITLAL+LG DYS  VHG GP+ A Q+VKS+GD NVLQ+
Sbjct: 186 VVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQIVKSIGDSNVLQK 243


>ref|NP_001149363.1| XPG I-region family protein [Zea mays] gi|224029981|gb|ACN34066.1|
           unknown [Zea mays] gi|413941545|gb|AFW74194.1| XPG
           I-region family protein [Zea mays]
          Length = 688

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/118 (75%), Positives = 103/118 (87%)
 Frame = -2

Query: 356 KVLGLALGIPCLDGLEEAEAQCALLNAESLCDGCFSSDSDIFLFGARTVYRDVVLGDGGH 177
           K LGLALGIPCLDG+EEAEAQCALLN  SLCDGCF+SDSD FLFGA+TVYRDV +G+GG+
Sbjct: 127 KHLGLALGIPCLDGMEEAEAQCALLNFSSLCDGCFTSDSDSFLFGAKTVYRDVFIGEGGY 186

Query: 176 VSCYEMVDIESKLGLGRNSLITLALLLGGDYSQRVHGFGPDKALQVVKSMGDDNVLQQ 3
           V CYEM DI++KLG GRNSLI+LA+LLG DYS  VHGFGP+ A ++VKS+GDD VL Q
Sbjct: 187 VICYEMEDIQNKLGFGRNSLISLAVLLGSDYSNGVHGFGPEAACRLVKSLGDDTVLGQ 244


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/118 (75%), Positives = 102/118 (86%)
 Frame = -2

Query: 356 KVLGLALGIPCLDGLEEAEAQCALLNAESLCDGCFSSDSDIFLFGARTVYRDVVLGDGGH 177
           KVLG+ALGI CL+G+EEAEAQCALLN ESLCDGCFSSDSDIFLFGARTVYRD+ LGDGG+
Sbjct: 128 KVLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSSDSDIFLFGARTVYRDICLGDGGY 187

Query: 176 VSCYEMVDIESKLGLGRNSLITLALLLGGDYSQRVHGFGPDKALQVVKSMGDDNVLQQ 3
           V CYEM DIE KLG GR+SLI L+LLLG DY Q VHG GP+ A Q+VKS+GD  +L++
Sbjct: 188 VVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESACQIVKSIGDKYILKK 245


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