BLASTX nr result

ID: Dioscorea21_contig00021146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021146
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   136   2e-30
ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   136   2e-30
ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...   135   5e-30
ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   134   1e-29
ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   131   7e-29

>ref|XP_004163452.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           UPL2-like [Cucumis sativus]
          Length = 3666

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/85 (72%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   PPKVKSFIDRVIKCPLQDIAIPLSGFRWEYNKGNFHHWRPLFLHFDTYFKTYXXXXXXXX 180
           PPK+K+FID+VI+CPL DIAIPLSGFRWEYNKGN+HHWRPLFLHFDTYFKTY        
Sbjct: 33  PPKIKAFIDKVIQCPLHDIAIPLSGFRWEYNKGNYHHWRPLFLHFDTYFKTYLSCRNDLL 92

Query: 181 XXXXXXEND-PFPKHSILQILRVMQ 252
                 E+D PFPKH+ILQILRVMQ
Sbjct: 93  LSDKILEDDSPFPKHAILQILRVMQ 117


>ref|XP_004152744.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Cucumis sativus]
          Length = 3656

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/85 (72%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   PPKVKSFIDRVIKCPLQDIAIPLSGFRWEYNKGNFHHWRPLFLHFDTYFKTYXXXXXXXX 180
           PPK+K+FID+VI+CPL DIAIPLSGFRWEYNKGN+HHWRPLFLHFDTYFKTY        
Sbjct: 23  PPKIKAFIDKVIQCPLHDIAIPLSGFRWEYNKGNYHHWRPLFLHFDTYFKTYLSCRNDLL 82

Query: 181 XXXXXXEND-PFPKHSILQILRVMQ 252
                 E+D PFPKH+ILQILRVMQ
Sbjct: 83  LSDKILEDDSPFPKHAILQILRVMQ 107


>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
           gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
           upl2, putative [Ricinus communis]
          Length = 3666

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/85 (72%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   PPKVKSFIDRVIKCPLQDIAIPLSGFRWEYNKGNFHHWRPLFLHFDTYFKTYXXXXXXXX 180
           PPK+K+FID+VI+ PLQDIAIPLSGFRWEY+KGNFHHWRPLFLHFDTYFKTY        
Sbjct: 16  PPKIKAFIDKVIQSPLQDIAIPLSGFRWEYSKGNFHHWRPLFLHFDTYFKTYLSSRNDLL 75

Query: 181 XXXXXXEND-PFPKHSILQILRVMQ 252
                 END PFPKH++LQILRVMQ
Sbjct: 76  LSDNISENDCPFPKHAVLQILRVMQ 100


>ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3659

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/84 (69%), Positives = 67/84 (79%)
 Frame = +1

Query: 1   PPKVKSFIDRVIKCPLQDIAIPLSGFRWEYNKGNFHHWRPLFLHFDTYFKTYXXXXXXXX 180
           PPK+K+FI+++I+CPLQDIAIPLSGFRWEYNKGNFHHWRPL LHFDTYFKTY        
Sbjct: 33  PPKIKAFIEKIIQCPLQDIAIPLSGFRWEYNKGNFHHWRPLLLHFDTYFKTYLSCRNDLT 92

Query: 181 XXXXXXENDPFPKHSILQILRVMQ 252
                 ++ P PKH+ILQILRVMQ
Sbjct: 93  LLDNLEDDSPLPKHAILQILRVMQ 116


>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   PPKVKSFIDRVIKCPLQDIAIPLSGFRWEYNKGNFHHWRPLFLHFDTYFKTYXXXXXXXX 180
           PPK+K+FID+VI+ PLQDIAIPLSGF WEY+KGNFHHWRPLFLHFDTYFKTY        
Sbjct: 93  PPKIKAFIDKVIQSPLQDIAIPLSGFHWEYSKGNFHHWRPLFLHFDTYFKTYLSCRNDLL 152

Query: 181 XXXXXXEND-PFPKHSILQILRVMQ 252
                 E+D PFPKH++LQILRVMQ
Sbjct: 153 LSDNTLEDDSPFPKHAVLQILRVMQ 177


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