BLASTX nr result

ID: Dioscorea21_contig00021136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021136
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago ...   108   9e-22
gb|EAY82754.1| hypothetical protein OsI_37962 [Oryza sativa Indi...    97   3e-18
ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana] ...    97   3e-18
ref|NP_178432.1| uncharacterized protein [Arabidopsis thaliana] ...    95   1e-17
ref|NP_001132549.1| uncharacterized protein LOC100194014 [Zea ma...    92   6e-17

>ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago truncatula]
           gi|355508824|gb|AES89966.1| hypothetical protein
           MTR_4g082550 [Medicago truncatula]
          Length = 339

 Score =  108 bits (270), Expect = 9e-22
 Identities = 62/126 (49%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
 Frame = +3

Query: 144 IIVVLESTWGFPPFHRSFHLLTGMRCAALILNLSFSFLLGIILWAFNSSVGF---NYEIR 314
           +I ++E+T+G  P  RS HL+ GM+         F+ L GI+LW+     GF        
Sbjct: 209 VIAIVENTYGIQPLRRSAHLMNGMKYTGASCFFFFASLEGIMLWS-----GFLLARVVSD 263

Query: 315 SQGVRD---IVRTVLGSAVSTVILLYLIVTNTVLYMYCKALHGELEDEIVREFAWDYVCL 485
           S   RD   +V+ VL SAV TV++LY    NTVLYMYCKALHGEL +EIV EFAW YV L
Sbjct: 264 SGSWRDWAFMVQIVLTSAVMTVLMLYNAAANTVLYMYCKALHGELAEEIVEEFAWQYVSL 323

Query: 486 PFDDHK 503
           PFDD K
Sbjct: 324 PFDDGK 329


>gb|EAY82754.1| hypothetical protein OsI_37962 [Oryza sativa Indica Group]
          Length = 322

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 3/120 (2%)
 Frame = +3

Query: 153 VLESTWGFPPFHRSFHLLTGMRCAALILNLSFSFLLGIILWAFNSSVGFNYEIRS--QGV 326
           V+ES+ G  P  +S  LL G R AAL   L F   +G+ LW F       Y+  +   G+
Sbjct: 191 VVESSAGVSPLRQSCRLLNGARLAALSAFLVFGAGIGVTLWGFGGVAAETYDASAGWAGM 250

Query: 327 RDIV-RTVLGSAVSTVILLYLIVTNTVLYMYCKALHGELEDEIVREFAWDYVCLPFDDHK 503
             +V + V+G+AV  V++LY +VTN VLYM+C+ALHGEL  EI  EFA  YV LPFD+ K
Sbjct: 251 APVVVKAVVGTAVLVVLMLYGMVTNVVLYMHCRALHGELTGEIYNEFANSYVFLPFDEGK 310


>ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6671937|gb|AAF23197.1|AC016795_10 unknown protein
           [Arabidopsis thaliana] gi|332641580|gb|AEE75101.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 348

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
 Frame = +3

Query: 144 IIVVLESTWGFPPFHRSFHLLTGMRCAALILNLSFSFLLGIILWAFNSSVGFNYEIRSQG 323
           ++VV+ES WG  P  RS  L+ GM+CA+L +   F+    I++W    +          G
Sbjct: 211 VVVVVESAWGITPLKRSKRLVKGMKCASLSIIFFFASTESILVWISTLAAYAQLNDNENG 270

Query: 324 VRD------IVRTVLGSAVSTVILLYLIVTNTVLYMYCKALHGELEDEIVREFAWDYVCL 485
            +       +V+ V+ SA  T++ LY +   TV+YMYCKA+HGEL  EI  EFA +YV L
Sbjct: 271 GKSWTDAFFVVQIVITSAFLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSL 330

Query: 486 PFDDHK 503
           PFDD K
Sbjct: 331 PFDDGK 336


>ref|NP_178432.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4335772|gb|AAD17449.1| unknown protein [Arabidopsis
           thaliana] gi|330250594|gb|AEC05688.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 385

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
 Frame = +3

Query: 144 IIVVLESTWGFPPFHRSFHLLTGMRCAALILNLSFSFLLGIILWAFNSSVGFNYEIRSQG 323
           ++VV+ES WG  P   S  L+ GM+CA+L +   F+    I++W    +          G
Sbjct: 248 VVVVVESAWGITPLKTSKRLVKGMKCASLSIIFFFASTESILVWISTLAAYALLNDNENG 307

Query: 324 VRD------IVRTVLGSAVSTVILLYLIVTNTVLYMYCKALHGELEDEIVREFAWDYVCL 485
            +        V+  + SA+ T+++LY +V  TV+YMYCKA+HGEL  EI  EFA +YV L
Sbjct: 308 GKSWKGSFFFVQNWITSALLTLLMLYNLVATTVMYMYCKAVHGELVGEIAEEFAREYVSL 367

Query: 486 PFDDHK 503
           PFDD K
Sbjct: 368 PFDDGK 373


>ref|NP_001132549.1| uncharacterized protein LOC100194014 [Zea mays]
           gi|194694702|gb|ACF81435.1| unknown [Zea mays]
           gi|413916337|gb|AFW56269.1| hypothetical protein
           ZEAMMB73_024405 [Zea mays]
          Length = 313

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
 Frame = +3

Query: 153 VLESTWGFPPFHRSFHLLTGMRCAALILNLSFSFLLGIILWAFNSSVGFNYEIRS--QGV 326
           V+ES  GF P  RS  LL+  R AAL   L F+  +G+ LW F       Y+  +   G+
Sbjct: 182 VVESATGFTPLRRSCQLLSTARLAALSSFLVFAAGIGVTLWGFGGVAAERYDAGAGWAGM 241

Query: 327 RDIV-RTVLGSAVSTVILLYLIVTNTVLYMYCKALHGELEDEIVREFAWDYVCLPFDDHK 503
             +V + V G+A+  V++LY +V N VLYM+C+A+HGEL  EI  EFA  YV LP+DD K
Sbjct: 242 APVVVKAVAGTALLAVMMLYGMVANVVLYMHCRAMHGELTGEIYNEFANMYVFLPYDDGK 301


Top