BLASTX nr result

ID: Dioscorea21_contig00021132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021132
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ21486.1| hypothetical protein OsJ_05106 [Oryza sativa Japo...   116   1e-43
ref|NP_001045670.1| Os02g0114700 [Oryza sativa Japonica Group] g...   116   1e-43
gb|EAY84191.1| hypothetical protein OsI_05569 [Oryza sativa Indi...   116   1e-43
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   116   3e-43
ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu...   116   3e-43

>gb|EAZ21486.1| hypothetical protein OsJ_05106 [Oryza sativa Japonica Group]
          Length = 595

 Score =  116 bits (290), Expect(2) = 1e-43
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +1

Query: 391 WVLKCHACNKVTQEVGRIFCPKCGNGGTLRKVSVTIGENGMVLAARRQRFILRGTKFSLP 570
           WVL+CHAC KVTQE+G+IFCPKCGNGGTLRKVSVT+GENG+ +A+RR R  LRGTKFSLP
Sbjct: 453 WVLRCHACYKVTQEIGKIFCPKCGNGGTLRKVSVTVGENGITMASRRPRVTLRGTKFSLP 512

Query: 571 LPQ 579
           +PQ
Sbjct: 513 MPQ 515



 Score = 86.3 bits (212), Expect(2) = 1e-43
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +2

Query: 5   SELDELELSKQTEGSIENYAADDGSVEAAVVDEVSIGPDADEANTQASVEDASSEQSWMI 184
           S+ D  +      G +E     D  +E   +D + I  D++E    +  +D SSEQSW +
Sbjct: 354 SQSDNKDNGVGNVGDVEETGGTDACIEE--LDNLDIKSDSEEGVDSSLADDGSSEQSWAL 411

Query: 185 RSLSDSSVACVTSDYAMQNVILQIGLRLLAP 277
           RSLS+S+VAC+TSDYAMQNVILQIGLRLLAP
Sbjct: 412 RSLSESTVACITSDYAMQNVILQIGLRLLAP 442


>ref|NP_001045670.1| Os02g0114700 [Oryza sativa Japonica Group]
           gi|41052589|dbj|BAD07931.1| putative nin one binding
           protein [Oryza sativa Japonica Group]
           gi|41052784|dbj|BAD07653.1| putative nin one binding
           protein [Oryza sativa Japonica Group]
           gi|113535201|dbj|BAF07584.1| Os02g0114700 [Oryza sativa
           Japonica Group]
          Length = 576

 Score =  116 bits (290), Expect(2) = 1e-43
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +1

Query: 391 WVLKCHACNKVTQEVGRIFCPKCGNGGTLRKVSVTIGENGMVLAARRQRFILRGTKFSLP 570
           WVL+CHAC KVTQE+G+IFCPKCGNGGTLRKVSVT+GENG+ +A+RR R  LRGTKFSLP
Sbjct: 434 WVLRCHACYKVTQEIGKIFCPKCGNGGTLRKVSVTVGENGITMASRRPRVTLRGTKFSLP 493

Query: 571 LPQ 579
           +PQ
Sbjct: 494 MPQ 496



 Score = 86.3 bits (212), Expect(2) = 1e-43
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +2

Query: 5   SELDELELSKQTEGSIENYAADDGSVEAAVVDEVSIGPDADEANTQASVEDASSEQSWMI 184
           S+ D  +      G +E     D  +E   +D + I  D++E    +  +D SSEQSW +
Sbjct: 335 SQSDNKDNGVGNVGDVEETGGTDACIEE--LDNLDIKSDSEEGVDSSLADDGSSEQSWAL 392

Query: 185 RSLSDSSVACVTSDYAMQNVILQIGLRLLAP 277
           RSLS+S+VAC+TSDYAMQNVILQIGLRLLAP
Sbjct: 393 RSLSESTVACITSDYAMQNVILQIGLRLLAP 423


>gb|EAY84191.1| hypothetical protein OsI_05569 [Oryza sativa Indica Group]
          Length = 576

 Score =  116 bits (290), Expect(2) = 1e-43
 Identities = 50/63 (79%), Positives = 58/63 (92%)
 Frame = +1

Query: 391 WVLKCHACNKVTQEVGRIFCPKCGNGGTLRKVSVTIGENGMVLAARRQRFILRGTKFSLP 570
           WVL+CHAC KVTQE+G+IFCPKCGNGGTLRKVSVT+GENG+ +A+RR R  LRGTKFSLP
Sbjct: 434 WVLRCHACYKVTQEIGKIFCPKCGNGGTLRKVSVTVGENGITMASRRPRVTLRGTKFSLP 493

Query: 571 LPQ 579
           +PQ
Sbjct: 494 MPQ 496



 Score = 86.3 bits (212), Expect(2) = 1e-43
 Identities = 45/91 (49%), Positives = 59/91 (64%)
 Frame = +2

Query: 5   SELDELELSKQTEGSIENYAADDGSVEAAVVDEVSIGPDADEANTQASVEDASSEQSWMI 184
           S+ D  +      G +E     D  +E   +D + I  D++E    +  +D SSEQSW +
Sbjct: 335 SQSDNKDNGVGNVGDVEETGGTDACIEE--LDNLDIKSDSEEGVDSSLADDGSSEQSWAL 392

Query: 185 RSLSDSSVACVTSDYAMQNVILQIGLRLLAP 277
           RSLS+S+VAC+TSDYAMQNVILQIGLRLLAP
Sbjct: 393 RSLSESTVACITSDYAMQNVILQIGLRLLAP 423


>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
           [Cucumis sativus]
          Length = 617

 Score =  116 bits (290), Expect(2) = 3e-43
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +1

Query: 391 WVLKCHACNKVTQEVGRIFCPKCGNGGTLRKVSVTIGENGMVLAARRQRFILRGTKFSLP 570
           W+LKCHAC  VT E+GRIFCPKCGNGGTLRKV+VT+GENG+VLAAR+ R  LRGTKFSLP
Sbjct: 472 WILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLP 531

Query: 571 LPQ 579
           LPQ
Sbjct: 532 LPQ 534



 Score = 84.7 bits (208), Expect(2) = 3e-43
 Identities = 49/88 (55%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = +2

Query: 23  ELSKQTEGSIENYAADDGSVEAAVVDEVSIGPDADEANTQ---ASVEDASSEQSWMIRSL 193
           E S ++EG  EN  A +G+ +A   DE+    DA + N     ++V+D SS+QSWM+RSL
Sbjct: 377 EGSDESEG--ENAVAVEGTKDAEK-DEMEHMEDASQTNESVDMSNVDDVSSDQSWMLRSL 433

Query: 194 SDSSVACVTSDYAMQNVILQIGLRLLAP 277
           S+SSVACVT DYAMQNV+LQ+GLRLLAP
Sbjct: 434 SESSVACVTGDYAMQNVLLQMGLRLLAP 461


>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
          Length = 617

 Score =  116 bits (290), Expect(2) = 3e-43
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +1

Query: 391 WVLKCHACNKVTQEVGRIFCPKCGNGGTLRKVSVTIGENGMVLAARRQRFILRGTKFSLP 570
           W+LKCHAC  VT E+GRIFCPKCGNGGTLRKV+VT+GENG+VLAAR+ R  LRGTKFSLP
Sbjct: 472 WILKCHACYNVTAEIGRIFCPKCGNGGTLRKVAVTVGENGVVLAARKPRITLRGTKFSLP 531

Query: 571 LPQ 579
           LPQ
Sbjct: 532 LPQ 534



 Score = 84.7 bits (208), Expect(2) = 3e-43
 Identities = 49/88 (55%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
 Frame = +2

Query: 23  ELSKQTEGSIENYAADDGSVEAAVVDEVSIGPDADEANTQ---ASVEDASSEQSWMIRSL 193
           E S ++EG  EN  A +G+ +A   DE+    DA + N     ++V+D SS+QSWM+RSL
Sbjct: 377 EGSDESEG--ENAVAVEGTKDAEK-DEMEHMEDASQTNESVDMSNVDDVSSDQSWMLRSL 433

Query: 194 SDSSVACVTSDYAMQNVILQIGLRLLAP 277
           S+SSVACVT DYAMQNV+LQ+GLRLLAP
Sbjct: 434 SESSVACVTGDYAMQNVLLQMGLRLLAP 461


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