BLASTX nr result
ID: Dioscorea21_contig00021127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00021127
(1111 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group] g... 472 e-131
dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica... 472 e-131
gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group... 471 e-130
ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-... 457 e-126
emb|CBI15109.3| unnamed protein product [Vitis vinifera] 457 e-126
>ref|NP_001049369.1| Os03g0214100 [Oryza sativa Japonica Group]
gi|108706832|gb|ABF94627.1| replication factor-a protein
1 containing protein, expressed [Oryza sativa Japonica
Group] gi|113547840|dbj|BAF11283.1| Os03g0214100 [Oryza
sativa Japonica Group] gi|125585388|gb|EAZ26052.1|
hypothetical protein OsJ_09906 [Oryza sativa Japonica
Group]
Length = 630
Score = 472 bits (1215), Expect = e-131
Identities = 227/310 (73%), Positives = 266/310 (85%)
Frame = -3
Query: 1109 ELVDVIAVVQNVSSTLSIRRKSNNDTIPKRDITIADDSNKTVIVSLWNELATDIGQQLLD 930
ELVDVI VVQ+VS TLS+RRK +N+TIPKRDI +ADDS+KTV +SLWN+LAT GQ+LLD
Sbjct: 319 ELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQELLD 378
Query: 929 TVDSAPVVAIKSLRVGDFQGXXXXXXXXXXXLINPDLPEAKKLRAWFDSEGKGTSMASVG 750
VDSAP++AIKSL+V DFQG ++NPDLPEA++LRAW+DSEGKGTSMAS+G
Sbjct: 379 MVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSMASIG 438
Query: 749 SGFSASSKNGAKSMYSDRVLLSHITNDQTLGQDKPVFFSIKGYISFIKSDQTMSYRACKT 570
S AS GA+SMYSDRV LSHIT+D LGQDKPVFFS+ YIS IK DQTM YRACKT
Sbjct: 439 SDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYRACKT 498
Query: 569 CNKKVTEAIGSGYWCEACQKNDDECSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGCTAD 390
CNKKVTEAIGSGYWCE CQKND ECSLRYIMV+KVSD +GEAWLS+FN+QAE+I+GC+AD
Sbjct: 499 CNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSAD 558
Query: 389 ELNRIKSEEGDDKYQLKLKEATWVPHLFRVSVAQTEYMNEKRQRITVKAHAPLDCSAESR 210
EL+RI+ EEGDD Y LKLKEATWVPHLFRVSV Q EYMNEKRQRITV++ AP+D +AE++
Sbjct: 559 ELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAK 618
Query: 209 YLLEEIAKMS 180
Y+LEEIAK++
Sbjct: 619 YMLEEIAKLT 628
>dbj|BAC77529.1| replication protein A 70b [Oryza sativa Japonica Group]
Length = 630
Score = 472 bits (1214), Expect = e-131
Identities = 227/310 (73%), Positives = 266/310 (85%)
Frame = -3
Query: 1109 ELVDVIAVVQNVSSTLSIRRKSNNDTIPKRDITIADDSNKTVIVSLWNELATDIGQQLLD 930
ELVDVI VVQ+VS TLS+RRK +N+TIPKRDI +ADDS+KTV +SLWN+LAT GQ+LLD
Sbjct: 319 ELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQELLD 378
Query: 929 TVDSAPVVAIKSLRVGDFQGXXXXXXXXXXXLINPDLPEAKKLRAWFDSEGKGTSMASVG 750
VDSAP++AIKSL+V DFQG ++NPDLPEA++LRAW+DSEGKGTSMAS+G
Sbjct: 379 MVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVLNPDLPEAEQLRAWYDSEGKGTSMASIG 438
Query: 749 SGFSASSKNGAKSMYSDRVLLSHITNDQTLGQDKPVFFSIKGYISFIKSDQTMSYRACKT 570
S AS GA+SMYSDRV LSHIT+D LGQDKPVFFS+ YIS IK DQTM YRACKT
Sbjct: 439 SDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYRACKT 498
Query: 569 CNKKVTEAIGSGYWCEACQKNDDECSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGCTAD 390
CNKKVTEAIGSGYWCE CQKND ECSLRYIMV+KVSD +GEAWLS+FN+QAE+I+GC+AD
Sbjct: 499 CNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSAD 558
Query: 389 ELNRIKSEEGDDKYQLKLKEATWVPHLFRVSVAQTEYMNEKRQRITVKAHAPLDCSAESR 210
EL+RI+ EEGDD Y LKLKEATWVPHLFRVSV Q EYMNEKRQRITV++ AP+D +AE++
Sbjct: 559 ELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAK 618
Query: 209 YLLEEIAKMS 180
Y+LEEIAK++
Sbjct: 619 YMLEEIAKLT 628
>gb|AAB71836.1| replication protein A1 [Oryza sativa Indica Group]
gi|125542895|gb|EAY89034.1| hypothetical protein
OsI_10518 [Oryza sativa Indica Group]
Length = 630
Score = 471 bits (1212), Expect = e-130
Identities = 226/310 (72%), Positives = 266/310 (85%)
Frame = -3
Query: 1109 ELVDVIAVVQNVSSTLSIRRKSNNDTIPKRDITIADDSNKTVIVSLWNELATDIGQQLLD 930
ELVDVI VVQ+VS TLS+RRK +N+TIPKRDI +ADDS+KTV +SLWN+LAT GQ+LLD
Sbjct: 319 ELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTISLWNDLATTTGQELLD 378
Query: 929 TVDSAPVVAIKSLRVGDFQGXXXXXXXXXXXLINPDLPEAKKLRAWFDSEGKGTSMASVG 750
VDSAP++AIKSL+V DFQG ++NPDLPEA++LRAW+DSEGKGTSMAS+G
Sbjct: 379 MVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLRAWYDSEGKGTSMASIG 438
Query: 749 SGFSASSKNGAKSMYSDRVLLSHITNDQTLGQDKPVFFSIKGYISFIKSDQTMSYRACKT 570
S AS GA+SMYSDRV LSHIT+D LGQDKPVFFS+ YIS IK DQTM YRACKT
Sbjct: 439 SDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISLIKPDQTMWYRACKT 498
Query: 569 CNKKVTEAIGSGYWCEACQKNDDECSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGCTAD 390
CNKKVTEA+GSGYWCE CQKND ECSLRYIMV+KVSD +GEAWLS+FN+QAE+I+GC+AD
Sbjct: 499 CNKKVTEAMGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSAD 558
Query: 389 ELNRIKSEEGDDKYQLKLKEATWVPHLFRVSVAQTEYMNEKRQRITVKAHAPLDCSAESR 210
EL+RI+ EEGDD Y LKLKEATWVPHLFRVSV Q EYMNEKRQRITV++ AP+D +AE++
Sbjct: 559 ELDRIRKEEGDDSYLLKLKEATWVPHLFRVSVTQNEYMNEKRQRITVRSEAPVDHAAEAK 618
Query: 209 YLLEEIAKMS 180
Y+LEEIAK++
Sbjct: 619 YMLEEIAKLT 628
>ref|XP_003561889.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
[Brachypodium distachyon]
Length = 635
Score = 457 bits (1177), Expect = e-126
Identities = 220/312 (70%), Positives = 263/312 (84%)
Frame = -3
Query: 1109 ELVDVIAVVQNVSSTLSIRRKSNNDTIPKRDITIADDSNKTVIVSLWNELATDIGQQLLD 930
ELVD+I VVQ+VS TLSIRRK +N+TIPKRDI +ADDSNKTV V+LWN+LAT IG+QLLD
Sbjct: 324 ELVDIIGVVQSVSPTLSIRRKIDNETIPKRDIVVADDSNKTVTVTLWNDLATTIGEQLLD 383
Query: 929 TVDSAPVVAIKSLRVGDFQGXXXXXXXXXXXLINPDLPEAKKLRAWFDSEGKGTSMASVG 750
VDSAPV+A+KSL+V DFQG +INP+LPEA KLR W++SEGKGTSMASVG
Sbjct: 384 MVDSAPVIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEADKLRTWYESEGKGTSMASVG 443
Query: 749 SGFSASSKNGAKSMYSDRVLLSHITNDQTLGQDKPVFFSIKGYISFIKSDQTMSYRACKT 570
+ AS G++SMYSDRV LSHIT+D LGQDKPVFFS+ YIS IK DQTM YRACKT
Sbjct: 444 ADMGASRTGGSRSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYISHIKPDQTMWYRACKT 503
Query: 569 CNKKVTEAIGSGYWCEACQKNDDECSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGCTAD 390
CNKKVTEA+GSGYWCE CQKN +EC LRYIM +KVSD +GEAWLS+FN+QAE+I+GC+AD
Sbjct: 504 CNKKVTEAVGSGYWCEGCQKNYEECMLRYIMAIKVSDPTGEAWLSLFNDQAERIVGCSAD 563
Query: 389 ELNRIKSEEGDDKYQLKLKEATWVPHLFRVSVAQTEYMNEKRQRITVKAHAPLDCSAESR 210
EL+R + EEGDD + L+LKEATWVPHLFRVSV+Q EYM EKRQRITV++ +P+D +AE+R
Sbjct: 564 ELDRSRKEEGDDSFLLRLKEATWVPHLFRVSVSQNEYMGEKRQRITVRSESPVDYAAEAR 623
Query: 209 YLLEEIAKMSLS 174
+LLEEIAK++ S
Sbjct: 624 FLLEEIAKLTSS 635
>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 457 bits (1177), Expect = e-126
Identities = 224/313 (71%), Positives = 263/313 (84%), Gaps = 1/313 (0%)
Frame = -3
Query: 1109 ELVDVIAVVQNVSSTLSIRRKSNNDTIPKRDITIADDSNKTVIVSLWNELATDIGQQLLD 930
ELVDVI VVQ+VS T+SIRRKSNND +PKRDITIAD + KTV+VSLWN+ AT++GQ+LLD
Sbjct: 289 ELVDVIGVVQSVSPTMSIRRKSNNDIVPKRDITIADKTKKTVVVSLWNDHATNVGQELLD 348
Query: 929 TVDSAPVVAIKSLRVGDFQGXXXXXXXXXXXLINPDLPEAKKLRAWFDSEGKGTSMASVG 750
D P+VAIKSL+VGDFQG L+NPD PE+KKLR+W+DSEGKG SMAS+G
Sbjct: 349 NADKFPIVAIKSLKVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSWYDSEGKGASMASIG 408
Query: 749 SGFSASSKNGAKSMYSDRVLLSHITNDQTLGQDKPVFFSIKGYISFIKSDQTMSYRACKT 570
S S SSK G KSMY DRV LSH+T++ +LG+DKP FFSI+ YISFIK DQTM YRACKT
Sbjct: 409 SDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDKPSFFSIRAYISFIKPDQTMWYRACKT 468
Query: 569 CNKKVTEAIGSGYWCEACQKNDDECSLRYIMVVKVSDHSGEAWLSVFNEQAEKIIGCTAD 390
CNKKVT+AIGSGYWCE CQKNDDECSLRYIMVVKVSD SGEAWLS+FNEQAE++ GC+AD
Sbjct: 469 CNKKVTDAIGSGYWCEGCQKNDDECSLRYIMVVKVSDASGEAWLSLFNEQAERMFGCSAD 528
Query: 389 ELNRIKSEEGDDK-YQLKLKEATWVPHLFRVSVAQTEYMNEKRQRITVKAHAPLDCSAES 213
EL+++KS+EG++ +Q KLKEA WVPHLFR+SVAQ EYMNEKRQRIT +A P+D +AES
Sbjct: 529 ELDKLKSQEGEENLFQQKLKEAIWVPHLFRISVAQHEYMNEKRQRITARAVVPVDFAAES 588
Query: 212 RYLLEEIAKMSLS 174
R LLEEI+KM S
Sbjct: 589 RLLLEEISKMKTS 601