BLASTX nr result

ID: Dioscorea21_contig00021113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021113
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...    99   3e-19
gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]      99   3e-19
ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...    98   8e-19
emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]    98   8e-19
ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group] g...    98   8e-19

>ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
          Length = 275

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/93 (58%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182
           +LRMYATC                SGLLGHTELRLH+PPSIA A               D
Sbjct: 76  TLRMYATCQQLQAQAQARAMAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 133

Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281
           REFDDLDY+TLRALDSDN+P  PSMSEE+INAL
Sbjct: 134 REFDDLDYETLRALDSDNAPTTPSMSEEQINAL 166


>gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
          Length = 275

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/93 (58%), Positives = 59/93 (63%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182
           +LRMYATC                SGLLGHTELRLH+PPSIA A               D
Sbjct: 76  TLRMYATCQQLQAQAQARAMAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 133

Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281
           REFDDLDY+TLRALDSDN+P  PSMSEE+INAL
Sbjct: 134 REFDDLDYETLRALDSDNAPTTPSMSEEQINAL 166


>ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera]
           gi|296086209|emb|CBI31650.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/93 (58%), Positives = 58/93 (62%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182
           +LRMYATC                SGLLGHTELRLH+PPSIA A               D
Sbjct: 75  TLRMYATCQQLQAQAQAHAAAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 132

Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281
           REFDDLDY+TLRALDS+N P  PSMSEEEINAL
Sbjct: 133 REFDDLDYETLRALDSENVPTTPSMSEEEINAL 165


>emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera]
          Length = 262

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 54/93 (58%), Positives = 58/93 (62%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182
           +LRMYATC                SGLLGHTELRLH+PPSIA A               D
Sbjct: 75  TLRMYATCQQLQAHAQAHAAAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 132

Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281
           REFDDLDY+TLRALDS+N P  PSMSEEEINAL
Sbjct: 133 REFDDLDYETLRALDSENVPTTPSMSEEEINAL 165


>ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group]
           gi|108707430|gb|ABF95225.1| zinc finger family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|215765669|dbj|BAG87366.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255674397|dbj|BAF11610.2| Os03g0272300 [Oryza sativa
           Japonica Group]
          Length = 233

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/93 (56%), Positives = 57/93 (61%)
 Frame = +3

Query: 3   SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182
           SLRMYATC                +G LGHTELR+HVPP+IA A               D
Sbjct: 29  SLRMYATCQQLQAQAQAHAAAA--NGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLD 86

Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281
           REFDDLDYD LRALD+DNSP  PSMSEEEINAL
Sbjct: 87  REFDDLDYDALRALDADNSPHAPSMSEEEINAL 119


Top