BLASTX nr result
ID: Dioscorea21_contig00021113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021113 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1... 99 3e-19 gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo] 99 3e-19 ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1... 98 8e-19 emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] 98 8e-19 ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group] g... 98 8e-19 >ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus] Length = 275 Score = 99.4 bits (246), Expect = 3e-19 Identities = 54/93 (58%), Positives = 59/93 (63%) Frame = +3 Query: 3 SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182 +LRMYATC SGLLGHTELRLH+PPSIA A D Sbjct: 76 TLRMYATCQQLQAQAQARAMAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 133 Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281 REFDDLDY+TLRALDSDN+P PSMSEE+INAL Sbjct: 134 REFDDLDYETLRALDSDNAPTTPSMSEEQINAL 166 >gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo] Length = 275 Score = 99.4 bits (246), Expect = 3e-19 Identities = 54/93 (58%), Positives = 59/93 (63%) Frame = +3 Query: 3 SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182 +LRMYATC SGLLGHTELRLH+PPSIA A D Sbjct: 76 TLRMYATCQQLQAQAQARAMAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 133 Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281 REFDDLDY+TLRALDSDN+P PSMSEE+INAL Sbjct: 134 REFDDLDYETLRALDSDNAPTTPSMSEEQINAL 166 >ref|XP_002283148.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Vitis vinifera] gi|296086209|emb|CBI31650.3| unnamed protein product [Vitis vinifera] Length = 275 Score = 97.8 bits (242), Expect = 8e-19 Identities = 54/93 (58%), Positives = 58/93 (62%) Frame = +3 Query: 3 SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182 +LRMYATC SGLLGHTELRLH+PPSIA A D Sbjct: 75 TLRMYATCQQLQAQAQAHAAAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 132 Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281 REFDDLDY+TLRALDS+N P PSMSEEEINAL Sbjct: 133 REFDDLDYETLRALDSENVPTTPSMSEEEINAL 165 >emb|CAN60068.1| hypothetical protein VITISV_012400 [Vitis vinifera] Length = 262 Score = 97.8 bits (242), Expect = 8e-19 Identities = 54/93 (58%), Positives = 58/93 (62%) Frame = +3 Query: 3 SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182 +LRMYATC SGLLGHTELRLH+PPSIA A D Sbjct: 75 TLRMYATCQQLQAHAQAHAAAA--SGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLD 132 Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281 REFDDLDY+TLRALDS+N P PSMSEEEINAL Sbjct: 133 REFDDLDYETLRALDSENVPTTPSMSEEEINAL 165 >ref|NP_001049696.2| Os03g0272300 [Oryza sativa Japonica Group] gi|108707430|gb|ABF95225.1| zinc finger family protein, putative, expressed [Oryza sativa Japonica Group] gi|215765669|dbj|BAG87366.1| unnamed protein product [Oryza sativa Japonica Group] gi|255674397|dbj|BAF11610.2| Os03g0272300 [Oryza sativa Japonica Group] Length = 233 Score = 97.8 bits (242), Expect = 8e-19 Identities = 53/93 (56%), Positives = 57/93 (61%) Frame = +3 Query: 3 SLRMYATCXXXXXXXXXXXXXXXXSGLLGHTELRLHVPPSIAFAPXXXXXXXXXXXXXXD 182 SLRMYATC +G LGHTELR+HVPP+IA A D Sbjct: 29 SLRMYATCQQLQAQAQAHAAAA--NGFLGHTELRVHVPPTIALATRGRLQSLRLQLALLD 86 Query: 183 REFDDLDYDTLRALDSDNSPEVPSMSEEEINAL 281 REFDDLDYD LRALD+DNSP PSMSEEEINAL Sbjct: 87 REFDDLDYDALRALDADNSPHAPSMSEEEINAL 119