BLASTX nr result

ID: Dioscorea21_contig00021108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021108
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314602.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|NP_001044108.1| Os01g0723600 [Oryza sativa Japonica Group] g...   114   6e-24
ref|XP_002456270.1| hypothetical protein SORBIDRAFT_03g033270 [S...   114   8e-24
ref|XP_001765886.1| predicted protein [Physcomitrella patens sub...   113   1e-23
ref|XP_002272590.2| PREDICTED: ribose-phosphate pyrophosphokinas...   113   2e-23

>ref|XP_002314602.1| predicted protein [Populus trichocarpa] gi|222863642|gb|EEF00773.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  115 bits (288), Expect = 4e-24
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = -3

Query: 212 PRKSVCLFYCEEMRELAEQVALQSDAIQLRSINWRTFEDGFPNLFIPNAHGIRGQHVAFL 33
           P K VCLFYC E + LA+++A ++D+I+LRSI+WRTF+DGFPNLFIPNA GIRGQHVAFL
Sbjct: 11  PSKKVCLFYCAETKPLAQRIAAETDSIELRSISWRTFDDGFPNLFIPNAQGIRGQHVAFL 70

Query: 32  ASLSSPKVLF 3
           AS SSPKV+F
Sbjct: 71  ASFSSPKVIF 80


>ref|NP_001044108.1| Os01g0723600 [Oryza sativa Japonica Group]
           gi|68571765|sp|Q8S2E5.1|KPRS3_ORYSJ RecName:
           Full=Ribose-phosphate pyrophosphokinase 3,
           chloroplastic; AltName: Full=Phosphoribosyl
           pyrophosphate synthase 3; Flags: Precursor
           gi|20160549|dbj|BAB89498.1| putative phosphoribosyl
           pyrophosphate synthase [Oryza sativa Japonica Group]
           gi|113533639|dbj|BAF06022.1| Os01g0723600 [Oryza sativa
           Japonica Group] gi|215766650|dbj|BAG98878.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 409

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
 Frame = -3

Query: 302 ITSSATGEAFVSVPEVP-AVPMMLGSMPPKRPRKSVCLFYCEEMRELAEQVALQSDAIQL 126
           I S+A+G    +    P AVP M G++      K+V LF+CEEMRELAEQV  ++D I+L
Sbjct: 67  IVSNASGIHLAAPVLAPLAVPKMTGAVGA---HKNVLLFHCEEMRELAEQVVARNDDIEL 123

Query: 125 RSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASLSSPKVLF 3
           RSI+WRTF DGFPNLFI NAH IRGQHVAFLAS SSP V+F
Sbjct: 124 RSISWRTFADGFPNLFISNAHTIRGQHVAFLASFSSPSVIF 164


>ref|XP_002456270.1| hypothetical protein SORBIDRAFT_03g033270 [Sorghum bicolor]
           gi|241928245|gb|EES01390.1| hypothetical protein
           SORBIDRAFT_03g033270 [Sorghum bicolor]
          Length = 407

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/112 (57%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
 Frame = -3

Query: 320 LYGNGDITSSATGEAFVSVPEVP------AVPMMLGSMPPKRPRKSVCLFYCEEMRELAE 159
           L G G  +SSA      +   VP      AVP M GSM   +  K+V LFYCEEMR+LA 
Sbjct: 54  LGGVGAASSSAAAAGNGTGLHVPPTTAPLAVPKMAGSM---KTHKNVLLFYCEEMRDLAR 110

Query: 158 QVALQSDAIQLRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASLSSPKVLF 3
           QV  ++D I+LRSI+WR F DG+PNLFI NAH IRGQHVAFLAS SSP V+F
Sbjct: 111 QVVARNDDIELRSISWRKFPDGYPNLFISNAHNIRGQHVAFLASFSSPSVIF 162


>ref|XP_001765886.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162682792|gb|EDQ69207.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 468

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/116 (45%), Positives = 75/116 (64%), Gaps = 13/116 (11%)
 Frame = -3

Query: 311 NGDITSSATGEAFVSVPEVPAVPMMLGS-------------MPPKRPRKSVCLFYCEEMR 171
           +G  +SS   + +  +  +P    ++GS             +  +  +K VCLFYC+E  
Sbjct: 93  DGAASSSVPSDIYAGISTIPISASLIGSGVDASELNGGVCSLTDRPNKKQVCLFYCDETE 152

Query: 170 ELAEQVALQSDAIQLRSINWRTFEDGFPNLFIPNAHGIRGQHVAFLASLSSPKVLF 3
           +LA ++A ++D+I+L+SI W TF DGFPNLF+PNAHGIRGQHVAFLAS SSP V+F
Sbjct: 153 DLARRIAAETDSIELKSIRWGTFADGFPNLFVPNAHGIRGQHVAFLASFSSPAVIF 208


>ref|XP_002272590.2| PREDICTED: ribose-phosphate pyrophosphokinase 3, mitochondrial
           [Vitis vinifera]
          Length = 399

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/87 (66%), Positives = 65/87 (74%)
 Frame = -3

Query: 263 PEVPAVPMMLGSMPPKRPRKSVCLFYCEEMRELAEQVALQSDAIQLRSINWRTFEDGFPN 84
           P + A    L S P  R  K VCLFYC E + LAE++A +SDAI+LRSI WRTFEDGFPN
Sbjct: 70  PVLMASTATLTSSP--RNAKKVCLFYCAETKALAERIAAESDAIELRSITWRTFEDGFPN 127

Query: 83  LFIPNAHGIRGQHVAFLASLSSPKVLF 3
           LFI NA GIRGQHVAFLAS SSP V+F
Sbjct: 128 LFISNAQGIRGQHVAFLASFSSPGVIF 154


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