BLASTX nr result

ID: Dioscorea21_contig00021087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021087
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [S...   120   1e-25
ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|g...   116   2e-24
ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841...   113   2e-23
gb|AAS21008.1| fiber protein [Hyacinthus orientalis]                  110   2e-22
dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japoni...   106   2e-21

>ref|XP_002451641.1| hypothetical protein SORBIDRAFT_04g005070 [Sorghum bicolor]
           gi|241931472|gb|EES04617.1| hypothetical protein
           SORBIDRAFT_04g005070 [Sorghum bicolor]
          Length = 91

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/69 (79%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   RAFYNEIRGMRLRELPAYLKPRLSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGM 182
           RA YNEIRGM++RE+PAYLKPRL+ +N+KKSADQAVDRYIEKYI+TSS +PLFHVC GGM
Sbjct: 4   RALYNEIRGMKVREVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLFHVCFGGM 63

Query: 183 IFSYLVALP 209
           +FSYLV LP
Sbjct: 64  VFSYLVNLP 72


>ref|NP_001150164.1| fiber protein Fb15 [Zea mays] gi|195637274|gb|ACG38105.1| fiber
           protein Fb15 [Zea mays] gi|413935799|gb|AFW70350.1|
           fiber protein Fb15 [Zea mays]
          Length = 91

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/69 (76%), Positives = 63/69 (91%)
 Frame = +3

Query: 3   RAFYNEIRGMRLRELPAYLKPRLSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGM 182
           RA YNEIR M++R++PAYLKPRL+ +N+KKSADQAVDRYIEKYI+TSS +PL+HVCIGGM
Sbjct: 4   RALYNEIRSMKVRDVPAYLKPRLTWDNVKKSADQAVDRYIEKYIDTSSPDPLYHVCIGGM 63

Query: 183 IFSYLVALP 209
           IFSY V LP
Sbjct: 64  IFSYFVNLP 72


>ref|XP_003570425.1| PREDICTED: uncharacterized protein LOC100841437 isoform 1
           [Brachypodium distachyon]
           gi|357137677|ref|XP_003570426.1| PREDICTED:
           uncharacterized protein LOC100841437 isoform 2
           [Brachypodium distachyon]
          Length = 88

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/69 (75%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   RAFYNEIRGMRLRELPAYLKPRLSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGM 182
           RA YNEIR M++RE+PAYLKPRL+  N+KKS DQAVDRYIEKYIET S +P+FHVC GGM
Sbjct: 4   RALYNEIRAMKVREVPAYLKPRLTWGNVKKSTDQAVDRYIEKYIETGSADPIFHVCFGGM 63

Query: 183 IFSYLVALP 209
            FSYLV LP
Sbjct: 64  AFSYLVNLP 72


>gb|AAS21008.1| fiber protein [Hyacinthus orientalis]
          Length = 135

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/63 (80%), Positives = 60/63 (95%)
 Frame = +3

Query: 21  IRGMRLRELPAYLKPRLSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGMIFSYLV 200
           I+G+++RELPA++KP+LS  NIKK+ DQAVDRYIEKYI+TSSVEPLFHVCIGGMIFSYLV
Sbjct: 9   IKGLKVRELPAHVKPKLSWTNIKKTTDQAVDRYIEKYIDTSSVEPLFHVCIGGMIFSYLV 68

Query: 201 ALP 209
           ALP
Sbjct: 69  ALP 71


>dbj|BAD27614.1| putative fiber protein Fb15 [Oryza sativa Japonica Group]
           gi|125538299|gb|EAY84694.1| hypothetical protein
           OsI_06064 [Oryza sativa Indica Group]
           gi|125581003|gb|EAZ21934.1| hypothetical protein
           OsJ_05587 [Oryza sativa Japonica Group]
           gi|215764954|dbj|BAG86651.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767695|dbj|BAG99923.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 95

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/69 (73%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   RAFYNEIRGMRLRELPAYLKPRLSLENIKKSADQAVDRYIEKYIETSSVEPLFHVCIGGM 182
           RA  +EIRGM++RE+P YLKPRLS EN+KKS+DQAVDRYI+KYIETSS EPLFHV  G M
Sbjct: 4   RALISEIRGMKVREVPGYLKPRLSWENVKKSSDQAVDRYIDKYIETSSPEPLFHVIYGLM 63

Query: 183 IFSYLVALP 209
            FSYL+ LP
Sbjct: 64  AFSYLINLP 72


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