BLASTX nr result
ID: Dioscorea21_contig00021084
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00021084 (1434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514688.1| hypothetical protein RCOM_1470460 [Ricinus c... 182 2e-43 ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250... 180 7e-43 emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera] 180 7e-43 tpg|DAA45845.1| TPA: putative MYB DNA-binding domain superfamily... 173 1e-40 ref|NP_001148102.1| DNA binding protein [Zea mays] gi|195615818|... 173 1e-40 >ref|XP_002514688.1| hypothetical protein RCOM_1470460 [Ricinus communis] gi|223546292|gb|EEF47794.1| hypothetical protein RCOM_1470460 [Ricinus communis] Length = 473 Score = 182 bits (462), Expect = 2e-43 Identities = 91/176 (51%), Positives = 125/176 (71%), Gaps = 4/176 (2%) Frame = +3 Query: 918 PILRCVPIGPDHQADIPVWVPSSSKN---SSGTACAESTINQSNGDTTD-KWVGTCIIPM 1085 P VPIG ++QA+IP W P SK+ SSGT N ++G+ + + +GTC+IPM Sbjct: 74 PPQEAVPIGSNYQAEIPEWSPHDSKSKLKSSGTPGVILDANLASGEKDENRLMGTCVIPM 133 Query: 1086 PDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFSYM 1265 PDF K +++VG + +DC+C DEG++ CVRQH+++AREK+K VLG + F LGF M Sbjct: 134 PDF---KCIDEVGNVK--NDCSCLDEGSIRCVRQHILKAREKVKRVLGMERFKDLGFCDM 188 Query: 1266 GENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433 GE V+ W+EEEE LFHE+VF++P SLGKNFW++L AFP R+ K++V YYFNVFM Sbjct: 189 GEAVSENWTEEEEQLFHEVVFSNPVSLGKNFWSHLSAAFPFRTKKDIVCYYFNVFM 244 >ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250913 [Vitis vinifera] Length = 550 Score = 180 bits (457), Expect = 7e-43 Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 13/182 (7%) Frame = +3 Query: 927 RCVPIGPDHQADIPVWVPSSSKN-------------SSGTACAESTINQSNGDTTDKWVG 1067 R VP+GPDHQA++PVW KN SS + ++ T++ G+ ++W+G Sbjct: 132 RQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVD---GENEERWMG 188 Query: 1068 TCIIPMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDS 1247 TC+IPMP+ +L V G +DC C D ++ CVRQHVMEAREKL+ LG++ F Sbjct: 189 TCVIPMPEENLSAE-NGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFME 247 Query: 1248 LGFSYMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNV 1427 LGF MGE VA KW EEEE FHE+VF+HP SLG+NFW +L F +R+ +ELVSYYFNV Sbjct: 248 LGFCDMGEEVALKWHEEEEQAFHEVVFSHPASLGQNFWEHLSATFSYRAKQELVSYYFNV 307 Query: 1428 FM 1433 FM Sbjct: 308 FM 309 >emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera] Length = 605 Score = 180 bits (457), Expect = 7e-43 Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 13/182 (7%) Frame = +3 Query: 927 RCVPIGPDHQADIPVWVPSSSKN-------------SSGTACAESTINQSNGDTTDKWVG 1067 R VP+GPDHQA++PVW KN SS + ++ T++ G+ ++W+G Sbjct: 187 RQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVD---GENEERWMG 243 Query: 1068 TCIIPMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDS 1247 TC+IPMP+ +L V G +DC C D ++ CVRQHVMEAREKL+ LG++ F Sbjct: 244 TCVIPMPEENLSAE-NGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFME 302 Query: 1248 LGFSYMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNV 1427 LGF MGE VA KW EEEE FHE+VF+HP SLG+NFW +L F +R+ +ELVSYYFNV Sbjct: 303 LGFCDMGEEVALKWHEEEEQAFHEVVFSHPASLGQNFWEHLSATFSYRAKQELVSYYFNV 362 Query: 1428 FM 1433 FM Sbjct: 363 FM 364 >tpg|DAA45845.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays] Length = 636 Score = 173 bits (438), Expect = 1e-40 Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 11/178 (6%) Frame = +3 Query: 933 VPIGPDHQADIPVW-------VPSSSKNSSGTACAESTINQS--NGD--TTDKWVGTCII 1079 VPIGP+HQADIP W VP +S+ + C+ ++ ++S GD +DKW+ C++ Sbjct: 333 VPIGPEHQADIPEWRPLNSMIVPGASEFCANLDCSSASTSESVPRGDDYVSDKWIRYCVV 392 Query: 1080 PMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFS 1259 P+ P AG DC C DEG++ C RQH++EAR+ LKM+LG+D F LG Sbjct: 393 PVTCCSSPVDW----AGDSKIDCNCSDEGSMRCSRQHIIEARDNLKMILGQDRFRELGLC 448 Query: 1260 YMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433 MGE+VA +W++EEE LF +VF +P SLGKNFW++LP AFP+++++E VSYYFNVFM Sbjct: 449 EMGEDVALRWTDEEEKLFQRVVFLNPVSLGKNFWDHLPDAFPNKTSQEFVSYYFNVFM 506 >ref|NP_001148102.1| DNA binding protein [Zea mays] gi|195615818|gb|ACG29739.1| DNA binding protein [Zea mays] Length = 492 Score = 173 bits (438), Expect = 1e-40 Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 11/178 (6%) Frame = +3 Query: 933 VPIGPDHQADIPVW-------VPSSSKNSSGTACAESTINQS--NGD--TTDKWVGTCII 1079 VPIGP+HQADIP W VP +S+ + C+ ++ ++S GD +DKW+ C++ Sbjct: 189 VPIGPEHQADIPEWRPLNSMIVPGASEFCANLDCSSASTSESVPRGDDYVSDKWIRYCVV 248 Query: 1080 PMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFS 1259 P+ P AG DC C DEG++ C RQH++EAR+ LKM+LG+D F LG Sbjct: 249 PVTCCSSPVDW----AGDSKIDCNCSDEGSMRCSRQHIIEARDNLKMILGQDRFRELGLC 304 Query: 1260 YMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433 MGE+VA +W++EEE LF +VF +P SLGKNFW++LP AFP+++++E VSYYFNVFM Sbjct: 305 EMGEDVALRWTDEEEKLFQRVVFLNPVSLGKNFWDHLPDAFPNKTSQEFVSYYFNVFM 362