BLASTX nr result

ID: Dioscorea21_contig00021084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021084
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514688.1| hypothetical protein RCOM_1470460 [Ricinus c...   182   2e-43
ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250...   180   7e-43
emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]   180   7e-43
tpg|DAA45845.1| TPA: putative MYB DNA-binding domain superfamily...   173   1e-40
ref|NP_001148102.1| DNA binding protein [Zea mays] gi|195615818|...   173   1e-40

>ref|XP_002514688.1| hypothetical protein RCOM_1470460 [Ricinus communis]
            gi|223546292|gb|EEF47794.1| hypothetical protein
            RCOM_1470460 [Ricinus communis]
          Length = 473

 Score =  182 bits (462), Expect = 2e-43
 Identities = 91/176 (51%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
 Frame = +3

Query: 918  PILRCVPIGPDHQADIPVWVPSSSKN---SSGTACAESTINQSNGDTTD-KWVGTCIIPM 1085
            P    VPIG ++QA+IP W P  SK+   SSGT       N ++G+  + + +GTC+IPM
Sbjct: 74   PPQEAVPIGSNYQAEIPEWSPHDSKSKLKSSGTPGVILDANLASGEKDENRLMGTCVIPM 133

Query: 1086 PDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFSYM 1265
            PDF   K +++VG  +  +DC+C DEG++ CVRQH+++AREK+K VLG + F  LGF  M
Sbjct: 134  PDF---KCIDEVGNVK--NDCSCLDEGSIRCVRQHILKAREKVKRVLGMERFKDLGFCDM 188

Query: 1266 GENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433
            GE V+  W+EEEE LFHE+VF++P SLGKNFW++L  AFP R+ K++V YYFNVFM
Sbjct: 189  GEAVSENWTEEEEQLFHEVVFSNPVSLGKNFWSHLSAAFPFRTKKDIVCYYFNVFM 244


>ref|XP_002274465.2| PREDICTED: uncharacterized protein LOC100250913 [Vitis vinifera]
          Length = 550

 Score =  180 bits (457), Expect = 7e-43
 Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
 Frame = +3

Query: 927  RCVPIGPDHQADIPVWVPSSSKN-------------SSGTACAESTINQSNGDTTDKWVG 1067
            R VP+GPDHQA++PVW     KN             SS +  ++ T++   G+  ++W+G
Sbjct: 132  RQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVD---GENEERWMG 188

Query: 1068 TCIIPMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDS 1247
            TC+IPMP+ +L      V  G   +DC C D  ++ CVRQHVMEAREKL+  LG++ F  
Sbjct: 189  TCVIPMPEENLSAE-NGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFME 247

Query: 1248 LGFSYMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNV 1427
            LGF  MGE VA KW EEEE  FHE+VF+HP SLG+NFW +L   F +R+ +ELVSYYFNV
Sbjct: 248  LGFCDMGEEVALKWHEEEEQAFHEVVFSHPASLGQNFWEHLSATFSYRAKQELVSYYFNV 307

Query: 1428 FM 1433
            FM
Sbjct: 308  FM 309


>emb|CAN60165.1| hypothetical protein VITISV_040087 [Vitis vinifera]
          Length = 605

 Score =  180 bits (457), Expect = 7e-43
 Identities = 90/182 (49%), Positives = 118/182 (64%), Gaps = 13/182 (7%)
 Frame = +3

Query: 927  RCVPIGPDHQADIPVWVPSSSKN-------------SSGTACAESTINQSNGDTTDKWVG 1067
            R VP+GPDHQA++PVW     KN             SS +  ++ T++   G+  ++W+G
Sbjct: 187  RQVPVGPDHQANVPVWSLQKVKNRLDKLETSNRYISSSQSMVSDQTVD---GENEERWMG 243

Query: 1068 TCIIPMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDS 1247
            TC+IPMP+ +L      V  G   +DC C D  ++ CVRQHVMEAREKL+  LG++ F  
Sbjct: 244  TCVIPMPEENLSAE-NGVKTGDGRTDCGCLDNDSIRCVRQHVMEAREKLRKTLGQEKFME 302

Query: 1248 LGFSYMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNV 1427
            LGF  MGE VA KW EEEE  FHE+VF+HP SLG+NFW +L   F +R+ +ELVSYYFNV
Sbjct: 303  LGFCDMGEEVALKWHEEEEQAFHEVVFSHPASLGQNFWEHLSATFSYRAKQELVSYYFNV 362

Query: 1428 FM 1433
            FM
Sbjct: 363  FM 364


>tpg|DAA45845.1| TPA: putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 636

 Score =  173 bits (438), Expect = 1e-40
 Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 11/178 (6%)
 Frame = +3

Query: 933  VPIGPDHQADIPVW-------VPSSSKNSSGTACAESTINQS--NGD--TTDKWVGTCII 1079
            VPIGP+HQADIP W       VP +S+  +   C+ ++ ++S   GD   +DKW+  C++
Sbjct: 333  VPIGPEHQADIPEWRPLNSMIVPGASEFCANLDCSSASTSESVPRGDDYVSDKWIRYCVV 392

Query: 1080 PMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFS 1259
            P+     P       AG    DC C DEG++ C RQH++EAR+ LKM+LG+D F  LG  
Sbjct: 393  PVTCCSSPVDW----AGDSKIDCNCSDEGSMRCSRQHIIEARDNLKMILGQDRFRELGLC 448

Query: 1260 YMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433
             MGE+VA +W++EEE LF  +VF +P SLGKNFW++LP AFP+++++E VSYYFNVFM
Sbjct: 449  EMGEDVALRWTDEEEKLFQRVVFLNPVSLGKNFWDHLPDAFPNKTSQEFVSYYFNVFM 506


>ref|NP_001148102.1| DNA binding protein [Zea mays] gi|195615818|gb|ACG29739.1| DNA
            binding protein [Zea mays]
          Length = 492

 Score =  173 bits (438), Expect = 1e-40
 Identities = 85/178 (47%), Positives = 119/178 (66%), Gaps = 11/178 (6%)
 Frame = +3

Query: 933  VPIGPDHQADIPVW-------VPSSSKNSSGTACAESTINQS--NGD--TTDKWVGTCII 1079
            VPIGP+HQADIP W       VP +S+  +   C+ ++ ++S   GD   +DKW+  C++
Sbjct: 189  VPIGPEHQADIPEWRPLNSMIVPGASEFCANLDCSSASTSESVPRGDDYVSDKWIRYCVV 248

Query: 1080 PMPDFDLPKTLEDVGAGRRLSDCTCGDEGAVICVRQHVMEAREKLKMVLGKDNFDSLGFS 1259
            P+     P       AG    DC C DEG++ C RQH++EAR+ LKM+LG+D F  LG  
Sbjct: 249  PVTCCSSPVDW----AGDSKIDCNCSDEGSMRCSRQHIIEARDNLKMILGQDRFRELGLC 304

Query: 1260 YMGENVASKWSEEEEVLFHEIVFAHPPSLGKNFWNYLPRAFPHRSNKELVSYYFNVFM 1433
             MGE+VA +W++EEE LF  +VF +P SLGKNFW++LP AFP+++++E VSYYFNVFM
Sbjct: 305  EMGEDVALRWTDEEEKLFQRVVFLNPVSLGKNFWDHLPDAFPNKTSQEFVSYYFNVFM 362


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