BLASTX nr result

ID: Dioscorea21_contig00021043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021043
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ85190.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   3e-12
dbj|BAK04630.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   9e-12
dbj|BAK04093.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   1e-11
dbj|BAJ85093.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   1e-11
ref|XP_003558968.1| PREDICTED: F-box protein At4g00755-like [Bra...    71   8e-11

>dbj|BAJ85190.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 432

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 44/72 (61%)
 Frame = +1

Query: 4   LQTFKLPRPFVCIXXXXXXXXXXXXXXXXXDNLYYICVCHVQVVGRLLGPVFDAEIPDTM 183
           LQTFKLPRP +CI                 D+ YYICVCH QVVGR L PVF  +I D+ 
Sbjct: 245 LQTFKLPRPVLCIGGVVKIELLGRVQKQATDDRYYICVCHAQVVGRSLSPVFMVDINDSG 304

Query: 184 GNLVLKYFPDAR 219
           GN +LK+ P+A+
Sbjct: 305 GNAILKHLPEAK 316


>dbj|BAK04630.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 428

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/71 (49%), Positives = 43/71 (60%)
 Frame = +1

Query: 7   QTFKLPRPFVCIXXXXXXXXXXXXXXXXXDNLYYICVCHVQVVGRLLGPVFDAEIPDTMG 186
           QTFKLPRP +CI                 D+ YYICVCH QVVGR L PVF  +I D+ G
Sbjct: 242 QTFKLPRPVMCIGGVVKIELLGRVQKQATDDRYYICVCHAQVVGRSLSPVFMVDINDSGG 301

Query: 187 NLVLKYFPDAR 219
           N +LK+ P+A+
Sbjct: 302 NAILKHLPEAK 312


>dbj|BAK04093.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +1

Query: 4   LQTFKLPRPFVCIXXXXXXXXXXXXXXXXXDNLYYICVCHVQVVGRLLGPVFDAEIPDTM 183
           LQ+FKLPRP +CI                 D++YYICVCHVQV+GR L P+F  +I D  
Sbjct: 244 LQSFKLPRPALCIGGVLMIELLGRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDISDPE 303

Query: 184 GNLVLKYFPDARGCS 228
           G+ +LKY P A+  S
Sbjct: 304 GHSILKYLPGAKDLS 318


>dbj|BAJ85093.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/75 (46%), Positives = 45/75 (60%)
 Frame = +1

Query: 4   LQTFKLPRPFVCIXXXXXXXXXXXXXXXXXDNLYYICVCHVQVVGRLLGPVFDAEIPDTM 183
           LQ+FKLPRP +CI                 D++YYICVCHVQV+GR L P+F  +I D  
Sbjct: 244 LQSFKLPRPALCIGGVLMIELLGRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDISDPE 303

Query: 184 GNLVLKYFPDARGCS 228
           G+ +LKY P A+  S
Sbjct: 304 GHSILKYLPGAKDLS 318


>ref|XP_003558968.1| PREDICTED: F-box protein At4g00755-like [Brachypodium distachyon]
          Length = 386

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/72 (48%), Positives = 41/72 (56%)
 Frame = +1

Query: 4   LQTFKLPRPFVCIXXXXXXXXXXXXXXXXXDNLYYICVCHVQVVGRLLGPVFDAEIPDTM 183
           LQ+F+LPRP +CI                 D+ YYICVCH QVVGR L PVF  +I D  
Sbjct: 256 LQSFRLPRPVLCIGGVVKIELLGRVQKQATDDKYYICVCHAQVVGRSLSPVFVVDIADAG 315

Query: 184 GNLVLKYFPDAR 219
           G+ VLKY P  R
Sbjct: 316 GHAVLKYSPGVR 327


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