BLASTX nr result

ID: Dioscorea21_contig00021023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00021023
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   112   4e-23
emb|CBI35182.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [...   110   9e-23
ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA...   107   1e-21
ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g...   107   1e-21

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  112 bits (279), Expect = 4e-23
 Identities = 63/102 (61%), Positives = 67/102 (65%)
 Frame = -1

Query: 307 QVTQHMQIPLSYADAVIGGAGANISYIRRASGATITIQETRGVPGEMTVEIIGSXXXXXX 128
           Q+TQ MQIPLSYADAVIG AG +ISYIRRASGAT+TIQETRGVPGEMTVEI G+      
Sbjct: 425 QITQQMQIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQT 484

Query: 127 XXQLIQNFMXXXXXXXXXXXXXXXXXXXXPGDQSYNPYAAHG 2
             QLIQNFM                      DQ YNPYAAHG
Sbjct: 485 AQQLIQNFMAEAGAPTQAQTGGST-------DQGYNPYAAHG 519


>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  110 bits (276), Expect = 9e-23
 Identities = 64/102 (62%), Positives = 67/102 (65%)
 Frame = -1

Query: 307 QVTQHMQIPLSYADAVIGGAGANISYIRRASGATITIQETRGVPGEMTVEIIGSXXXXXX 128
           QVTQ MQIPLSYADAVIG AGA+ISYIRRASGAT+TIQETRGVPGEMTVEI G+      
Sbjct: 388 QVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQA 447

Query: 127 XXQLIQNFMXXXXXXXXXXXXXXXXXXXXPGDQSYNPYAAHG 2
             QLIQNFM                      DQ YN YAAHG
Sbjct: 448 AQQLIQNFM-------AEAAAPAQAQAGGSADQGYNSYAAHG 482


>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
          Length = 442

 Score =  110 bits (276), Expect = 9e-23
 Identities = 64/102 (62%), Positives = 67/102 (65%)
 Frame = -1

Query: 307 QVTQHMQIPLSYADAVIGGAGANISYIRRASGATITIQETRGVPGEMTVEIIGSXXXXXX 128
           QVTQ MQIPLSYADAVIG AGA+ISYIRRASGAT+TIQETRGVPGEMTVEI G+      
Sbjct: 319 QVTQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQA 378

Query: 127 XXQLIQNFMXXXXXXXXXXXXXXXXXXXXPGDQSYNPYAAHG 2
             QLIQNFM                      DQ YN YAAHG
Sbjct: 379 AQQLIQNFM-------AEAAAPAQAQAGGSADQGYNSYAAHG 413


>ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
           [Glycine max]
          Length = 446

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/102 (59%), Positives = 65/102 (63%)
 Frame = -1

Query: 307 QVTQHMQIPLSYADAVIGGAGANISYIRRASGATITIQETRGVPGEMTVEIIGSXXXXXX 128
           Q+TQ MQIPLSYADAVIG AGA+ISYIRRASGAT+TIQE RGVPGEMTVEI G+      
Sbjct: 321 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQT 380

Query: 127 XXQLIQNFMXXXXXXXXXXXXXXXXXXXXPGDQSYNPYAAHG 2
             QLIQNFM                      DQ YN Y AHG
Sbjct: 381 AQQLIQNFM--AEAAAAAAAPAQPQTTVPAADQGYNSYPAHG 420


>ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 443

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/102 (59%), Positives = 65/102 (63%)
 Frame = -1

Query: 307 QVTQHMQIPLSYADAVIGGAGANISYIRRASGATITIQETRGVPGEMTVEIIGSXXXXXX 128
           Q+TQ MQIPLSYADAVIG AGA+ISYIRRASGAT+TIQE RGVPGEMTVEI G+      
Sbjct: 318 QITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQT 377

Query: 127 XXQLIQNFMXXXXXXXXXXXXXXXXXXXXPGDQSYNPYAAHG 2
             QLIQNFM                      DQ YN Y AHG
Sbjct: 378 AQQLIQNFM--AEAAAAAAAPAQPQTTVPAADQGYNSYPAHG 417


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