BLASTX nr result

ID: Dioscorea21_contig00020979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020979
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW77258.1| hypothetical protein ZEAMMB73_435016 [Zea mays]        168   4e-40
ref|XP_002440639.1| hypothetical protein SORBIDRAFT_09g004420 [S...   168   4e-40
gb|ACF78854.1| unknown [Zea mays] gi|413948724|gb|AFW81373.1| hy...   168   4e-40
ref|NP_001105468.1| tubulin gamma-1 chain [Zea mays] gi|640021|e...   168   4e-40
ref|NP_001105460.1| tubulin gamma-2 chain [Zea mays] gi|2501423|...   168   4e-40

>gb|AFW77258.1| hypothetical protein ZEAMMB73_435016 [Zea mays]
          Length = 311

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 78
           ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268

Query: 77  LMTGYTPLTVERQVNVIRKTTVLDV 3
           LMTGYTPLTVERQVN+IRKTTVLDV
Sbjct: 269 LMTGYTPLTVERQVNMIRKTTVLDV 293


>ref|XP_002440639.1| hypothetical protein SORBIDRAFT_09g004420 [Sorghum bicolor]
           gi|241945924|gb|EES19069.1| hypothetical protein
           SORBIDRAFT_09g004420 [Sorghum bicolor]
          Length = 469

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 78
           ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268

Query: 77  LMTGYTPLTVERQVNVIRKTTVLDV 3
           LMTGYTPLTVERQVN+IRKTTVLDV
Sbjct: 269 LMTGYTPLTVERQVNMIRKTTVLDV 293


>gb|ACF78854.1| unknown [Zea mays] gi|413948724|gb|AFW81373.1| hypothetical protein
           ZEAMMB73_320274 [Zea mays]
          Length = 351

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 78
           ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 91  ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 150

Query: 77  LMTGYTPLTVERQVNVIRKTTVLDV 3
           LMTGYTPLTVERQVN+IRKTTVLDV
Sbjct: 151 LMTGYTPLTVERQVNMIRKTTVLDV 175


>ref|NP_001105468.1| tubulin gamma-1 chain [Zea mays] gi|640021|emb|CAA58670.1|
           gamma-tubulin 1 [Zea mays] gi|224035097|gb|ACN36624.1|
           unknown [Zea mays] gi|413948720|gb|AFW81369.1| tubulin
           gamma-3 chain isoform 1 [Zea mays]
           gi|413948721|gb|AFW81370.1| tubulin gamma-3 chain
           isoform 2 [Zea mays] gi|413948722|gb|AFW81371.1| tubulin
           gamma-3 chain isoform 3 [Zea mays]
           gi|413948723|gb|AFW81372.1| tubulin gamma-3 chain
           isoform 4 [Zea mays]
          Length = 469

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 78
           ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268

Query: 77  LMTGYTPLTVERQVNVIRKTTVLDV 3
           LMTGYTPLTVERQVN+IRKTTVLDV
Sbjct: 269 LMTGYTPLTVERQVNMIRKTTVLDV 293


>ref|NP_001105460.1| tubulin gamma-2 chain [Zea mays] gi|2501423|sp|Q41808.1|TBG2_MAIZE
           RecName: Full=Tubulin gamma-2 chain; AltName:
           Full=Gamma-2-tubulin gi|474406|emb|CAA55488.1|
           gamma-tubulin [Zea mays] gi|223943885|gb|ACN26026.1|
           unknown [Zea mays] gi|413944608|gb|AFW77257.1| tubulin
           gamma-2 chain [Zea mays]
          Length = 469

 Score =  168 bits (426), Expect = 4e-40
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = -1

Query: 257 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 78
           ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF
Sbjct: 209 ALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHF 268

Query: 77  LMTGYTPLTVERQVNVIRKTTVLDV 3
           LMTGYTPLTVERQVN+IRKTTVLDV
Sbjct: 269 LMTGYTPLTVERQVNMIRKTTVLDV 293


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