BLASTX nr result

ID: Dioscorea21_contig00020971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020971
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61069.1| hypothetical protein OsJ_14927 [Oryza sativa Japo...    71   1e-10
gb|EEC67866.1| hypothetical protein OsI_35492 [Oryza sativa Indi...    71   1e-10
dbj|BAK07904.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   5e-10
gb|ABK24483.1| unknown [Picea sitchensis]                              68   7e-10
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...    67   2e-09

>gb|EEE61069.1| hypothetical protein OsJ_14927 [Oryza sativa Japonica Group]
          Length = 623

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 313 GMNGSVIVEKILSIEDLRYGYNAAKNRYEDLIAAGILDPTKV 188
           G+NGS ++EK+L  ED RYGYNAAKNRYEDL+AAGILDP+KV
Sbjct: 527 GVNGSFVIEKVLLNEDSRYGYNAAKNRYEDLMAAGILDPSKV 568


>gb|EEC67866.1| hypothetical protein OsI_35492 [Oryza sativa Indica Group]
          Length = 588

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 313 GMNGSVIVEKILSIEDLRYGYNAAKNRYEDLIAAGILDPTKV 188
           G+NGS ++EK+L  ED RYGYNAAKNRYEDL+AAGILDP+KV
Sbjct: 492 GVNGSFVIEKVLLNEDSRYGYNAAKNRYEDLMAAGILDPSKV 533


>dbj|BAK07904.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/42 (69%), Positives = 39/42 (92%)
 Frame = -1

Query: 313 GMNGSVIVEKILSIEDLRYGYNAAKNRYEDLIAAGILDPTKV 188
           G+NGSV++EK+L+I++ RYGYNAA  +YEDL+AAGI+DPTKV
Sbjct: 513 GVNGSVVIEKVLAIDNSRYGYNAATGKYEDLMAAGIIDPTKV 554


>gb|ABK24483.1| unknown [Picea sitchensis]
          Length = 617

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/42 (71%), Positives = 38/42 (90%)
 Frame = -1

Query: 313 GMNGSVIVEKILSIEDLRYGYNAAKNRYEDLIAAGILDPTKV 188
           G+NGSV+VEK+LS +D +YGYNAA  +YEDL+AAGI+DPTKV
Sbjct: 532 GVNGSVVVEKVLSSDDPKYGYNAATGKYEDLMAAGIIDPTKV 573


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/42 (66%), Positives = 39/42 (92%)
 Frame = -1

Query: 313 GMNGSVIVEKILSIEDLRYGYNAAKNRYEDLIAAGILDPTKV 188
           G+NG++++ +ILS +D RYGYNAA++RYEDLI+AGI+DPTKV
Sbjct: 496 GVNGNIVINQILSNDDPRYGYNAARDRYEDLISAGIIDPTKV 537


Top