BLASTX nr result

ID: Dioscorea21_contig00020961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020961
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94308.1| predicted protein [Hordeum vulgare subsp. vulgare]    327   2e-87
ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   324   2e-86
emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]   324   2e-86
ref|XP_003579963.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   320   5e-85
ref|NP_001140318.1| uncharacterized protein LOC100272363 [Zea ma...   318   1e-84

>dbj|BAJ94308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 298

 Score =  327 bits (839), Expect = 2e-87
 Identities = 161/311 (51%), Positives = 206/311 (66%), Gaps = 3/311 (0%)
 Frame = -3

Query: 1016 MAEVPTIDLTNF---PSDEPKLRQACENLGCFRIIGHGIPASLRTDMKSTVRSLFDLPAH 846
            M E+P IDL      P D  +LR ACE LGCFR+ GHG+PA+L+ +MK++VR+LFDLP  
Sbjct: 1    MVEIPVIDLRLAGARPEDSARLRDACERLGCFRVSGHGVPAALQAEMKASVRALFDLPDE 60

Query: 845  IKRLNSDIIPGSGYVAPSLANPLYEAFGLYDASSSLDILSFCSNLQASPFQQHTIATYSS 666
             KR N+DII GSGYVAPS ANPLYEAFGL DA+   D+ +FC+ L A P  + T+  Y+ 
Sbjct: 61   AKRRNTDIIAGSGYVAPSPANPLYEAFGLLDAAVPADVDAFCARLDAPPHARETVKAYAE 120

Query: 665  KLHALVIDIANKIAKSIGVPHYSFEHWPCQFRLNKYSFTQETIGSSGVQIHTDSSFLTVL 486
             +H L++D+A K+A S+G+  + F+ WPCQFR+N+Y++TQ+T+GSSGVQIHTDS FLTVL
Sbjct: 121  AMHELIVDVAGKVAASLGLEGHPFQDWPCQFRMNRYNYTQDTVGSSGVQIHTDSGFLTVL 180

Query: 485  QEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVPDSFLINLGDIAKVWSN 306
            QE                                       PVP SFL+N+G++   WSN
Sbjct: 181  QE------------------DDRVGGLEVLDPATDEFVRVDPVPGSFLVNIGEVGTAWSN 222

Query: 305  GRLHNLKHRVQCKEAVERISIALFLLGPKDAPVEPPPELVDSHHPRLYKSITVENYRQLR 126
            GRLH +KHRVQC  AV RISIA+FLL PKD  V  P  LVD+HHPR +K    ++YR+LR
Sbjct: 223  GRLHTVKHRVQCVAAVPRISIAMFLLAPKDGRVCAPEALVDAHHPRRFKPFNYDDYRKLR 282

Query: 125  FSTGSRAGESL 93
             STG RAGE+L
Sbjct: 283  LSTGERAGEAL 293


>ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 298

 Score =  324 bits (831), Expect = 2e-86
 Identities = 162/306 (52%), Positives = 206/306 (67%)
 Frame = -3

Query: 1010 EVPTIDLTNFPSDEPKLRQACENLGCFRIIGHGIPASLRTDMKSTVRSLFDLPAHIKRLN 831
            ++P+ID+ +FP    +LR+ACE  GCFR++ H IP SL ++MKS V SL DLP  +KR N
Sbjct: 5    DIPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRN 64

Query: 830  SDIIPGSGYVAPSLANPLYEAFGLYDASSSLDILSFCSNLQASPFQQHTIATYSSKLHAL 651
            +D+I GSGY+APS  NPLYEA GLYD +S   + +FCS L ASP Q+ TI  Y+  +  L
Sbjct: 65   TDVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQEL 124

Query: 650  VIDIANKIAKSIGVPHYSFEHWPCQFRLNKYSFTQETIGSSGVQIHTDSSFLTVLQEXXX 471
             +DI NK+A+++G+    F+ WPCQFR+NKY+FT ET+GS GVQIHTDSSFLT+LQ+   
Sbjct: 125  AMDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQD--- 181

Query: 470  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVPDSFLINLGDIAKVWSNGRLHN 291
                                                P+P + L+NLGDIA VWSNGRL N
Sbjct: 182  ----------------DENVGGLEVMDKSGAFVAVDPMPGTLLVNLGDIATVWSNGRLCN 225

Query: 290  LKHRVQCKEAVERISIALFLLGPKDAPVEPPPELVDSHHPRLYKSITVENYRQLRFSTGS 111
            +KHRVQCKEA  R+SIA FLLGPKDA VE PPELVDS HPRL+  +T E+YR+LR ST  
Sbjct: 226  VKHRVQCKEAAVRLSIASFLLGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKL 285

Query: 110  RAGESL 93
            +AGE+L
Sbjct: 286  QAGEAL 291


>emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]
          Length = 296

 Score =  324 bits (831), Expect = 2e-86
 Identities = 162/306 (52%), Positives = 206/306 (67%)
 Frame = -3

Query: 1010 EVPTIDLTNFPSDEPKLRQACENLGCFRIIGHGIPASLRTDMKSTVRSLFDLPAHIKRLN 831
            ++P+ID+ +FP    +LR+ACE  GCFR++ H IP SL ++MKS V SL DLP  +KR N
Sbjct: 5    DIPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRN 64

Query: 830  SDIIPGSGYVAPSLANPLYEAFGLYDASSSLDILSFCSNLQASPFQQHTIATYSSKLHAL 651
            +D+I GSGY+APS  NPLYEA GLYD +S   + +FCS L ASP Q+ TI  Y+  +  L
Sbjct: 65   TDVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQEL 124

Query: 650  VIDIANKIAKSIGVPHYSFEHWPCQFRLNKYSFTQETIGSSGVQIHTDSSFLTVLQEXXX 471
             +DI NK+A+++G+    F+ WPCQFR+NKY+FT ET+GS GVQIHTDSSFLT+LQ+   
Sbjct: 125  AMDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQD--- 181

Query: 470  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVPDSFLINLGDIAKVWSNGRLHN 291
                                                P+P + L+NLGDIA VWSNGRL N
Sbjct: 182  ----------------DENVGGLEVMDKSGAFVAVDPMPGTLLVNLGDIATVWSNGRLCN 225

Query: 290  LKHRVQCKEAVERISIALFLLGPKDAPVEPPPELVDSHHPRLYKSITVENYRQLRFSTGS 111
            +KHRVQCKEA  R+SIA FLLGPKDA VE PPELVDS HPRL+  +T E+YR+LR ST  
Sbjct: 226  VKHRVQCKEAAVRLSIASFLLGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKL 285

Query: 110  RAGESL 93
            +AGE+L
Sbjct: 286  QAGEAL 291


>ref|XP_003579963.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Brachypodium
            distachyon]
          Length = 298

 Score =  320 bits (819), Expect = 5e-85
 Identities = 155/311 (49%), Positives = 204/311 (65%), Gaps = 3/311 (0%)
 Frame = -3

Query: 1016 MAEVPTIDLT---NFPSDEPKLRQACENLGCFRIIGHGIPASLRTDMKSTVRSLFDLPAH 846
            M E+P IDL      P +  +LR ACE LGCFR+ GHG+PA+L+ DMK+ +R+LFDLP  
Sbjct: 1    MVEIPVIDLRLAGAAPEESARLRDACERLGCFRVFGHGVPAALQADMKAALRALFDLPDD 60

Query: 845  IKRLNSDIIPGSGYVAPSLANPLYEAFGLYDASSSLDILSFCSNLQASPFQQHTIATYSS 666
             KR N++II GSGYV PS ANPLYEAFGL+DA+   D+ +FC+ L A P  +  + +Y+ 
Sbjct: 61   AKRRNTEIIAGSGYVPPSAANPLYEAFGLWDAAVPADVDAFCARLDAPPHAREAVKSYAE 120

Query: 665  KLHALVIDIANKIAKSIGVPHYSFEHWPCQFRLNKYSFTQETIGSSGVQIHTDSSFLTVL 486
            K+H L++D+A K+A S+G+  + F+ WPCQFR+N+Y++T++T+GSSGVQIHTDS FLTVL
Sbjct: 121  KMHELIVDVAGKVAASLGLEGHPFQDWPCQFRMNRYNYTEDTVGSSGVQIHTDSGFLTVL 180

Query: 485  QEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVPDSFLINLGDIAKVWSN 306
            QE                                       P P SFL+N+GD+   WSN
Sbjct: 181  QE------------------DDCVGGLEVLDPAAGEFVPVDPFPGSFLVNIGDVGTAWSN 222

Query: 305  GRLHNLKHRVQCKEAVERISIALFLLGPKDAPVEPPPELVDSHHPRLYKSITVENYRQLR 126
            GRLH++KHRVQC  AV RISIA+FLL PKD  V  P   VD+ HPR Y++   + YR+LR
Sbjct: 223  GRLHSVKHRVQCVAAVPRISIAMFLLAPKDDRVCTPEAFVDADHPRRYRAFNYDEYRKLR 282

Query: 125  FSTGSRAGESL 93
             STG RAGE+L
Sbjct: 283  LSTGERAGEAL 293


>ref|NP_001140318.1| uncharacterized protein LOC100272363 [Zea mays]
            gi|194698964|gb|ACF83566.1| unknown [Zea mays]
            gi|414586764|tpg|DAA37335.1| TPA: hypothetical protein
            ZEAMMB73_925834 [Zea mays]
          Length = 300

 Score =  318 bits (816), Expect = 1e-84
 Identities = 160/313 (51%), Positives = 204/313 (65%), Gaps = 5/313 (1%)
 Frame = -3

Query: 1016 MAEVPTIDLT---NFPSDEPKLRQACENLGCFRIIGHGIPASLRTDMKSTVRSLFDLPAH 846
            MAE+P IDL    + P +  +LR ACE LGCFR+ GHG PA L  DMK+ VR+LFDLP  
Sbjct: 1    MAEIPVIDLRLAGSSPDESARLRDACERLGCFRVTGHGAPAGLLADMKAAVRALFDLPDD 60

Query: 845  IKRLNSDIIPGSGYVAPSLANPLYEAFGLYDASSSLDILSFCSNLQASPFQQHTIATYSS 666
             KR N+D+IPGSGYVAP  ANPLYEAFGL DA++  D+ +FC+ L A P  + T+ TY+ 
Sbjct: 61   AKRRNADVIPGSGYVAPCPANPLYEAFGLLDAAAPADVDAFCARLDAPPKVRETVKTYAE 120

Query: 665  KLHALVIDIANKIAKS--IGVPHYSFEHWPCQFRLNKYSFTQETIGSSGVQIHTDSSFLT 492
            K+H +++ +A ++A S  +G+  +SF+ WPCQFR+N+Y++TQET+GSSGVQ HTDS FLT
Sbjct: 121  KMHDVIVGVAGELATSLGLGLEEHSFQDWPCQFRINRYNYTQETVGSSGVQTHTDSGFLT 180

Query: 491  VLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVPDSFLINLGDIAKVW 312
            VLQE                                       PV  SFL+N+GD+   W
Sbjct: 181  VLQE------------------DECVGGLEVLDPAAGEFVPVDPVAGSFLVNIGDVGTAW 222

Query: 311  SNGRLHNLKHRVQCKEAVERISIALFLLGPKDAPVEPPPELVDSHHPRLYKSITVENYRQ 132
            SNGRLHN+KHRV+C   V RISIA+FLL PKD  V  P  LVD+ HPR YK    ++YR+
Sbjct: 223  SNGRLHNVKHRVRCVAPVPRISIAMFLLAPKDDRVSAPEALVDAGHPRRYKPFNYDDYRR 282

Query: 131  LRFSTGSRAGESL 93
            LR STG RAGE+L
Sbjct: 283  LRLSTGERAGEAL 295


Top