BLASTX nr result

ID: Dioscorea21_contig00020959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020959
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326721.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002329515.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_004168426.1| PREDICTED: uncharacterized protein LOC101232...    73   3e-11
ref|XP_002281373.1| PREDICTED: uncharacterized protein LOC100267...    73   4e-11
ref|XP_002519827.1| conserved hypothetical protein [Ricinus comm...    70   3e-10

>ref|XP_002326721.1| predicted protein [Populus trichocarpa] gi|222834043|gb|EEE72520.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 51/126 (40%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
 Frame = +1

Query: 133 VFLSRHSSIRRLVGYQQLEED--CSASSXXXXXXXXXXXXFYVDPFVLEKDPFRVLMEMV 306
           V + R    R   GY+ L ED      S            F VDPFVLE+ PFRVL+E V
Sbjct: 8   VSMLRKCCTRSRPGYRPLTEDGFSDLDSPVTVVVGKEMKEFLVDPFVLEESPFRVLIETV 67

Query: 307 RIDG--------DKERKXXXXXXXXXXLFEHLLWLVYNDXXXXXXXXXXXFFQLNMKEII 462
           R D          +E K          LFEH+LWL+YND            FQLN+KEII
Sbjct: 68  RKDNIFYDITSRSREEKKVIFVDVDAILFEHMLWLMYND--------SSSLFQLNLKEII 119

Query: 463 EFYAQD 480
           +FYAQD
Sbjct: 120 DFYAQD 125


>ref|XP_002329515.1| predicted protein [Populus trichocarpa] gi|222870224|gb|EEF07355.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 50/125 (40%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
 Frame = +1

Query: 133 VFLSRHSSIRRLVGYQQLEEDC--SASSXXXXXXXXXXXXFYVDPFVLEKDPFRVLMEMV 306
           V + R    R  +GY+ L ED      S            F VDPFVLE+ PFRVL+E V
Sbjct: 8   VSMLRKCYSRSRLGYRPLTEDGFGDLDSPVTVVVGKERKEFLVDPFVLEESPFRVLIETV 67

Query: 307 RID-------GDKERKXXXXXXXXXXLFEHLLWLVYNDXXXXXXXXXXXFFQLNMKEIIE 465
             D         +E K          LFEH+LWL+YND            FQLN+KEII+
Sbjct: 68  NKDRVFDDTSRSREEKRVIFVDVDAILFEHMLWLMYND--------CSSLFQLNLKEIID 119

Query: 466 FYAQD 480
           FYAQD
Sbjct: 120 FYAQD 124


>ref|XP_004168426.1| PREDICTED: uncharacterized protein LOC101232706 [Cucumis sativus]
          Length = 135

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 48/128 (37%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
 Frame = +1

Query: 145 RHSSIRRLVGYQQLEE----------DCSASSXXXXXXXXXXXXFYVDPFVLEKDPFRVL 294
           R  S +  +GY +L +          D + SS            F VDPFVLE++PFR+L
Sbjct: 16  RRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREFLVDPFVLEENPFRIL 75

Query: 295 MEM-----VRIDGDKERKXXXXXXXXXXLFEHLLWLVYNDXXXXXXXXXXXFFQLNMKEI 459
           +E         DGD +RK          LFEHLLWL+YND            F+LN++EI
Sbjct: 76  IEKGGDDDEDEDGDGKRKRVIFVDVDAILFEHLLWLMYND--------CSSLFKLNVEEI 127

Query: 460 IEFYAQDF 483
           ++FYAQDF
Sbjct: 128 LDFYAQDF 135


>ref|XP_002281373.1| PREDICTED: uncharacterized protein LOC100267676 [Vitis vinifera]
          Length = 124

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 42/88 (47%), Positives = 53/88 (60%), Gaps = 10/88 (11%)
 Frame = +1

Query: 247 FYVDPFVLEKDPFRVLMEMVRID--------GDKER--KXXXXXXXXXXLFEHLLWLVYN 396
           F V+PFVLE+ PFRVL+EMVR +        G+KE+  K          LFEH+LWL+YN
Sbjct: 44  FLVEPFVLEESPFRVLLEMVRKENKEKMGGRGEKEKKEKRVIYVDVDSILFEHMLWLMYN 103

Query: 397 DXXXXXXXXXXXFFQLNMKEIIEFYAQD 480
           D            FQLN++EII+FYAQD
Sbjct: 104 D--------CSSLFQLNLREIIDFYAQD 123


>ref|XP_002519827.1| conserved hypothetical protein [Ricinus communis]
           gi|223540873|gb|EEF42431.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
 Frame = +1

Query: 247 FYVDPFVLEKDPFRVLMEMVRIDG------DKERKXXXXXXXXXXLFEHLLWLVYNDXXX 408
           F VDPFVLE+ PFRVL+E V+         D +++          LFEH+LWL+YND   
Sbjct: 49  FLVDPFVLEESPFRVLIETVKKGSYDHNFDDMKKRRTIFVDVDAILFEHMLWLMYND--- 105

Query: 409 XXXXXXXXFFQLNMKEIIEFYAQDF 483
                    FQLN++EII+FYAQD+
Sbjct: 106 -----CSSLFQLNLEEIIDFYAQDY 125


Top