BLASTX nr result

ID: Dioscorea21_contig00020936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020936
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]    60   1e-07
ref|NP_200479.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Ara...    60   2e-07
ref|NP_001066646.1| Os12g0414500 [Oryza sativa Japonica Group] g...    59   3e-07
gb|EAY82871.1| hypothetical protein OsI_38084 [Oryza sativa Indi...    59   3e-07
ref|XP_002970094.1| hypothetical protein SELMODRAFT_92995 [Selag...    58   7e-07

>emb|CAN82202.1| hypothetical protein VITISV_011129 [Vitis vinifera]
          Length = 597

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = +2

Query: 215 VERFKYSNRVVIKSILGRPDGGRGLAGERVVVGGWVKLFKE 337
           V  FKYSNRVV+++ILGR DGG GL G RVVVGGWV+  KE
Sbjct: 2   VTPFKYSNRVVLRTILGRGDGGLGLLGMRVVVGGWVRSAKE 42


>ref|NP_200479.1| asparaginyl-tRNA synthetase, cytoplasmic 1 [Arabidopsis thaliana]
           gi|20140329|sp|Q9SW96.1|SYNC1_ARATH RecName:
           Full=Asparagine--tRNA ligase, cytoplasmic 1; AltName:
           Full=Asparaginyl-tRNA synthetase 1; Short=AsnRS 1;
           AltName: Full=Protein EMBRYO DEFECTIVE 2755
           gi|5670315|gb|AAD46681.1|AF170909_1 SYNC1 protein
           [Arabidopsis thaliana] gi|10176772|dbj|BAB09886.1| SYNC1
           protein [Arabidopsis thaliana]
           gi|133778862|gb|ABO38771.1| At5g56680 [Arabidopsis
           thaliana] gi|332009412|gb|AED96795.1| asparaginyl-tRNA
           synthetase, cytoplasmic 1 [Arabidopsis thaliana]
          Length = 572

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 40/53 (75%)
 Frame = +2

Query: 167 PSLLLLRVPIQAPMASVERFKYSNRVVIKSILGRPDGGRGLAGERVVVGGWVK 325
           P+  L  V ++   ++V+R ++SNRV+I++IL RPDGG GLAG+ V +GGWVK
Sbjct: 8   PATQLAAVSLENDGSTVQRAQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVK 60


>ref|NP_001066646.1| Os12g0414500 [Oryza sativa Japonica Group]
           gi|77555098|gb|ABA97894.1| tRNA synthetases class II
           family protein, expressed [Oryza sativa Japonica Group]
           gi|113649153|dbj|BAF29665.1| Os12g0414500 [Oryza sativa
           Japonica Group] gi|125579118|gb|EAZ20264.1| hypothetical
           protein OsJ_35868 [Oryza sativa Japonica Group]
          Length = 615

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 215 VERFKYSNRVVIKSILGRPDGGRGLAGERVVVGGWVK 325
           +E FKYS R  ++S++GRPDGG GL GER VVGGWV+
Sbjct: 25  IECFKYSRRATLRSVVGRPDGGAGLVGERAVVGGWVR 61


>gb|EAY82871.1| hypothetical protein OsI_38084 [Oryza sativa Indica Group]
          Length = 615

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 215 VERFKYSNRVVIKSILGRPDGGRGLAGERVVVGGWVK 325
           +E FKYS R  ++S++GRPDGG GL GER VVGGWV+
Sbjct: 25  IECFKYSRRATLRSVVGRPDGGAGLVGERAVVGGWVR 61


>ref|XP_002970094.1| hypothetical protein SELMODRAFT_92995 [Selaginella moellendorffii]
           gi|300162605|gb|EFJ29218.1| hypothetical protein
           SELMODRAFT_92995 [Selaginella moellendorffii]
          Length = 563

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/42 (66%), Positives = 31/42 (73%)
 Frame = +2

Query: 200 APMASVERFKYSNRVVIKSILGRPDGGRGLAGERVVVGGWVK 325
           A  + +E  KYS+RV IKSILGRPDGG GL G  V VGGWVK
Sbjct: 7   ATKSGIEWAKYSHRVFIKSILGRPDGGAGLLGHNVRVGGWVK 48


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