BLASTX nr result

ID: Dioscorea21_contig00020932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020932
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062030.1| Os08g0474700 [Oryza sativa Japonica Group] g...   109   2e-22
gb|EEE68856.1| hypothetical protein OsJ_27655 [Oryza sativa Japo...   109   2e-22
gb|EEC83731.1| hypothetical protein OsI_29579 [Oryza sativa Indi...   109   2e-22
ref|XP_003574621.1| PREDICTED: protein transport protein sec-23-...   103   1e-20
ref|NP_001170490.1| uncharacterized protein LOC100384491 [Zea ma...   100   1e-19

>ref|NP_001062030.1| Os08g0474700 [Oryza sativa Japonica Group]
           gi|42408205|dbj|BAD09341.1| putative SEC23 [Oryza sativa
           Japonica Group] gi|113623999|dbj|BAF23944.1|
           Os08g0474700 [Oryza sativa Japonica Group]
          Length = 763

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/53 (94%), Positives = 53/53 (100%)
 Frame = -3

Query: 231 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDIIFTDDVSFQVFLDHLQRLAVQ 73
           DQYGSQARFLLAKLNPSVTYNSDNPPPPGGD+IFTDDVSF+VF+DHLQRLAVQ
Sbjct: 711 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDVIFTDDVSFEVFMDHLQRLAVQ 763


>gb|EEE68856.1| hypothetical protein OsJ_27655 [Oryza sativa Japonica Group]
          Length = 528

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/53 (94%), Positives = 53/53 (100%)
 Frame = -3

Query: 231 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDIIFTDDVSFQVFLDHLQRLAVQ 73
           DQYGSQARFLLAKLNPSVTYNSDNPPPPGGD+IFTDDVSF+VF+DHLQRLAVQ
Sbjct: 476 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDVIFTDDVSFEVFMDHLQRLAVQ 528


>gb|EEC83731.1| hypothetical protein OsI_29579 [Oryza sativa Indica Group]
          Length = 478

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/53 (94%), Positives = 53/53 (100%)
 Frame = -3

Query: 231 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDIIFTDDVSFQVFLDHLQRLAVQ 73
           DQYGSQARFLLAKLNPSVTYNSDNPPPPGGD+IFTDDVSF+VF+DHLQRLAVQ
Sbjct: 426 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDVIFTDDVSFEVFMDHLQRLAVQ 478


>ref|XP_003574621.1| PREDICTED: protein transport protein sec-23-like [Brachypodium
           distachyon]
          Length = 763

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = -3

Query: 231 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDIIFTDDVSFQVFLDHLQRLAVQ 73
           DQYGSQARFLLAKLNPSVTY+S  PPPPGGD+IFTDDVSFQVF+DHLQRLAVQ
Sbjct: 711 DQYGSQARFLLAKLNPSVTYDSATPPPPGGDVIFTDDVSFQVFMDHLQRLAVQ 763


>ref|NP_001170490.1| uncharacterized protein LOC100384491 [Zea mays]
           gi|238005624|gb|ACR33847.1| unknown [Zea mays]
          Length = 316

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/53 (92%), Positives = 51/53 (96%)
 Frame = -3

Query: 231 DQYGSQARFLLAKLNPSVTYNSDNPPPPGGDIIFTDDVSFQVFLDHLQRLAVQ 73
           DQYGSQARFLLAKLNPSVTYNSDN P PGGD+IFTDDVSFQVF+DHLQRLAVQ
Sbjct: 265 DQYGSQARFLLAKLNPSVTYNSDN-PSPGGDVIFTDDVSFQVFMDHLQRLAVQ 316


Top