BLASTX nr result

ID: Dioscorea21_contig00020923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020923
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303907.1| GRAS family transcription factor [Populus tr...   236   5e-60
ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis v...   229   6e-58
emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]   229   6e-58
ref|XP_003610972.1| GRAS family transcription factor [Medicago t...   228   1e-57
ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vi...   227   3e-57

>ref|XP_002303907.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841339|gb|EEE78886.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  236 bits (602), Expect = 5e-60
 Identities = 136/289 (47%), Positives = 178/289 (61%), Gaps = 1/289 (0%)
 Frame = -3

Query: 866 RGIYLIQLLLRCAEQVSANSFDQTNQCLEHISMLASPTGDTVQRIASYFTHALALRVLSS 687
           RG+ LI LLL CA  V+  S +  N  LEHIS LASP GDT+QRIA+YFT ALA R+L  
Sbjct: 44  RGLCLIHLLLACANHVAVGSVENANISLEHISHLASPDGDTMQRIAAYFTAALADRILKG 103

Query: 686 WRGFYIVLNPPPPTP-AESLAARRHLFDLCPFLRLSYMISNQAIMETMEGEKMIHIIDLS 510
           W G +  LNP   +  +E +  +R  F+LCPFL+LSY+I+N+AI+E+MEGEKM+HIIDL+
Sbjct: 104 WPGLHKALNPKQVSLISEEILVQRLFFELCPFLKLSYVITNEAIIESMEGEKMVHIIDLN 163

Query: 509 FSDPAQWVPLLHLLRDRNEGPPHLRITGINEHKQXXXXXXXXXXXXXXXXDISFQFNPVV 330
            S+PAQW+ LL  L  R EGPPHLRITGI+E K+                DI FQFNP+V
Sbjct: 164 SSEPAQWINLLQTLSARPEGPPHLRITGIHEKKEVLGQMALRLTEEAEKLDIPFQFNPIV 223

Query: 329 SRLDNLDPNLVRIKTGEALAISSVLQLHCLLSSXXXXXXARKGTPFLTSRNSCSIAQFHR 150
           S+L+NLD   +R+KTGEALA+SSVLQLH LL+        ++ +P  +   + S   F R
Sbjct: 224 SKLENLDLGNLRVKTGEALAVSSVLQLHALLA--MDDEMHKRNSP--SGSKNPSSNHFQR 279

Query: 149 IVQMSQGTXXXXXXXXXXLNGYXXXXXXXXXSPFGLPPAPKMERFLSWL 3
           +++M+Q            L            SP  L  +PKM  FL+ L
Sbjct: 280 VLRMNQNRHTLGEWLEKDLVNVYSSSPDSALSPLSLSASPKMSSFLNAL 328


>ref|XP_002267910.1| PREDICTED: scarecrow-like protein 3 [Vitis vinifera]
          Length = 478

 Score =  229 bits (584), Expect = 6e-58
 Identities = 129/248 (52%), Positives = 164/248 (66%), Gaps = 1/248 (0%)
 Frame = -3

Query: 866 RGIYLIQLLLRCAEQVSANSFDQTNQCLEHISMLASPTGDTVQRIASYFTHALALRVLSS 687
           RG+YLI+LL+ CA  V+A S +  N  LEHIS LASP GDTVQRIA+YFT ALA R+L  
Sbjct: 45  RGLYLIRLLVACANHVAAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKG 104

Query: 686 WRGFYIVLNPPPPTP-AESLAARRHLFDLCPFLRLSYMISNQAIMETMEGEKMIHIIDLS 510
           W G +  LN    +  +E +  ++  F+LCPFL+LSY+I+NQAI+E MEGEKM+HIIDL+
Sbjct: 105 WPGLHKALNSTKISSISEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLN 164

Query: 509 FSDPAQWVPLLHLLRDRNEGPPHLRITGINEHKQXXXXXXXXXXXXXXXXDISFQFNPVV 330
             + AQW+ LL  L  R EGPPHLRITGI+E K+                DI FQFNP+V
Sbjct: 165 SFESAQWINLLQSLSARPEGPPHLRITGIHEQKEVLDLMALQLTKEAEKLDIPFQFNPIV 224

Query: 329 SRLDNLDPNLVRIKTGEALAISSVLQLHCLLSSXXXXXXARKGTPFLTSRNSCSIAQFHR 150
           S+L+NLD   +R+KTGEALAISSVLQLH LL+          G     S+N+ S     R
Sbjct: 225 SKLENLDFESLRVKTGEALAISSVLQLHTLLA----IDDEMVGKSPSASKNT-SAVHLQR 279

Query: 149 IVQMSQGT 126
           ++QM+Q T
Sbjct: 280 VLQMNQRT 287


>emb|CAN67001.1| hypothetical protein VITISV_031083 [Vitis vinifera]
          Length = 545

 Score =  229 bits (584), Expect = 6e-58
 Identities = 129/248 (52%), Positives = 164/248 (66%), Gaps = 1/248 (0%)
 Frame = -3

Query: 866 RGIYLIQLLLRCAEQVSANSFDQTNQCLEHISMLASPTGDTVQRIASYFTHALALRVLSS 687
           RG+YLI+LL+ CA  V+A S +  N  LEHIS LASP GDTVQRIA+YFT ALA R+L  
Sbjct: 42  RGLYLIRLLVACANHVAAGSIENANIGLEHISHLASPDGDTVQRIAAYFTEALADRMLKG 101

Query: 686 WRGFYIVLNPPPPTP-AESLAARRHLFDLCPFLRLSYMISNQAIMETMEGEKMIHIIDLS 510
           W G +  LN    +  +E +  ++  F+LCPFL+LSY+I+NQAI+E MEGEKM+HIIDL+
Sbjct: 102 WPGLHKALNSTKISSISEEILVQKLFFELCPFLKLSYVITNQAIIEAMEGEKMVHIIDLN 161

Query: 509 FSDPAQWVPLLHLLRDRNEGPPHLRITGINEHKQXXXXXXXXXXXXXXXXDISFQFNPVV 330
             + AQW+ LL  L  R EGPPHLRITGI+E K+                DI FQFNP+V
Sbjct: 162 SFESAQWINLLQSLSARPEGPPHLRITGIHEQKEVLDLMALQLTKEAEKLDIPFQFNPIV 221

Query: 329 SRLDNLDPNLVRIKTGEALAISSVLQLHCLLSSXXXXXXARKGTPFLTSRNSCSIAQFHR 150
           S+L+NLD   +R+KTGEALAISSVLQLH LL+          G     S+N+ S     R
Sbjct: 222 SKLENLDFESLRVKTGEALAISSVLQLHTLLA----IDDEMVGKSPSASKNT-SAVHLQR 276

Query: 149 IVQMSQGT 126
           ++QM+Q T
Sbjct: 277 VLQMNQRT 284


>ref|XP_003610972.1| GRAS family transcription factor [Medicago truncatula]
           gi|355512307|gb|AES93930.1| GRAS family transcription
           factor [Medicago truncatula]
          Length = 481

 Score =  228 bits (581), Expect = 1e-57
 Identities = 126/262 (48%), Positives = 172/262 (65%), Gaps = 1/262 (0%)
 Frame = -3

Query: 866 RGIYLIQLLLRCAEQVSANSFDQTNQCLEHISMLASPTGDTVQRIASYFTHALALRVLSS 687
           RG+YLI LL+ CA  V++ S +  N  LE IS LA+P GDT+QRIA+YFT ALA R+L +
Sbjct: 49  RGLYLIHLLITCANHVASGSLENANTTLEQISQLATPDGDTMQRIAAYFTEALADRILKT 108

Query: 686 WRGFYIVLNPPPPTP-AESLAARRHLFDLCPFLRLSYMISNQAIMETMEGEKMIHIIDLS 510
           W G +  LN       +E +  ++  F+L PFL+++Y+++NQAI+E+MEGEKM+HIIDL+
Sbjct: 109 WPGLHRALNSTRIIMLSEEIMVQKFFFELFPFLKVAYILTNQAIVESMEGEKMVHIIDLN 168

Query: 509 FSDPAQWVPLLHLLRDRNEGPPHLRITGINEHKQXXXXXXXXXXXXXXXXDISFQFNPVV 330
            ++PAQW+ LL +L  R EGPPHLRITGI++ K+                DI FQFNPV+
Sbjct: 169 AAEPAQWIALLQVLSARPEGPPHLRITGIHQQKEVLEQMGHKLSEEAEKLDIPFQFNPVL 228

Query: 329 SRLDNLDPNLVRIKTGEALAISSVLQLHCLLSSXXXXXXARKGTPFLTSRNSCSIAQFHR 150
           S+L+NLD + +R+KTGEALAISS+LQLH LL+        RK TP L SRNS  +    +
Sbjct: 229 SKLENLDFDKLRVKTGEALAISSILQLHSLLALDDESSSRRK-TPIL-SRNSNGL-HLQK 285

Query: 149 IVQMSQGTXXXXXXXXXXLNGY 84
            + M+Q T          +NGY
Sbjct: 286 AMLMNQNTSLGDLLEKDMVNGY 307


>ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vitis vinifera]
           gi|147775853|emb|CAN60488.1| hypothetical protein
           VITISV_027673 [Vitis vinifera]
          Length = 469

 Score =  227 bits (578), Expect = 3e-57
 Identities = 134/289 (46%), Positives = 178/289 (61%), Gaps = 1/289 (0%)
 Frame = -3

Query: 866 RGIYLIQLLLRCAEQVSANSFDQTNQCLEHISMLASPTGDTVQRIASYFTHALALRVLSS 687
           RG+ LI LLL CA  V++ S +  N  LE IS LAS  GDT+QRIA+YFT ALA R+L +
Sbjct: 40  RGLCLIHLLLTCANHVASGSLENVNIALEQISQLASADGDTMQRIAAYFTEALADRILKT 99

Query: 686 WRGFYIVLNPPPPT-PAESLAARRHLFDLCPFLRLSYMISNQAIMETMEGEKMIHIIDLS 510
           W G +  LN    + P+E +  R+  F+L PFL+++Y+I+N  I+E MEGEKM+HIIDL+
Sbjct: 100 WSGLHKALNSTRISFPSEDILVRKLFFELFPFLKMAYVITNHTIIEAMEGEKMVHIIDLN 159

Query: 509 FSDPAQWVPLLHLLRDRNEGPPHLRITGINEHKQXXXXXXXXXXXXXXXXDISFQFNPVV 330
            ++PAQW+ LL  L  R EGPPHLRITGI+  K+                DI FQFNP+V
Sbjct: 160 SAEPAQWIALLQALSARPEGPPHLRITGIHPQKEVLEQMAHRLTEEAEKLDIPFQFNPIV 219

Query: 329 SRLDNLDPNLVRIKTGEALAISSVLQLHCLLSSXXXXXXARKGTPFLTSRNSCSIAQFHR 150
           S+L+NLD   +R+KTGEALAISSVLQLH  L+        RK +P L S+NS  + Q  R
Sbjct: 220 SKLENLDFEKLRVKTGEALAISSVLQLHSFLA--YDDEFLRKKSP-LASKNSNGV-QLQR 275

Query: 149 IVQMSQGTXXXXXXXXXXLNGYXXXXXXXXXSPFGLPPAPKMERFLSWL 3
           ++Q++Q T          +N Y         SP     +PKM+ FL+ L
Sbjct: 276 VLQLNQ-TTLGELLENDVVNRYSLSPDSASSSPPSFTGSPKMDGFLNAL 323


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